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Carg06111 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06111
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionJHL25P11.1 protein
Genome locationCarg_Chr04:21962941..21963408
RNA-Seq ExpressionCarg06111
SyntenyCarg06111
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602743.1 hypothetical protein SDJN03_07976, partial [Cucurbita argyrosperma subsp. sororia]1.3e-7099.28Show/hide
Query:  MLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDSPESERLRRCEEGGCRSALPEKVGDDGEEDIGLLQRYLD
        MLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDSPESERLRRCEEGGCRSALPEKVGDDGEEDIGLLQRYLD
Subjt:  MLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDSPESERLRRCEEGGCRSALPEKVGDDGEEDIGLLQRYLD

Query:  DQLLLVRSVYECGDCADDLSGDARFCDIENSNLIPLLG
        DQLLLVRSVYECGDCADDLSGDARFCD+ENSNLIPLLG
Subjt:  DQLLLVRSVYECGDCADDLSGDARFCDIENSNLIPLLG

XP_022152501.1 uncharacterized protein LOC111020213 [Momordica charantia]8.5e-5778.71Show/hide
Query:  MSSIPNLPVLLANQPVIMLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDSPESERLRRCEEGGCRSALPEK
        M SI NL V   N PVIMLATAAAAAS WL SSR+RF  +LLCSPLLVPIFCATFP ICAIELCIRLARHR  I LRDSPE ERLRRCEEGGC +ALPE 
Subjt:  MSSIPNLPVLLANQPVIMLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDSPESERLRRCEEGGCRSALPEK

Query:  VGDDGEEDIGLLQRYLDDQLLLVRSVYECGDCADDLSGDARFCDIENSNLIPLLG
           DGEE+IGLLQRYLDDQLLLVRSVYECGD  +D++GDARFCD +NSN+IPLLG
Subjt:  VGDDGEEDIGLLQRYLDDQLLLVRSVYECGDCADDLSGDARFCDIENSNLIPLLG

XP_022962190.1 uncharacterized protein LOC111462719 [Cucurbita moschata]5.5e-80100Show/hide
Query:  MSSIPNLPVLLANQPVIMLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDSPESERLRRCEEGGCRSALPEK
        MSSIPNLPVLLANQPVIMLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDSPESERLRRCEEGGCRSALPEK
Subjt:  MSSIPNLPVLLANQPVIMLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDSPESERLRRCEEGGCRSALPEK

Query:  VGDDGEEDIGLLQRYLDDQLLLVRSVYECGDCADDLSGDARFCDIENSNLIPLLG
        VGDDGEEDIGLLQRYLDDQLLLVRSVYECGDCADDLSGDARFCDIENSNLIPLLG
Subjt:  VGDDGEEDIGLLQRYLDDQLLLVRSVYECGDCADDLSGDARFCDIENSNLIPLLG

XP_022990172.1 uncharacterized protein LOC111487144 [Cucurbita maxima]3.3e-7797.42Show/hide
Query:  MSSIPNLPVLLANQPVIMLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDSPESERLRRCEEGGCRSALPEK
        MSSIP LPVLLANQPVIMLATAAAAASFWLR SRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDSPESERLRRCEEGGCRSALPEK
Subjt:  MSSIPNLPVLLANQPVIMLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDSPESERLRRCEEGGCRSALPEK

Query:  VGDDGEEDIGLLQRYLDDQLLLVRSVYECGDCADDLSGDARFCDIENSNLIPLLG
        VGDDGEEDIGLL RYLDDQLLLVRSVY CGDCADDLSGDARFCDIENSNLIPLLG
Subjt:  VGDDGEEDIGLLQRYLDDQLLLVRSVYECGDCADDLSGDARFCDIENSNLIPLLG

XP_023550754.1 uncharacterized protein LOC111808798 [Cucurbita pepo subsp. pepo]6.0e-7999.35Show/hide
Query:  MSSIPNLPVLLANQPVIMLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDSPESERLRRCEEGGCRSALPEK
        MSSIPNLPVLLANQ VIMLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDSPESERLRRCEEGGCRSALPEK
Subjt:  MSSIPNLPVLLANQPVIMLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDSPESERLRRCEEGGCRSALPEK

