CuGenDBv2

Gene ID	Carg06151
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	folate-biopterin transporter 1, chloroplastic-like
Genome location	Carg_Chr06:8796616..8797404
RNA-Seq Expression	Carg06151
Synteny	Carg06151
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR039309 - Biopterin transporter family

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7028896.1 Folate-biopterin transporter 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.2e-43

100

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Query:  MSVAVPLSQMDVDDESLPNSWSSNDREGMLSYGGQNTAHKKKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDFIDPAE
        MSVAVPLSQMDVDDESLPNSWSSNDREGMLSYGGQNTAHKKKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDFIDPAE
Subjt:  MSVAVPLSQMDVDDESLPNSWSSNDREGMLSYGGQNTAHKKKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDFIDPAE

XP_022934360.1 folate-biopterin transporter 1, chloroplastic-like [Cucurbita moschata]

6.6e-41

96.77

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Query:  MSVAVPLSQMDVDDESLPNSWSSNDREGMLSYGGQNTAHKKKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDF-IDPAE
        MSVAVPLSQMDVDDESLPNSWSSNDREGMLSYGGQNTAHKKKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDD  +DPAE
Subjt:  MSVAVPLSQMDVDDESLPNSWSSNDREGMLSYGGQNTAHKKKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDF-IDPAE

XP_022975484.1 folate-biopterin transporter 1, chloroplastic-like isoform X4 [Cucurbita maxima]

6.2e-39

93.55

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Query:  MSVAVPLSQMDVDDESLPNSWSSNDREGMLSYGGQNTAHKKKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDF-IDPAE
        MSVAVPLSQMDVDDESLPNSWSSNDREGM SY GQNTAHKKKYYPS IKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDD  +DPAE
Subjt:  MSVAVPLSQMDVDDESLPNSWSSNDREGMLSYGGQNTAHKKKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDF-IDPAE

XP_022975485.1 folate-biopterin transporter 1, chloroplastic-like isoform X5 [Cucurbita maxima]

6.2e-39

93.55

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Query:  MSVAVPLSQMDVDDESLPNSWSSNDREGMLSYGGQNTAHKKKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDF-IDPAE
        MSVAVPLSQMDVDDESLPNSWSSNDREGM SY GQNTAHKKKYYPS IKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDD  +DPAE
Subjt:  MSVAVPLSQMDVDDESLPNSWSSNDREGMLSYGGQNTAHKKKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDF-IDPAE

XP_023540227.1 folate-biopterin transporter 1, chloroplastic-like [Cucurbita pepo subsp. pepo]

3.6e-39

93.55

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Query:  MSVAVPLSQMDVDDESLPNSWSSNDREGMLSYGGQNTAHKKKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDF-IDPAE
        MSVAVPLSQMDVDDES PNSWSSNDREGMLSYGGQNTAH KKYYPS IKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDD  +DPAE
Subjt:  MSVAVPLSQMDVDDESLPNSWSSNDREGMLSYGGQNTAHKKKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDF-IDPAE

TrEMBL top hits

e value

%identity

Alignment

A0A6J1F7G4 folate-biopterin transporter 1, chloroplastic-like

3.2e-41

96.77

Show/hide

Query:  MSVAVPLSQMDVDDESLPNSWSSNDREGMLSYGGQNTAHKKKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDF-IDPAE
        MSVAVPLSQMDVDDESLPNSWSSNDREGMLSYGGQNTAHKKKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDD  +DPAE
Subjt:  MSVAVPLSQMDVDDESLPNSWSSNDREGMLSYGGQNTAHKKKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDF-IDPAE

A0A6J1IEC8 folate-biopterin transporter 1, chloroplastic-like isoform X2

3.0e-39

93.55

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Query:  MSVAVPLSQMDVDDESLPNSWSSNDREGMLSYGGQNTAHKKKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDF-IDPAE
        MSVAVPLSQMDVDDESLPNSWSSNDREGM SY GQNTAHKKKYYPS IKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDD  +DPAE
Subjt:  MSVAVPLSQMDVDDESLPNSWSSNDREGMLSYGGQNTAHKKKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDF-IDPAE

