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Carg06119 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06119
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionmultisubstrate pseudouridine synthase 7 isoform X1
Genome locationCarg_Chr04:22021535..22026855
RNA-Seq ExpressionCarg06119
SyntenyCarg06119
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590278.1 hypothetical protein SDJN03_15701, partial [Cucurbita argyrosperma subsp. sororia]3.9e-10100Show/hide
Query:  MAGYGTSESYASEIELFISLAGDSDAGILEAFLNPMN
        MAGYGTSESYASEIELFISLAGDSDAGILEAFLNPMN
Subjt:  MAGYGTSESYASEIELFISLAGDSDAGILEAFLNPMN
KAG7033437.1 hypothetical protein SDJN02_07493 [Cucurbita argyrosperma subsp. argyrosperma]6.4e-21100Show/hide
Query:  MAGYGTSESYASEIELFISLAGDSDAGILEAFLNPMNAAAAIPPMAPAIAADLGPEAAL
        MAGYGTSESYASEIELFISLAGDSDAGILEAFLNPMNAAAAIPPMAPAIAADLGPEAAL
Subjt:  MAGYGTSESYASEIELFISLAGDSDAGILEAFLNPMNAAAAIPPMAPAIAADLGPEAAL
TrEMBL top hitse value%identityAlignment
A0A6J1KIA3 putative pseudouridine synthase C1A4.09 isoform X25.8e-0473.68Show/hide
Query:  MAGYGTSESYASEIELFISLAGDSDAGILEAFLNPMNA
        M G+GTSESYASEIELF SLAG SDA ILEAFL  +++
Subjt:  MAGYGTSESYASEIELFISLAGDSDAGILEAFLNPMNA
A0A6J1KMR0 multisubstrate pseudouridine synthase 7 isoform X15.8e-0473.68Show/hide
Query:  MAGYGTSESYASEIELFISLAGDSDAGILEAFLNPMNA
        M G+GTSESYASEIELF SLAG SDA ILEAFL  +++
Subjt:  MAGYGTSESYASEIELFISLAGDSDAGILEAFLNPMNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGCTACGGTACAAGCGAGAGCTATGCTTCTGAAATTGAATTGTTTATATCGCTTGCTGGTGATTCTGATGCTGGGATTTTGGAAGCTTTTCTTAACCCGATGAA
CGCTGCAGCAGCAATCCCTCCAATGGCACCGGCGATAGCGGCTGACCTTGGCCCGGAAGCCGCCTTGTAA
mRNA sequenceShow/hide mRNA sequence
TGGTATTATTCATTTTCGATAAACATTTTCAAAAAATCAACCCAAAACGGATAAGATTTTTCCATCCTTGCCCATCTCGAGAAACCCTGATGGGGTGGCACCATCCAGGA
CTCCAGGAGCGTCGTACATCAATACCCTTCACCGTTTCACCACTCCCAAATCCACCAATAGAGCTTATTCGATTACAGTCATGGCCACGCCAATCCATAGCCGAATCAGA
TGTTGGCTTACGGTGTTAAGTATCTTCCGAATTGATAGCAAAATCTGAACGAACAATAACAGAGGGTACCAATGGCAGGCTACGGTACAAGCGAGAGCTATGCTTCTGAA
ATTGAATTGTTTATATCGCTTGCTGGTGATTCTGATGCTGGGATTTTGGAAGCTTTTCTTAACCCGATGAACGCTGCAGCAGCAATCCCTCCAATGGCACCGGCGATAGC
GGCTGACCTTGGCCCGGAAGCCGCCTTGTAA
Protein sequenceShow/hide protein sequence
MAGYGTSESYASEIELFISLAGDSDAGILEAFLNPMNAAAAIPPMAPAIAADLGPEAAL