Query:  VGDDGEEDIGLLQRYLDDQLLLVRSVYECGDCADDLSGDARFCDIENSNLIPLLG
        VGDDGEEDIGLLQRYLDDQLLLVRSVYECGDCADDLSGDARFCDIENSNLIPLLG
Subjt:  VGDDGEEDIGLLQRYLDDQLLLVRSVYECGDCADDLSGDARFCDIENSNLIPLLG

TrEMBL top hitse value%identityAlignment
A0A540M3W3 Uncharacterized protein8.9e-2852.86Show/hide
Query:  MLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDS-PESERLRRCEEG-GCRSALPEKVGDDGEEDIGLLQRY
        MLA A+++++ WLR+ R R+ +LLLCSP+L+P  CA FP++CA ELC+RL R RI+    ++  E ER+RRCEEG G  SA      +DG+E++GLLQRY
Subjt:  MLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDS-PESERLRRCEEG-GCRSALPEKVGDDGEEDIGLLQRY

Query:  LDDQLLLVRSVYECG-DCADDLSGDARFCDIENSNLIPLL
        L+DQLLLV SVY+CG D +DDL  +    D  +SN  PLL
Subjt:  LDDQLLLVRSVYECG-DCADDLSGDARFCDIENSNLIPLL

A0A6J1DHX6 uncharacterized protein LOC1110202134.1e-5778.71Show/hide
Query:  MSSIPNLPVLLANQPVIMLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDSPESERLRRCEEGGCRSALPEK
        M SI NL V   N PVIMLATAAAAAS WL SSR+RF  +LLCSPLLVPIFCATFP ICAIELCIRLARHR  I LRDSPE ERLRRCEEGGC +ALPE 
Subjt:  MSSIPNLPVLLANQPVIMLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDSPESERLRRCEEGGCRSALPEK

Query:  VGDDGEEDIGLLQRYLDDQLLLVRSVYECGDCADDLSGDARFCDIENSNLIPLLG
           DGEE+IGLLQRYLDDQLLLVRSVYECGD  +D++GDARFCD +NSN+IPLLG
Subjt:  VGDDGEEDIGLLQRYLDDQLLLVRSVYECGDCADDLSGDARFCDIENSNLIPLLG

A0A6J1HEC7 uncharacterized protein LOC1114627192.6e-80100Show/hide
Query:  MSSIPNLPVLLANQPVIMLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDSPESERLRRCEEGGCRSALPEK
        MSSIPNLPVLLANQPVIMLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDSPESERLRRCEEGGCRSALPEK
Subjt:  MSSIPNLPVLLANQPVIMLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDSPESERLRRCEEGGCRSALPEK

Query:  VGDDGEEDIGLLQRYLDDQLLLVRSVYECGDCADDLSGDARFCDIENSNLIPLLG
        VGDDGEEDIGLLQRYLDDQLLLVRSVYECGDCADDLSGDARFCDIENSNLIPLLG
Subjt:  VGDDGEEDIGLLQRYLDDQLLLVRSVYECGDCADDLSGDARFCDIENSNLIPLLG

A0A6J1JHX7 uncharacterized protein LOC1114871441.6e-7797.42Show/hide
Query:  MSSIPNLPVLLANQPVIMLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDSPESERLRRCEEGGCRSALPEK
        MSSIP LPVLLANQPVIMLATAAAAASFWLR SRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDSPESERLRRCEEGGCRSALPEK
Subjt:  MSSIPNLPVLLANQPVIMLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDSPESERLRRCEEGGCRSALPEK

Query:  VGDDGEEDIGLLQRYLDDQLLLVRSVYECGDCADDLSGDARFCDIENSNLIPLLG
        VGDDGEEDIGLL RYLDDQLLLVRSVY CGDCADDLSGDARFCDIENSNLIPLLG
Subjt:  VGDDGEEDIGLLQRYLDDQLLLVRSVYECGDCADDLSGDARFCDIENSNLIPLLG

A0A6P4AVV5 uncharacterized protein LOC1074345309.9e-2759.52Show/hide
Query:  MLATAAAAASF--WLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLA-RHRIRICLRDSPE-SERLRRCEEGGCRSALPEKVGDDGEEDIGLLQ
        MLA AAAA+S   WLR+ RSR+  L LC P+L+P  CATFP++CA ELC+RL  R R+R   RDS E  ERLRRCEEG C +AL E      EE++GLLQ
Subjt:  MLATAAAAASF--WLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLA-RHRIRICLRDSPE-SERLRRCEEGGCRSALPEKVGDDGEEDIGLLQ

