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Carg06128 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06128
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioninactive protein RESTRICTED TEV MOVEMENT 2-like
Genome locationCarg_Chr04:22064724..22065863
RNA-Seq ExpressionCarg06128
SyntenyCarg06128
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone
IPR045045 - Small heat shock protein RTM2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590270.1 Inactive protein RESTRICTED TEV MOVEMENT 2, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2361.39Show/hide
Query:  MDPSSTSFQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKASSEG
        MD SS +FQ+I PQI++++YP SHVLT+ ++DFT NDLKVQVT   KLRI+G+RR+  GK + F KEIDIPAD D  KISAK+E GIL V QP K S+  
Subjt:  MDPSSTSFQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKASSEG

Query:  S
        S
Subjt:  S

KAG6590271.1 Heat shock protein beta-11, partial [Cucurbita argyrosperma subsp. sororia]4.6e-5690.4Show/hide
Query:  MDPSSTSFQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKASSEG
        MDPSSTSFQ+I PQISFKYYPGSHVLT++VQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQP KAS+EG
Subjt:  MDPSSTSFQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKASSEG

Query:  SGCGGRGEWLRRNMVNLALWAMKAF
        SGC  RGEWLRRNMVNLAL A   F
Subjt:  SGCGGRGEWLRRNMVNLALWAMKAF

KAG7033445.1 hypothetical protein SDJN02_07501, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-93100Show/hide
Query:  MDPSSTSFQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKASSEG
        MDPSSTSFQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKASSEG
Subjt:  MDPSSTSFQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKASSEG

Query:  SGCGGRGEWLRRNMVNLALWAMKAFREGSGWLGRGGWLRRNMVNMALGAAVFVIVYLCCFCHCVSQSYKQ
        SGCGGRGEWLRRNMVNLALWAMKAFREGSGWLGRGGWLRRNMVNMALGAAVFVIVYLCCFCHCVSQSYKQ
Subjt:  SGCGGRGEWLRRNMVNLALWAMKAFREGSGWLGRGGWLRRNMVNMALGAAVFVIVYLCCFCHCVSQSYKQ

XP_022960897.1 heat shock protein beta-11-like [Cucurbita moschata]2.3e-3986.6Show/hide
Query:  MDPSSTSFQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKAS
        MDPSS +FQ+ITPQI  KYYPG HVLT+ VQDFTSNDLKVQVTC LKLRISG+RRVNCGKCI FRKEIDIPADVDI+KISAK+EGGILSVRQPMKAS
Subjt:  MDPSSTSFQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKAS

XP_023533468.1 uncharacterized protein LOC111795344 [Cucurbita pepo subsp. pepo]1.2e-4366.25Show/hide
Query:  MDPSSTSFQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKASSEG
        MD SS +F +I PQI+ KYYPGSHVLT+ VQDFTSNDLKVQVT  LKLRI+G+RR+NCGKCI FRKEIDIPADVDI KISAK E GIL VRQPMKAS++G
Subjt:  MDPSSTSFQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKASSEG

Query:  SGCGGRGEWLRRNMVNLALWAMKAFREGSGWLGRGGWLRRNMVNMALGAA---VFVIVYL
             RGEWL            KA  +G     RG WLRRNMVN+ALG A    FVIVYL
Subjt:  SGCGGRGEWLRRNMVNLALWAMKAFREGSGWLGRGGWLRRNMVNMALGAA---VFVIVYL

TrEMBL top hitse value%identityAlignment
A0A5A7UKP9 Inactive protein RESTRICTED TEV MOVEMENT 2-like3.7e-1953.4Show/hide
Query:  MDPSST--SFQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKASS
        MDPSS+  +FQ   P+  + ++P SHVL + +  F SN LKVQVT   KLR+SG+R++  GK + F KEIDIPAD D  KISAK+E GIL V+QP K S+
Subjt:  MDPSST--SFQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKASS

Query:  EGS
          S
Subjt:  EGS

A0A5D3CF67 Inactive protein RESTRICTED TEV MOVEMENT 2-like1.7e-1954.37Show/hide
Query:  MDPSST--SFQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKASS
        MDPSS+  +FQ   P+  + ++P SHVL + +  F SN LKVQVT   KLRISG+R++  GK + F KEIDIPAD D  KISAK+E GIL V+QP K S+
Subjt:  MDPSST--SFQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKASS

Query:  EGS
          S
Subjt:  EGS

A0A6J1H8P0 heat shock protein beta-11-like1.1e-3986.6Show/hide
Query:  MDPSSTSFQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKAS
        MDPSS +FQ+ITPQI  KYYPG HVLT+ VQDFTSNDLKVQVTC LKLRISG+RRVNCGKCI FRKEIDIPADVDI+KISAK+EGGILSVRQPMKAS
Subjt:  MDPSSTSFQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKAS

A0A6J1HCF0 uncharacterized protein LOC1114615575.6e-2360.4Show/hide
Query:  MDPSSTSFQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKASSEG
        MD SS +FQ+I PQI++++YP SHVLT+ ++DFT NDLKVQVT   KLRI+G+RR+  GK + F KEI IPAD D  KISAK+E GIL V QP K S+  
Subjt:  MDPSSTSFQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKASSEG

Query:  S
        S
Subjt:  S

A0A6J1HCF0 uncharacterized protein LOC1114615574.9e-0341.25Show/hide
Query:  KISAKVEG-GILSVRQPMKASSEGSGCGGRGEWLRRNMVNLALWAMKAFREGSGWLGRGGWLRRNMVNMALGAAVFVIVY
        K+  +VEG G        K   +G   GG G   +   V           EGS W+ RG WLR NMVN+ALGAAVFV+ Y
Subjt:  KISAKVEG-GILSVRQPMKASSEGSGCGGRGEWLRRNMVNLALWAMKAFREGSGWLGRGGWLRRNMVNMALGAAVFVIVY

A0A6J1HCF0 uncharacterized protein LOC1114615572.8e-2246.2Show/hide
Query:  MDPSSTSFQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKASSEG
        MD S  S+++  P +   ++P SH+L +++  FT N+L+V+VT   KLRISG+RR+  GK + F  EIDIP D D  KISA+ E GIL V QP K S+  
Subjt:  MDPSSTSFQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKASSEG

Query:  SGCGGRGEWLRRNMVNLALWAMKAFREGSGWLGRGGWLRRNMVNMALG-AAVFVIVYL
        S                +     A   G G + RG WLRRNMVN+ALG AAVFVIVYL
Subjt:  SGCGGRGEWLRRNMVNLALWAMKAFREGSGWLGRGGWLRRNMVNMALG-AAVFVIVYL

SwissProt top hitse value%identityAlignment
A5JV83 Heat shock protein beta-116.6e-0533.33Show/hide
Query:  TSFQNITPQISFKYYPGSH-VLTINVQDFTSNDLKVQVTCALKLRISGK--RRVNCGK------CIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKA
        T+F+ I+ Q+  +   GSH  LT++ QDF+  +L V+     KLR+SGK  ++ + GK      C  FR+E D+P DV+   +S  +  G L ++ P + 
Subjt:  TSFQNITPQISFKYYPGSH-VLTINVQDFTSNDLKVQVTCALKLRISGK--RRVNCGK------CIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKA

Query:  SS
        ++
Subjt:  SS

Arabidopsis top hitse value%identityAlignment
AT2G27140.1 HSP20-like chaperones superfamily protein2.8e-1141.86Show/hide
Query:  FQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQP
        +    P  ++K   G   LTI +  F    LKVQVT   KLR+ G R     K I FRKE  IP ++D+  +SAK EG  L VR P
Subjt:  FQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQP

AT5G20970.1 HSP20-like chaperones superfamily protein2.9e-0834.88Show/hide
Query:  FQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQP
        +Q   P   +   P + VL  ++  F    LKV VT   KLR++G+R     K I F +EI +P  VDI  +SA  +   L +R P
Subjt:  FQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCTTCGTCCACAAGCTTTCAGAATATTACGCCTCAAATCAGTTTCAAATATTATCCCGGGTCTCATGTTCTTACCATCAACGTCCAAGATTTCACGAGCAACGA
TCTGAAAGTTCAGGTGACATGCGCCTTAAAGTTGAGGATCAGCGGCAAACGGAGGGTGAACTGCGGCAAGTGTATCGGATTCCGCAAGGAAATCGATATTCCAGCGGACG
TCGATATTTTCAAGATCTCTGCCAAGGTGGAGGGAGGCATACTCTCAGTGAGGCAGCCCATGAAAGCCTCCAGTGAAGGGAGTGGATGTGGGGGAAGAGGAGAATGGTTG
AGGAGAAACATGGTGAATTTGGCTCTATGGGCCATGAAAGCCTTCAGGGAAGGGAGTGGATGGTTGGGAAGAGGAGGATGGTTGAGGAGAAACATGGTGAATATGGCTCT
AGGGGCTGCTGTTTTCGTCATTGTGTATCTCTGCTGTTTTTGTCATTGTGTATCTCAATCATACAAACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCTTCGTCCACAAGCTTTCAGAATATTACGCCTCAAATCAGTTTCAAATATTATCCCGGGTCTCATGTTCTTACCATCAACGTCCAAGATTTCACGAGCAACGA
TCTGAAAGTTCAGGTGACATGCGCCTTAAAGTTGAGGATCAGCGGCAAACGGAGGGTGAACTGCGGCAAGTGTATCGGATTCCGCAAGGAAATCGATATTCCAGCGGACG
TCGATATTTTCAAGATCTCTGCCAAGGTGGAGGGAGGCATACTCTCAGTGAGGCAGCCCATGAAAGCCTCCAGTGAAGGGAGTGGATGTGGGGGAAGAGGAGAATGGTTG
AGGAGAAACATGGTGAATTTGGCTCTATGGGCCATGAAAGCCTTCAGGGAAGGGAGTGGATGGTTGGGAAGAGGAGGATGGTTGAGGAGAAACATGGTGAATATGGCTCT
AGGGGCTGCTGTTTTCGTCATTGTGTATCTCTGCTGTTTTTGTCATTGTGTATCTCAATCATACAAACAATGA
Protein sequenceShow/hide protein sequence
MDPSSTSFQNITPQISFKYYPGSHVLTINVQDFTSNDLKVQVTCALKLRISGKRRVNCGKCIGFRKEIDIPADVDIFKISAKVEGGILSVRQPMKASSEGSGCGGRGEWL
RRNMVNLALWAMKAFREGSGWLGRGGWLRRNMVNMALGAAVFVIVYLCCFCHCVSQSYKQ