A0A6J1IGU6 folate-biopterin transporter 1, chloroplastic-like isoform X5

3.0e-39

93.55

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Query:  MSVAVPLSQMDVDDESLPNSWSSNDREGMLSYGGQNTAHKKKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDF-IDPAE
        MSVAVPLSQMDVDDESLPNSWSSNDREGM SY GQNTAHKKKYYPS IKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDD  +DPAE
Subjt:  MSVAVPLSQMDVDDESLPNSWSSNDREGMLSYGGQNTAHKKKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDF-IDPAE

A0A6J1IJB9 folate-biopterin transporter 1, chloroplastic-like isoform X3

3.0e-39

93.55

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Query:  MSVAVPLSQMDVDDESLPNSWSSNDREGMLSYGGQNTAHKKKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDF-IDPAE
        MSVAVPLSQMDVDDESLPNSWSSNDREGM SY GQNTAHKKKYYPS IKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDD  +DPAE
Subjt:  MSVAVPLSQMDVDDESLPNSWSSNDREGMLSYGGQNTAHKKKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDF-IDPAE

A0A6J1IKN0 folate-biopterin transporter 1, chloroplastic-like isoform X4

3.0e-39

93.55

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Query:  MSVAVPLSQMDVDDESLPNSWSSNDREGMLSYGGQNTAHKKKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDF-IDPAE
        MSVAVPLSQMDVDDESLPNSWSSNDREGM SY GQNTAHKKKYYPS IKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDD  +DPAE
Subjt:  MSVAVPLSQMDVDDESLPNSWSSNDREGMLSYGGQNTAHKKKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDF-IDPAE

SwissProt top hits

e value

%identity

Alignment

Q9SKZ5 Folate-biopterin transporter 1, chloroplastic

1.4e-14

56.32

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Query:  SQMDVDDESLPNSWSSNDREGMLSYGGQNTAHK-KKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDF-IDPAE
        S++ V +    N+    DR+   S   Q    K +    S IKF+GV+LSPDNVAVAMVYFVQGVL LARLAVSFYLKDD  +DPAE
Subjt:  SQMDVDDESLPNSWSSNDREGMLSYGGQNTAHK-KKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDF-IDPAE

Arabidopsis top hits

e value

%identity

Alignment

AT2G32040.1 Major facilitator superfamily protein

1.0e-15

56.32

Show/hide

Query:  SQMDVDDESLPNSWSSNDREGMLSYGGQNTAHK-KKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDF-IDPAE
        S++ V +    N+    DR+   S   Q    K +    S IKF+GV+LSPDNVAVAMVYFVQGVL LARLAVSFYLKDD  +DPAE
Subjt:  SQMDVDDESLPNSWSSNDREGMLSYGGQNTAHK-KKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDF-IDPAE

Sequences

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CDS sequence

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ATGTCCGTCGCTGTTCCCTTGTCGCAAATGGACGTGGATGATGAGTCTTTGCCTAATTCTTGGAGTAGTAATGACAGGGAAGGGATGCTCTCATACGGTGGTCAAAATAC
GGCTCATAAGAAGAAATATTATCCAAGCGCCATTAAATTTTTTGGGGTGGACCTATCCCCAGATAATGTGGCTGTCGCCATGGTCTATTTTGTTCAAGGGGTTTTAGCCT
TAGCAAGGCTTGCTGTTAGTTTTTACTTAAAGGATGACTTCATAGATCCGGCAGAG

mRNA sequence

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TCCTTCCTTCAAGATACGTCGTAAGCTGGCCCTTCTTGGCGCTGGAACATTCAACTGGAGTTGACGTTCGCGGTCGCTGAAAGAGGACATGTCCGTCGCTGTTCCCTTGT
CGCAAATGGACGTGGATGATGAGTCTTTGCCTAATTCTTGGAGTAGTAATGACAGGGAAGGGATGCTCTCATACGGTGGTCAAAATACGGCTCATAAGAAGAAATATTAT
CCAAGCGCCATTAAATTTTTTGGGGTGGACCTATCCCCAGATAATGTGGCTGTCGCCATGGTCTATTTTGTTCAAGGGGTTTTAGCCTTAGCAAGGCTTGCTGTTAGTTT
TTACTTAAAGGATGACTTCATAGATCCGGCAGAG

Protein sequence

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MSVAVPLSQMDVDDESLPNSWSSNDREGMLSYGGQNTAHKKKYYPSAIKFFGVDLSPDNVAVAMVYFVQGVLALARLAVSFYLKDDFIDPAE

Carg06151 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome