CuGenDBv2

Gene ID	Carg06189
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	rRNA-processing protein EFG1
Genome location	Carg_Chr06:8599445..8603216
RNA-Seq Expression	Carg06189
Synteny	Carg06189
Gene Ontology terms	GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process) GO:0005730 - nucleolus (cellular component) GO:0030688 - preribosome, small subunit precursor (cellular component)
InterPro domains	IPR019310 - rRNA-processing protein Efg1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022946500.1 rRNA-processing protein EFG1 isoform X1 [Cucurbita moschata]

1.6e-164

100

Show/hide

Query:  MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS
        EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS
Subjt:  EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS

Query:  SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR
        SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR
Subjt:  SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR

Query:  GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA
        GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA
Subjt:  GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA

XP_022946509.1 rRNA-processing protein EFG1 isoform X2 [Cucurbita moschata]

5.5e-162

99.4

Show/hide

Query:  MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS
        EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS
Subjt:  EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS

Query:  SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR
        SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNH  QQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR
Subjt:  SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR

Query:  GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA
        GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA
Subjt:  GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA

XP_022946517.1 rRNA-processing protein EFG1 isoform X3 [Cucurbita moschata]

7.2e-162

99.4

Show/hide

Query:  MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS
        EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLE  GSEDDGLLDMSEDDFFVSGSS
Subjt:  EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS

Query:  SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR
        SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR
Subjt:  SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR

Query:  GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA
        GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA
Subjt:  GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA

XP_022946524.1 rRNA-processing protein EFG1 isoform X4 [Cucurbita moschata]

2.1e-161

99.1

Show/hide

Query:  MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS
        EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS
Subjt:  EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS

Query:  SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR
        SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNH   QISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR
Subjt:  SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR

Query:  GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA
        GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA
Subjt:  GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA

XP_022974416.1 rRNA-processing protein EFG1 isoform X1 [Cucurbita maxima]

3.8e-163

99.4

Show/hide

Query:  MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS
        EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS
Subjt:  EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS

Query:  SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR
        SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFK R
Subjt:  SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR

Query:  GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA
        GSSNS TGHSSNISSNSDAHKPRRKRRPKKKKQQA
Subjt:  GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA

TrEMBL top hits

e value

%identity

Alignment

A0A6J1G3X9 rRNA-processing protein EFG1

3.5e-162

99.4

Show/hide

Query:  MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS
        EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLE  GSEDDGLLDMSEDDFFVSGSS
Subjt:  EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS

Query:  SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR
        SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR
Subjt:  SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR

Query:  GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA
        GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA
Subjt:  GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA

A0A6J1G412 rRNA-processing protein EFG1

2.7e-162

99.4

Show/hide

Query:  MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS
        EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS
Subjt:  EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS

Query:  SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR
        SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNH  QQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR
Subjt:  SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR

Query:  GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA
        GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA
Subjt:  GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA

A0A6J1G415 rRNA-processing protein EFG1

7.5e-165

100

Show/hide

Query:  MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS
        EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS
Subjt:  EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS

Query:  SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR
        SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR
Subjt:  SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR

Query:  GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA
        GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA
Subjt:  GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA

A0A6J1G428 rRNA-processing protein EFG1

1.0e-161

99.1

Show/hide

Query:  MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS
        EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS
Subjt:  EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS

Query:  SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR
        SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNH   QISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR
Subjt:  SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR

Query:  GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA
        GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA
Subjt:  GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA

A0A6J1IBA9 rRNA-processing protein EFG1

1.9e-163

99.4

Show/hide

Query:  MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS
        EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS
Subjt:  EKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSS

Query:  SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR
        SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFK R
Subjt:  SDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR

Query:  GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA
        GSSNS TGHSSNISSNSDAHKPRRKRRPKKKKQQA
Subjt:  GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA

SwissProt top hits

e value

%identity

Alignment

A6ZUS8 rRNA-processing protein EFG1

3.1e-06

32.3

Show/hide

Query:  RRSKALAVEKKPKSV------SLKNQIRSAERMLRKN---LPAEVREVQEKKLEGLR---KQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKL
        +RSKAL    +   +       +K +IR  ER+L+K    LP+ V   +E+ L+ LR   +  E+ +++    K +     ++FFE++K  R+  RL  L
Subjt:  RRSKALAVEKKPKSV------SLKNQIRSAERMLRKN---LPAEVREVQEKKLEGLR---KQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKL

Query:  QRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALF---TGSDDSDTVDRRNKLRKQ
        ++     + D D+  +L   K +L YV  FPKTEKY+AL+   T S D   V+  N  R+Q
Subjt:  QRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALF---TGSDDSDTVDRRNKLRKQ

A8N5J5 rRNA-processing protein EFG1

1.4e-06

32.54

Show/hide

Query:  KALAVEKKPKSVSLKNQIRSAERMLRK-NLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQSQDSDIA
        KA A+  K K   +K+ +R   R+L K NL A+ R   E++L+ L  + +   +   ER + +R  K+KFFER+K+ R++ ++++   +  G S+   + 
Subjt:  KALAVEKKPKSVSLKNQIRSAERMLRK-NLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQSQDSDIA

Query:  DQLSKLKEDLEYVRFFPKTEKYLALF
         QL + + +L Y+  +PKT+KY++LF
Subjt:  DQLSKLKEDLEYVRFFPKTEKYLALF

Q09867 rRNA-processing protein efg1

7.1e-11

36.03

Show/hide

Query:  KKPKSVSLKNQIRSAERMLRK-NLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEK-LQRAPSGQSQDSDIADQLSK
        K P    LK +IR  ER+L+K NLPA +R   E+ L GL++Q  +      ++KIF R +K++FFER+K ERRI++LEK L+       +       + K
Subjt:  KKPKSVSLKNQIRSAERMLRK-NLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEK-LQRAPSGQSQDSDIADQLSK

Query:  LKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKL
         + DL Y++ +P   KY++L+       T + RN++
Subjt:  LKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKL

Q3E705 rRNA-processing protein EFG1

3.1e-06

32.3

Show/hide

Query:  RRSKALAVEKKPKSV------SLKNQIRSAERMLRKN---LPAEVREVQEKKLEGLR---KQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKL
        +RSKAL    +   +       +K +IR  ER+L+K    LP+ V   +E+ L+ LR   +  E+ +++    K +     ++FFE++K  R+  RL  L
Subjt:  RRSKALAVEKKPKSV------SLKNQIRSAERMLRKN---LPAEVREVQEKKLEGLR---KQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKL

Query:  QRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALF---TGSDDSDTVDRRNKLRKQ
        ++     + D D+  +L   K +L YV  FPKTEKY+AL+   T S D   V+  N  R+Q
Subjt:  QRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALF---TGSDDSDTVDRRNKLRKQ

Q5AK42 rRNA-processing protein EFG1

3.6e-07

31.37

Show/hide

Query:  SVSLKNQIRSAERMLRK--NLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRD-RKIKFFERRKIERRIRRLEKLQRAPSGQSQDSDIADQLSKLKE
        S  +K +IR  ER+++K  NLPA+ +   ++ L+GL+ + + +S++  + K+  +    ++FFER+K  R+++ L K     S      DI     +L+ 
Subjt:  SVSLKNQIRSAERMLRK--NLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRD-RKIKFFERRKIERRIRRLEKLQRAPSGQSQDSDIADQLSKLKE

Query:  ---DLEYVRFFPKTEKYLALFTGSDDSD------------TVDRRNKLRKQIK
           DL YV  FPKTEKY++L+   +D D            T +RR + RK I+
Subjt:  ---DLEYVRFFPKTEKYLALFTGSDDSD------------TVDRRNKLRKQIK

Arabidopsis top hits

e value

%identity

Alignment

AT1G04230.1 Protein of unknown function (DUF2361)

2.7e-98

65.5

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Query:  MAHGGYGKRRVNP------AARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIE
        MAHGGY +RRV         +RRSK L VEKKPK+ SLKNQIRS  RM+RK+LP EVRE  EKKL+ L+KQQ+IH RLA ERKIFLR+RK++FFERRKIE
Subjt:  MAHGGYGKRRVNP------AARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIE

Query:  RRIRRLEKLQRAPS-GQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDD
        R IRRLEKL R+ S G  QD++I  QL++LKEDLEYVRFFPK EKY++LF+GSDD    +RR+KLRKQIKAN+I AAASGK+LEETGSEDD LLD+S+DD
Subjt:  RRIRRLEKLQRAPS-GQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDD

Query:  FFVSGSSSDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRS
        FFV+GSSSDEADADDEWTDKS +E  SS SG+A S MSSDERN  ++  S R LMPPP            RS+  S+ R++S+ +R E+ SSSNTS  RS
Subjt:  FFVSGSSSDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRS

Query:  GSSFKARGSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA
         SS  A   ++SHT  SSN+SSNSDAHKP+RKRRPKKKK QA
Subjt:  GSSFKARGSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA

AT5G43720.1 Protein of unknown function (DUF2361)

3.2e-99

65.98

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Query:  MAHGGYGKRRVNP------AARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIE
        MAHGGY KRR +       ++RRSK L VEKKPK+VS+KNQ+RS ER LRK+LP EVRE   +KLE L+KQQ+ H+RLAVERKIF R+RKIKFFERRKIE
Subjt:  MAHGGYGKRRVNP------AARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIE

Query:  RRIRRLEKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDF
        R IRRLEKLQR  S    D DIA+QLSKLKEDLEYVRFFPK EKY++LFTG++DS+ +++R K+R+QIKAN+I AAASGK+LEETGSEDDGLLD+S+DDF
Subjt:  RRIRRLEKLQRAPSGQSQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDF

Query:  FVSGSSSDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSG
        F  GSSSDEADADDE TDKSA+E ASS SG+A SGMSSDERN  ++Q S RALMPPP          QAR +  S    +        SS +NTS+ RS 
Subjt:  FVSGSSSDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSG

Query:  SSFKARGS-SNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQ
        SS+ AR S +NS++  SSN+SSNSDAHKP+RKRRPKKKKQQ
Subjt:  SSFKARGS-SNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQ

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCCCACGGTGGCTACGGCAAGCGCAGGGTGAACCCGGCAGCGCGCCGATCGAAGGCTTTAGCTGTTGAGAAGAAGCCCAAGTCCGTCTCCCTCAAGAACCAGATTCG
ATCCGCTGAGCGCATGCTTCGCAAGAATTTGCCTGCTGAAGTGAGGGAGGTTCAAGAGAAGAAATTGGAAGGACTTAGAAAACAGCAAGAAATTCATTCTCGTTTGGCCG
TTGAGCGCAAAATATTCTTGCGGGATAGGAAGATCAAATTTTTTGAGAGGAGAAAAATTGAAAGAAGAATTAGACGCCTTGAAAAACTGCAACGTGCTCCATCTGGTCAG
TCACAAGATTCGGATATTGCAGATCAATTGTCTAAGTTGAAGGAGGATCTTGAATATGTCAGGTTCTTTCCCAAAACAGAAAAATATTTAGCATTATTTACTGGAAGTGA
TGATTCGGACACGGTTGATAGGAGGAATAAGTTGCGCAAGCAGATAAAAGCCAATCTAATTGCTGCTGCAGCCAGTGGAAAGGATCTAGAAGAGACAGGTAGTGAGGATG
ATGGGTTACTTGACATGAGTGAGGATGATTTCTTCGTATCTGGTAGCTCAAGTGATGAAGCAGATGCAGATGATGAATGGACAGATAAAAGTGCAAGGGAACATGCTTCC
AGTACTTCTGGCAAGGCAGCATCAGGCATGTCTAGCGATGAAAGAAATCATCAGAGGCAGCAGATCTCTGCCAGAGCCTTAATGCCACCTCCCCGTCCAACCAAATCATT
TCCAAGTTCAGCTCAAGCTCGGTCAAAACCAGGGTCTTCATTAAGAAAATTTTCGACAAATCGTAGGGCCGAGGTTTCTTCATCCAGCAATACATCAAGTAGCAGAAGTG
GATCTTCTTTCAAGGCTAGGGGTTCCTCCAACTCTCATACAGGTCACAGCAGTAATATAAGTTCCAATTCTGATGCTCACAAACCCCGAAGAAAGAGAAGGCCTAAAAAG
AAAAAGCAGCAGGCATGA