Query:  RYLDDQLLLVRSVYECGDCADDLSGD
        RYL+DQL+LV SVY+CGD  DD+  D
Subjt:  RYLDDQLLLVRSVYECGDCADDLSGD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G35430.1 unknown protein6.5e-2353.04Show/hide
Query:  FWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRL-ARHRIRICLRDSPESERLRRCEEG-GCRSALPEKVGDDGEEDIGLLQRYLDDQLLLVRS
        FWLR+ RSRF   LLCSPLL+PI CA+ PI+CA+E+  RL +RH          +  RLRRCEEG GC        G D  E+ GLLQRYL+DQL+LVRS
Subjt:  FWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRL-ARHRIRICLRDSPESERLRRCEEG-GCRSALPEKVGDDGEEDIGLLQRYLDDQLLLVRS

Query:  VYECGDCADDLSGDA
        VY+CG+   D   D+
Subjt:  VYECGDCADDLSGDA

AT4G09170.1 unknown protein1.8e-0935.54Show/hide
Query:  IMLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIR--------ICLRDSPESERLRRCEEG-GCRSALPEKVGDDGEE
        +ML  A+  ++ W     SR   L+LCSPLL    C + P++CA+E+  RL    ++          L D  ++ RLR+CEEG G +        +D  E
Subjt:  IMLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIR--------ICLRDSPESERLRRCEEG-GCRSALPEKVGDDGEE

Query:  DIGLLQRYLDDQLLLVRSVYE
        + GLL RYLD+QL L R++++
Subjt:  DIGLLQRYLDDQLLLVRSVYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCGATCCCCAACCTTCCGGTTTTACTTGCAAATCAGCCCGTCATCATGTTAGCCACCGCCGCTGCCGCCGCCTCTTTTTGGCTTCGTTCCAGTCGGAGCCGCTT
TTTCATTCTCTTGCTTTGTTCCCCCCTCCTCGTTCCCATTTTCTGCGCTACTTTCCCCATCATCTGTGCCATAGAGCTCTGCATCCGCCTTGCTCGTCACAGGATAAGGA
TATGTCTTCGCGATTCCCCAGAAAGCGAACGGTTGCGGCGATGTGAGGAAGGCGGCTGCAGATCAGCGCTCCCGGAGAAGGTTGGCGATGACGGGGAGGAGGATATCGGC
CTATTGCAGAGGTACTTGGATGATCAGCTACTGCTTGTTCGATCTGTTTATGAATGTGGAGATTGTGCCGACGACTTAAGTGGGGATGCTCGATTTTGTGACATTGAAAA
TAGCAATTTGATTCCACTATTAGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCGATCCCCAACCTTCCGGTTTTACTTGCAAATCAGCCCGTCATCATGTTAGCCACCGCCGCTGCCGCCGCCTCTTTTTGGCTTCGTTCCAGTCGGAGCCGCTT
TTTCATTCTCTTGCTTTGTTCCCCCCTCCTCGTTCCCATTTTCTGCGCTACTTTCCCCATCATCTGTGCCATAGAGCTCTGCATCCGCCTTGCTCGTCACAGGATAAGGA
TATGTCTTCGCGATTCCCCAGAAAGCGAACGGTTGCGGCGATGTGAGGAAGGCGGCTGCAGATCAGCGCTCCCGGAGAAGGTTGGCGATGACGGGGAGGAGGATATCGGC
CTATTGCAGAGGTACTTGGATGATCAGCTACTGCTTGTTCGATCTGTTTATGAATGTGGAGATTGTGCCGACGACTTAAGTGGGGATGCTCGATTTTGTGACATTGAAAA
TAGCAATTTGATTCCACTATTAGGCTGA
Protein sequenceShow/hide protein sequence
MSSIPNLPVLLANQPVIMLATAAAAASFWLRSSRSRFFILLLCSPLLVPIFCATFPIICAIELCIRLARHRIRICLRDSPESERLRRCEEGGCRSALPEKVGDDGEEDIG
LLQRYLDDQLLLVRSVYECGDCADDLSGDARFCDIENSNLIPLLG