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Carg06193 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06193
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionE3 ubiquitin protein ligase DRIP2-like
Genome locationCarg_Chr06:8572666..8573410
RNA-Seq ExpressionCarg06193
SyntenyCarg06193
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582350.1 E3 ubiquitin protein ligase DRIP2, partial [Cucurbita argyrosperma subsp. sororia]2.7e-1343.8Show/hide
Query:  LTLKPAEQTMDDLWEKSTASPSHPVTQMVSKSTAQDNLVPQQCLSTVIAHRKLVWVQNNRN---------------------KFNDCNIQVNVAKAEAIQ
        L  K  E+++  L   +T   SH   + + K+TAQ+NLV QQCLS +I  RKL++VQN RN                       NDCNIQ  V K E IQ
Subjt:  LTLKPAEQTMDDLWEKSTASPSHPVTQMVSKSTAQDNLVPQQCLSTVIAHRKLVWVQNNRN---------------------KFNDCNIQVNVAKAEAIQ

Query:  IEDINCNVQEHGYKPMMERVE
        I+D  C VQEH +KP+MERVE
Subjt:  IEDINCNVQEHGYKPMMERVE

KAG6597394.1 hypothetical protein SDJN03_10574, partial [Cucurbita argyrosperma subsp. sororia]5.3e-3896.51Show/hide
Query:  KSTASPSHPVTQMVSKSTAQDNLVPQQCLSTVIAHRKLVWVQNNRNKFNDCNIQVNVAKAEAIQIEDINCNVQEHGYKPMMERVES
        +STASPSHPVTQMVSKSTAQDNLVPQQCLSTVIAHRKLVW QNNRNKFNDCNIQVNVAKAEAIQIEDIN NVQEHGYKPMMERVES
Subjt:  KSTASPSHPVTQMVSKSTAQDNLVPQQCLSTVIAHRKLVWVQNNRNKFNDCNIQVNVAKAEAIQIEDINCNVQEHGYKPMMERVES

KAG7018762.1 E3 ubiquitin protein ligase DRIP2 [Cucurbita argyrosperma subsp. argyrosperma]2.7e-1343.8Show/hide
Query:  LTLKPAEQTMDDLWEKSTASPSHPVTQMVSKSTAQDNLVPQQCLSTVIAHRKLVWVQNNRN---------------------KFNDCNIQVNVAKAEAIQ
        L  K  E+++  L   +T   SH   + + K+TAQ+NLV QQCLS +I  RKL++VQN RN                       NDCNIQ  V K E IQ
Subjt:  LTLKPAEQTMDDLWEKSTASPSHPVTQMVSKSTAQDNLVPQQCLSTVIAHRKLVWVQNNRN---------------------KFNDCNIQVNVAKAEAIQ

Query:  IEDINCNVQEHGYKPMMERVE
        I+D  C VQEH +KP+MERVE
Subjt:  IEDINCNVQEHGYKPMMERVE

KAG7028854.1 hypothetical protein SDJN02_10036, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-87100Show/hide
Query:  MWDLTVHSSSRPSILARTRSPLQLMRDPPPLSKINLLADTQPSVHPFEAQPLCWHIVWYLTLKPAEQTMDDLWEKSTASPSHPVTQMVSKSTAQDNLVPQ
        MWDLTVHSSSRPSILARTRSPLQLMRDPPPLSKINLLADTQPSVHPFEAQPLCWHIVWYLTLKPAEQTMDDLWEKSTASPSHPVTQMVSKSTAQDNLVPQ
Subjt:  MWDLTVHSSSRPSILARTRSPLQLMRDPPPLSKINLLADTQPSVHPFEAQPLCWHIVWYLTLKPAEQTMDDLWEKSTASPSHPVTQMVSKSTAQDNLVPQ

Query:  QCLSTVIAHRKLVWVQNNRNKFNDCNIQVNVAKAEAIQIEDINCNVQEHGYKPMMERVES
        QCLSTVIAHRKLVWVQNNRNKFNDCNIQVNVAKAEAIQIEDINCNVQEHGYKPMMERVES
Subjt:  QCLSTVIAHRKLVWVQNNRNKFNDCNIQVNVAKAEAIQIEDINCNVQEHGYKPMMERVES

XP_038877089.1 E3 ubiquitin protein ligase DRIP2-like [Benincasa hispida]4.1e-1445.31Show/hide
Query:  PAEQTMDDLWEKSTASPSHPV--------TQMVS--KSTAQDNLVPQQCLSTVIAHRKLVWVQNNRNK---------------------FNDCNIQVNVA
        P ++  +   EKS +S S P         + M S  KSTAQ+NL  QQC+S++IAHRKL++ QN  N                       NDCN Q  VA
Subjt:  PAEQTMDDLWEKSTASPSHPV--------TQMVS--KSTAQDNLVPQQCLSTVIAHRKLVWVQNNRNK---------------------FNDCNIQVNVA

Query:  KAEAIQIEDINCNVQEHGYKPMMERVES
        KAE IQI+D  CNVQEHG KPMMERV+S
Subjt:  KAEAIQIEDINCNVQEHGYKPMMERVES

TrEMBL top hitse value%identityAlignment
A0A1S4DSU5 E3 ubiquitin protein ligase DRIP2-like isoform X21.6e-1143.4Show/hide
Query:  EKSTASPSHPVTQMVSKSTAQDNLVPQQCLSTVIAHRKLVWVQNNRNK--------------------FNDCNIQVNVAKAEAIQIEDINCNVQEHGYKP
        E S  +     T+M+S ST+Q++   QQCLST+I H+KL +  N +N                      NDC IQ  +AKAE IQI+D  CN+QEHG KP
Subjt:  EKSTASPSHPVTQMVSKSTAQDNLVPQQCLSTVIAHRKLVWVQNNRNK--------------------FNDCNIQVNVAKAEAIQIEDINCNVQEHGYKP

Query:  MMERVE
        +MERVE
Subjt:  MMERVE

A0A5A7U6S5 E3 ubiquitin protein ligase DRIP2-like1.6e-1143.4Show/hide
Query:  EKSTASPSHPVTQMVSKSTAQDNLVPQQCLSTVIAHRKLVWVQNNRNK--------------------FNDCNIQVNVAKAEAIQIEDINCNVQEHGYKP
        E S  +     T+M+S ST+Q++   QQCLST+I H+KL +  N +N                      NDC IQ  +AKAE IQI+D  CN+QEHG KP
Subjt:  EKSTASPSHPVTQMVSKSTAQDNLVPQQCLSTVIAHRKLVWVQNNRNK--------------------FNDCNIQVNVAKAEAIQIEDINCNVQEHGYKP

Query:  MMERVE
        +MERVE
Subjt:  MMERVE

A0A5D3CZD3 E3 ubiquitin protein ligase DRIP2-like1.6e-1143.4Show/hide
Query:  EKSTASPSHPVTQMVSKSTAQDNLVPQQCLSTVIAHRKLVWVQNNRNK--------------------FNDCNIQVNVAKAEAIQIEDINCNVQEHGYKP
        E S  +     T+M+S ST+Q++   QQCLST+I H+KL +  N +N                      NDC IQ  +AKAE IQI+D  CN+QEHG KP
Subjt:  EKSTASPSHPVTQMVSKSTAQDNLVPQQCLSTVIAHRKLVWVQNNRNK--------------------FNDCNIQVNVAKAEAIQIEDINCNVQEHGYKP

Query:  MMERVE
        +MERVE
Subjt:  MMERVE

A0A6J1EA43 E3 ubiquitin protein ligase DRIP2-like4.9e-1342.98Show/hide
Query:  LTLKPAEQTMDDLWEKSTASPSHPVTQMVSKSTAQDNLVPQQCLSTVIAHRKLVWVQNNRN---------------------KFNDCNIQVNVAKAEAIQ
        L  K  E+++  L   +T   SH   + + K+TAQ+NLV QQC+S +I  RKLV+VQN +N                       NDCNIQ  V K E IQ
Subjt:  LTLKPAEQTMDDLWEKSTASPSHPVTQMVSKSTAQDNLVPQQCLSTVIAHRKLVWVQNNRN---------------------KFNDCNIQVNVAKAEAIQ

Query:  IEDINCNVQEHGYKPMMERVE
        I+D  C VQEH +KP+MERVE
Subjt:  IEDINCNVQEHGYKPMMERVE

A0A6J1IYE8 E3 ubiquitin protein ligase DRIP2-like6.4e-1342.15Show/hide
Query:  LTLKPAEQTMDDLWEKSTASPSHPVTQMVSKSTAQDNLVPQQCLSTVIAHRKLVWVQNNRN---------------------KFNDCNIQVNVAKAEAIQ
        L  K  E+++  L   +T + SH   + + K+TAQ+NLV QQCLS +I  RKL++ QN +N                       NDCNIQ  V K E IQ
Subjt:  LTLKPAEQTMDDLWEKSTASPSHPVTQMVSKSTAQDNLVPQQCLSTVIAHRKLVWVQNNRN---------------------KFNDCNIQVNVAKAEAIQ

Query:  IEDINCNVQEHGYKPMMERVE
        I+D  C VQEH +KP+MERVE
Subjt:  IEDINCNVQEHGYKPMMERVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGATCTCACAGTTCACTCCTCTTCGAGGCCCAGTATCCTTGCTCGAACTCGTTCCCCTCTCCAATTGATGCGGGACCCTCCACCCCTTTCAAAGATCAACCTTCT
CGCTGACACACAGCCTAGTGTCCACCCCTTTGAGGCTCAGCCTCTTTGTTGGCACATCGTTTGGTATCTAACCCTGAAACCAGCAGAGCAGACAATGGATGATCTATGGG
AAAAGAGTACAGCTTCACCTTCTCATCCTGTAACGCAAATGGTGTCGAAATCGACAGCACAAGACAACCTCGTCCCACAACAATGTCTTTCCACCGTGATTGCTCACAGA
AAACTCGTCTGGGTTCAAAATAACCGGAACAAGTTTAATGACTGTAATATACAAGTGAATGTTGCCAAGGCAGAGGCAATCCAGATTGAAGATATCAATTGTAATGTTCA
AGAACATGGTTACAAGCCAATGATGGAAAGAGTTGAAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGATCTCACAGTTCACTCCTCTTCGAGGCCCAGTATCCTTGCTCGAACTCGTTCCCCTCTCCAATTGATGCGGGACCCTCCACCCCTTTCAAAGATCAACCTTCT
CGCTGACACACAGCCTAGTGTCCACCCCTTTGAGGCTCAGCCTCTTTGTTGGCACATCGTTTGGTATCTAACCCTGAAACCAGCAGAGCAGACAATGGATGATCTATGGG
AAAAGAGTACAGCTTCACCTTCTCATCCTGTAACGCAAATGGTGTCGAAATCGACAGCACAAGACAACCTCGTCCCACAACAATGTCTTTCCACCGTGATTGCTCACAGA
AAACTCGTCTGGGTTCAAAATAACCGGAACAAGTTTAATGACTGTAATATACAAGTGAATGTTGCCAAGGCAGAGGCAATCCAGATTGAAGATATCAATTGTAATGTTCA
AGAACATGGTTACAAGCCAATGATGGAAAGAGTTGAAAGTTGA
Protein sequenceShow/hide protein sequence
MWDLTVHSSSRPSILARTRSPLQLMRDPPPLSKINLLADTQPSVHPFEAQPLCWHIVWYLTLKPAEQTMDDLWEKSTASPSHPVTQMVSKSTAQDNLVPQQCLSTVIAHR
KLVWVQNNRNKFNDCNIQVNVAKAEAIQIEDINCNVQEHGYKPMMERVES