mRNA sequence

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AAAAATAAGTAACGTTTGTGAGAAAAAAAGGCGCTGATTAGGGCTTTTGCATAAATTAAAATTAAGAAGGTCGTCTAGAAATCCCAAAGAAAAAAAAGGAAAAGAAGAGT
TAGGAAGAGTGAAAGATATCCGTCTCCACTGTCCACCTCTCCGGTGTTATGAATCCACCGGGGTGGCGTTGAGAGCCTTCACAAAACCCTTGCTTTCCTGTATACGATTC
TCTCCCTTCTCTCTCATCTGCGTCTAGGGCAACCATGGCCCACGGTGGCTACGGCAAGCGCAGGGTGAACCCGGCAGCGCGCCGATCGAAGGCTTTAGCTGTTGAGAAGA
AGCCCAAGTCCGTCTCCCTCAAGAACCAGATTCGATCCGCTGAGCGCATGCTTCGCAAGAATTTGCCTGCTGAAGTGAGGGAGGTTCAAGAGAAGAAATTGGAAGGACTT
AGAAAACAGCAAGAAATTCATTCTCGTTTGGCCGTTGAGCGCAAAATATTCTTGCGGGATAGGAAGATCAAATTTTTTGAGAGGAGAAAAATTGAAAGAAGAATTAGACG
CCTTGAAAAACTGCAACGTGCTCCATCTGGTCAGTCACAAGATTCGGATATTGCAGATCAATTGTCTAAGTTGAAGGAGGATCTTGAATATGTCAGGTTCTTTCCCAAAA
CAGAAAAATATTTAGCATTATTTACTGGAAGTGATGATTCGGACACGGTTGATAGGAGGAATAAGTTGCGCAAGCAGATAAAAGCCAATCTAATTGCTGCTGCAGCCAGT
GGAAAGGATCTAGAAGAGACAGGTAGTGAGGATGATGGGTTACTTGACATGAGTGAGGATGATTTCTTCGTATCTGGTAGCTCAAGTGATGAAGCAGATGCAGATGATGA
ATGGACAGATAAAAGTGCAAGGGAACATGCTTCCAGTACTTCTGGCAAGGCAGCATCAGGCATGTCTAGCGATGAAAGAAATCATCAGAGGCAGCAGATCTCTGCCAGAG
CCTTAATGCCACCTCCCCGTCCAACCAAATCATTTCCAAGTTCAGCTCAAGCTCGGTCAAAACCAGGGTCTTCATTAAGAAAATTTTCGACAAATCGTAGGGCCGAGGTT
TCTTCATCCAGCAATACATCAAGTAGCAGAAGTGGATCTTCTTTCAAGGCTAGGGGTTCCTCCAACTCTCATACAGGTCACAGCAGTAATATAAGTTCCAATTCTGATGC
TCACAAACCCCGAAGAAAGAGAAGGCCTAAAAAGAAAAAGCAGCAGGCATGATAGATAGGCGTCGGCTCCCTATAACCTGACTTCTGAAGCGGTTTGTGAAATTTTAACC
CAACCATGGATGTATCTAAGTCTGCTCTCGACCAGTTTGGAGGTTTGCTTGCTTGCACTATATATATATATATATACTAGGAGGAGTTGGGAAAATCATTTCCTTTAGTT
CTGAAATGATATGTGATCTTTTATTATGGTTCTTTTTGTGTTGTTTCTTTGTTTTCTATACGGTTGCAACTTGTAGTGGGACCTGAATCTTATGTAGTTCCGTGCTGCTT
CTTGTGTGGCCTCTTGAAACTAGTCCACTTAAATTACTTGTTCTTTGGGAATGAATATAGTTACATTGCTCATTCCCCTATGATCCATTCCCAACAATTGAGTTATGTTA
TCAAAATCAATTCATTCACTACGCTGTTTTCTTCTCTCGAGTTAGCCCACTTTTACTCTCTATCATAGTGTACTGTTAATTGATTTTAACTTCATTTTTATCATGTAACT
TCTCCGAAGTTGGTGTATATGTCATTCTTATGCTTGTCTATGATAAGTTGTCTGTGGCTATATG

Protein sequence

Show/hide protein sequence

MAHGGYGKRRVNPAARRSKALAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREVQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQ
SQDSDIADQLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSSSDEADADDEWTDKSAREHAS
STSGKAASGMSSDERNHQRQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKARGSSNSHTGHSSNISSNSDAHKPRRKRRPKK
KKQQA

Carg06189 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome