; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg06194 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06194
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDNA-directed RNA polymerase V subunit 7-like
Genome locationCarg_Chr06:8569540..8571296
RNA-Seq ExpressionCarg06194
SyntenyCarg06194
Gene Ontology termsGO:0000730 - DNA recombinase assembly (biological process)
GO:0070192 - chromosome organization involved in meiotic cell cycle (biological process)
GO:0042148 - strand invasion (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0007131 - reciprocal meiotic recombination (biological process)
GO:0006352 - DNA-templated transcription, initiation (biological process)
GO:0006312 - mitotic recombination (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0000794 - condensed nuclear chromosome (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0008094 - DNA-dependent ATPase activity (molecular function)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0000150 - recombinase activity (molecular function)
InterPro domainsIPR004895 - Prenylated rab acceptor PRA1
IPR036898 - RNA polymerase Rpb7-like, N-terminal domain superfamily
IPR045113 - RNA polymerase Rpb7-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018763.1 DNA-directed RNA polymerase subunit 7-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-15573.7Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKN--KSQYVTFPITFGCRTFVPSGGEILLGVVRHVFR
        MFCEVELVRDV+V  EK  RDG+N QRYI+  LLENLLKE+ASKDHGYF+AVTSLKSIGKG+ KN  +SQ V+FPITF CRTF+P  GEIL GVVRH+FR
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKN--KSQYVTFPITFGCRTFVPSGGEILLGVVRHVFR

Query:  RGLLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADDL-----GSSTL
        RGLLLKCGPI YVFLS+RKMPTYHYVGG+NPVFSS + ATI  +  VRF+VLGVRW+EKRGCIKKEFVMLASLEG+ +LGPIS S++D+      GS  +
Subjt:  RGLLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADDL-----GSSTL

Query:  DSHYQ--------PCSG---QNFQAFIPMSTAEFAVTFKEAGRSVIATRRPWREFLDPLSLSLPSSLSDATSRISQNLTRFLSNYCLVVLLLIFLGLIYH
           +         P  G   ++FQ  +PMS AEFAVTFKEAGRSVIATR PWREFLDP  LSLPSSLS+AT+R+SQNLTRFLSNYCL++LLL+ LGLIYH
Subjt:  DSHYQ--------PCSG---QNFQAFIPMSTAEFAVTFKEAGRSVIATRRPWREFLDPLSLSLPSSLSDATSRISQNLTRFLSNYCLVVLLLIFLGLIYH

Query:  PFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGDFVLVIILGLATGLALALTGVFVNVLISLAIGAMVVCLHAALKGTEDALGDLQDPFGDTLLESPRGD
        PFSMIV FLVF AWF LYFSR+DP+RVFGF+L D VLVIILGL TGLALA  GVFVNVLISL IGA+VVCLHAAL+ TED LGDLQDPFGD LL+SPRGD
Subjt:  PFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGDFVLVIILGLATGLALALTGVFVNVLISLAIGAMVVCLHAALKGTEDALGDLQDPFGDTLLESPRGD

Query:  YSG
        YSG
Subjt:  YSG

KAG7028853.1 DNA-directed RNA polymerase V subunit 7, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-214100Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
        MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG

Query:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADDLGSSTLDSHYQPC
        LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADDLGSSTLDSHYQPC
Subjt:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADDLGSSTLDSHYQPC

Query:  SGQNFQAFIPMSTAEFAVTFKEAGRSVIATRRPWREFLDPLSLSLPSSLSDATSRISQNLTRFLSNYCLVVLLLIFLGLIYHPFSMIVFFLVFVAWFVLY
        SGQNFQAFIPMSTAEFAVTFKEAGRSVIATRRPWREFLDPLSLSLPSSLSDATSRISQNLTRFLSNYCLVVLLLIFLGLIYHPFSMIVFFLVFVAWFVLY
Subjt:  SGQNFQAFIPMSTAEFAVTFKEAGRSVIATRRPWREFLDPLSLSLPSSLSDATSRISQNLTRFLSNYCLVVLLLIFLGLIYHPFSMIVFFLVFVAWFVLY

Query:  FSRDDPIRVFGFELGDFVLVIILGLATGLALALTGVFVNVLISLAIGAMVVCLHAALKGTEDALGDLQDPFGDTLLESPRGDYSGI
        FSRDDPIRVFGFELGDFVLVIILGLATGLALALTGVFVNVLISLAIGAMVVCLHAALKGTEDALGDLQDPFGDTLLESPRGDYSGI
Subjt:  FSRDDPIRVFGFELGDFVLVIILGLATGLALALTGVFVNVLISLAIGAMVVCLHAALKGTEDALGDLQDPFGDTLLESPRGDYSGI

XP_022935102.1 DNA-directed RNA polymerase V subunit 7-like isoform X2 [Cucurbita moschata]8.7e-10398.44Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
        MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG

Query:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADDLGSST
        LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEAD+LG  T
Subjt:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADDLGSST

XP_023538723.1 DNA-directed RNA polymerase V subunit 7-like isoform X1 [Cucurbita pepo subsp. pepo]8.7e-10398.44Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
        MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG

Query:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADDLGSST
        LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEAD+LG  T
Subjt:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADDLGSST

XP_023538725.1 DNA-directed RNA polymerase V subunit 7-like isoform X2 [Cucurbita pepo subsp. pepo]8.7e-10398.44Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
        MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG

Query:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADDLGSST
        LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEAD+LG  T
Subjt:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADDLGSST

TrEMBL top hitse value%identityAlignment
A0A6J1F4K5 PRA1 family protein3.0e-8599.43Show/hide
Query:  MSTAEFAVTFKEAGRSVIATRRPWREFLDPLSLSLPSSLSDATSRISQNLTRFLSNYCLVVLLLIFLGLIYHPFSMIVFFLVFVAWFVLYFSRDDPIRVF
        MSTAEFAVTFKEAGRSVIATRRPWREFLDPLSLSLPSSLSDATSRISQNLTRFLSNYCLVVLLLIFLGLIYHPFSMIVFFLVFVAWFVLYFSRDDPIRVF
Subjt:  MSTAEFAVTFKEAGRSVIATRRPWREFLDPLSLSLPSSLSDATSRISQNLTRFLSNYCLVVLLLIFLGLIYHPFSMIVFFLVFVAWFVLYFSRDDPIRVF

Query:  GFELGDFVLVIILGLATGLALALTGVFVNVLISLAIGAMVVCLHAALKGTEDALGDLQDPFGDTLLESPRGDYSGI
        GFELGDFVLVIILGLATGLALALTGVFVNVLISLAIGAMVVCLHAALKGTEDAL DLQDPFGDTLLESPRGDYSGI
Subjt:  GFELGDFVLVIILGLATGLALALTGVFVNVLISLAIGAMVVCLHAALKGTEDALGDLQDPFGDTLLESPRGDYSGI

A0A6J1F4M9 DNA-directed RNA polymerase V subunit 7-like isoform X24.2e-10398.44Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
        MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG

Query:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADDLGSST
        LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEAD+LG  T
Subjt:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADDLGSST

A0A6J1F9M0 DNA-directed RNA polymerase V subunit 7-like isoform X14.2e-10398.44Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
        MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG

Query:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADDLGSST
        LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEAD+LG  T
Subjt:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADDLGSST

A0A6J1IA58 DNA-directed RNA polymerase V subunit 7-like isoform X14.2e-10398.44Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
        MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG

Query:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADDLGSST
        LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEAD+LG  T
Subjt:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADDLGSST

A0A6J1IDV3 DNA-directed RNA polymerase V subunit 7-like isoform X24.2e-10398.44Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
        MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG

Query:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADDLGSST
        LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEAD+LG  T
Subjt:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADDLGSST

SwissProt top hitse value%identityAlignment
A6QRA1 DNA-directed RNA polymerase V subunit 71.6e-3541.99Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
        MF +V+L  +V + AE  D  GL  +R I+  LLE    ++A+K+ GY++AVT+L  IG+G+ +  +  V FP+ F   TF    GEI+ GVV  V + G
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG

Query:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPIS
        + ++CGPI  V+LS  KMP Y Y+ G+NP+F + + + I+ E+ VR  V+G++W+E    +++EF  LASLEG + LGP+S
Subjt:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPIS

P93829 PRA1 family protein D6.0e-3043.68Show/hide
Query:  KEAGRSVIATRRPWREFLDPLSLSLPSSLSDATSRISQNLTRFLSNYCLVVLLLIFLGLIYHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGD-FVL
        KE  +S+    RPW +FLD  + S PSS++DAT+R++QNLT F  NY +++ +L+ L LI  P +++ F  V +AWF LYF+R++P+ +FGF + D  V 
Subjt:  KEAGRSVIATRRPWREFLDPLSLSLPSSLSDATSRISQNLTRFLSNYCLVVLLLIFLGLIYHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGD-FVL

Query:  VIILGLATGLALALTGVFVNVLISLAIGAMVVCLHAALKGTEDALG-DLQDPFGDTLLES------PRGDYSGI
        V+++GL+ G +L  TGV++  L ++  G +V+ LHAAL+GT+D +  DL+ P+G  L  S       RGDYSGI
Subjt:  VIILGLATGLALALTGVFVNVLISLAIGAMVVCLHAALKGTEDALG-DLQDPFGDTLLES------PRGDYSGI

Q6NML5 DNA-directed RNA polymerase subunit 7-like protein6.2e-3538.19Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKN-------KSQYVTFPITFGCRTFVPSGGEILLGVV
        MF EVE+ RDV + A+    +G +  + I+ RLL++L+ E+A ++HG+++ +T+LKSIG  +  N       +++ +TFP++F CRTF+P+ G+IL G V
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKN-------KSQYVTFPITFGCRTFVPSGGEILLGVV

Query:  RHVFRRGLLLKCGPINYVFLSSRKMPTYHYVGG-----KNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADD
        + V   G  ++ GP+ Y +LS  KMP YHYV       + P F  ++ + I     VRF VL VR+ E+    + ++ +LA+LEG+ + GPISL+ +D+
Subjt:  RHVFRRGLLLKCGPINYVFLSSRKMPTYHYVGG-----KNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADD

Q8LE42 DNA-directed RNA polymerase IV subunit 72.7e-3042.46Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
        MF +V+L  DV + AE  D  GL  QR I+ RLLE   KE+A+KD GY I  T L++IG+G+ K ++  + FP+ F    F    GEI+ GVV  V + G
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG

Query:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGP
        + LK GP   ++LS  KMP Y ++ G+NP F +   + I+  + VRF VL   W E     +K+F+ LAS++G N LGP
Subjt:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGP

Q9FRR1 PRA1 family protein E1.4e-2647.3Show/hide
Query:  KEAGRSVIATRRPWREFLDPLSLSLPSSLSDATSRISQNLTRFLSNYCLVVLLLIFLGLIYHPFSMIVFFLVFVAWFVLYFSRD--DPIRVFGFELGDFV
        K+  +S+I T RPWRE LD  +LSLP    +A + +  N++ F  NY L VL ++FLGLIYHP SMI F +VF+ W +LYFSRD  D I + G E+ D +
Subjt:  KEAGRSVIATRRPWREFLDPLSLSLPSSLSDATSRISQNLTRFLSNYCLVVLLLIFLGLIYHPFSMIVFFLVFVAWFVLYFSRD--DPIRVFGFELGDFV

Query:  LVIILGLATGLALALTGVFVNVLISLAIGAMVVCLHAALKGTEDALGD
        ++++L L T LAL  T V  NVL+SL IG ++V  H A + T+D   D
Subjt:  LVIILGLATGLALALTGVFVNVLISLAIGAMVVCLHAALKGTEDALGD

Arabidopsis top hitse value%identityAlignment
AT1G04260.1 CAMV movement protein interacting protein 74.3e-3143.68Show/hide
Query:  KEAGRSVIATRRPWREFLDPLSLSLPSSLSDATSRISQNLTRFLSNYCLVVLLLIFLGLIYHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGD-FVL
        KE  +S+    RPW +FLD  + S PSS++DAT+R++QNLT F  NY +++ +L+ L LI  P +++ F  V +AWF LYF+R++P+ +FGF + D  V 
Subjt:  KEAGRSVIATRRPWREFLDPLSLSLPSSLSDATSRISQNLTRFLSNYCLVVLLLIFLGLIYHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGD-FVL

Query:  VIILGLATGLALALTGVFVNVLISLAIGAMVVCLHAALKGTEDALG-DLQDPFGDTLLES------PRGDYSGI
        V+++GL+ G +L  TGV++  L ++  G +V+ LHAAL+GT+D +  DL+ P+G  L  S       RGDYSGI
Subjt:  VIILGLATGLALALTGVFVNVLISLAIGAMVVCLHAALKGTEDALG-DLQDPFGDTLLES------PRGDYSGI

AT4G14520.1 DNA-directed RNA polymerase II-related4.4e-3638.19Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKN-------KSQYVTFPITFGCRTFVPSGGEILLGVV
        MF EVE+ RDV + A+    +G +  + I+ RLL++L+ E+A ++HG+++ +T+LKSIG  +  N       +++ +TFP++F CRTF+P+ G+IL G V
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKN-------KSQYVTFPITFGCRTFVPSGGEILLGVV

Query:  RHVFRRGLLLKCGPINYVFLSSRKMPTYHYVGG-----KNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADD
        + V   G  ++ GP+ Y +LS  KMP YHYV       + P F  ++ + I     VRF VL VR+ E+    + ++ +LA+LEG+ + GPISL+ +D+
Subjt:  RHVFRRGLLLKCGPINYVFLSSRKMPTYHYVGG-----KNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADD

AT4G14520.2 DNA-directed RNA polymerase II-related4.4e-3638.19Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKN-------KSQYVTFPITFGCRTFVPSGGEILLGVV
        MF EVE+ RDV + A+    +G +  + I+ RLL++L+ E+A ++HG+++ +T+LKSIG  +  N       +++ +TFP++F CRTF+P+ G+IL G V
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKN-------KSQYVTFPITFGCRTFVPSGGEILLGVV

Query:  RHVFRRGLLLKCGPINYVFLSSRKMPTYHYVGG-----KNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADD
        + V   G  ++ GP+ Y +LS  KMP YHYV       + P F  ++ + I     VRF VL VR+ E+    + ++ +LA+LEG+ + GPISL+ +D+
Subjt:  RHVFRRGLLLKCGPINYVFLSSRKMPTYHYVGG-----KNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADD

AT4G14520.3 DNA-directed RNA polymerase II-related4.4e-3638.19Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKN-------KSQYVTFPITFGCRTFVPSGGEILLGVV
        MF EVE+ RDV + A+    +G +  + I+ RLL++L+ E+A ++HG+++ +T+LKSIG  +  N       +++ +TFP++F CRTF+P+ G+IL G V
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKN-------KSQYVTFPITFGCRTFVPSGGEILLGVV

Query:  RHVFRRGLLLKCGPINYVFLSSRKMPTYHYVGG-----KNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADD
        + V   G  ++ GP+ Y +LS  KMP YHYV       + P F  ++ + I     VRF VL VR+ E+    + ++ +LA+LEG+ + GPISL+ +D+
Subjt:  RHVFRRGLLLKCGPINYVFLSSRKMPTYHYVGG-----KNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADD

AT4G14660.1 RNA polymerase Rpb7-like, N-terminal domain1.2e-3641.99Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
        MF +V+L  +V + AE  D  GL  +R I+  LLE    ++A+K+ GY++AVT+L  IG+G+ +  +  V FP+ F   TF    GEI+ GVV  V + G
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG

Query:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPIS
        + ++CGPI  V+LS  KMP Y Y+ G+NP+F + + + I+ E+ VR  V+G++W+E    +++EF  LASLEG + LGP+S
Subjt:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTGTGAAGTGGAACTAGTGAGAGATGTGAAAGTGGTGGCTGAAAAGGCAGATAGAGATGGTCTCAACTTCCAGAGGTACATTATGGCACGTCTATTAGAGAACTT
ATTGAAGGAGAGGGCCAGCAAAGACCATGGCTATTTTATTGCTGTTACTAGCTTGAAGAGCATAGGCAAGGGACAGTGCAAGAATAAATCTCAGTATGTTACATTCCCCA
TTACCTTTGGCTGCCGAACCTTTGTGCCTTCAGGGGGAGAAATCTTGCTTGGAGTTGTTCGTCACGTATTTCGTCGCGGATTGCTCCTAAAATGTGGACCGATCAACTAC
GTGTTTCTTTCATCTCGTAAAATGCCAACCTACCATTATGTTGGTGGTAAGAATCCTGTGTTCTCAAGCAACGAATTCGCCACGATTCGAACCGAGAGCGCTGTACGGTT
CAATGTGCTTGGTGTGAGATGGATAGAGAAAAGAGGATGCATCAAAAAGGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAGCAACACACTTGGACCCATTTCATTGTCGG
AAGCCGATGACTTGGGATCTTCCACTCTCGACAGTCATTACCAGCCTTGCTCCGGCCAAAATTTCCAGGCTTTTATCCCAATGTCGACCGCTGAATTCGCCGTCACTTTC
AAGGAAGCCGGTCGATCCGTCATCGCCACCCGCCGTCCATGGCGGGAATTCCTCGACCCATTGTCTCTCAGCCTTCCTTCTTCCCTCTCCGACGCGACCTCTCGGATTTC
TCAGAACTTGACCCGTTTCCTTTCCAATTACTGTCTTGTCGTCTTGCTTCTCATATTTCTTGGCCTCATCTACCATCCCTTTTCCATGATTGTGTTCTTCCTTGTGTTTG
TTGCCTGGTTCGTCCTTTACTTCTCCCGCGACGACCCAATTAGGGTTTTTGGTTTTGAGTTGGGAGATTTTGTTTTGGTCATCATTCTTGGGTTGGCTACCGGATTGGCG
CTGGCTTTGACAGGGGTTTTCGTGAATGTGCTGATTTCGCTTGCCATTGGGGCCATGGTGGTTTGTTTGCATGCGGCTTTGAAGGGCACGGAGGATGCTCTTGGGGATTT
GCAAGACCCTTTTGGGGATACGCTGTTGGAGAGCCCGAGAGGTGATTACAGCGGCATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTGTGAAGTGGAACTAGTGAGAGATGTGAAAGTGGTGGCTGAAAAGGCAGATAGAGATGGTCTCAACTTCCAGAGGTACATTATGGCACGTCTATTAGAGAACTT
ATTGAAGGAGAGGGCCAGCAAAGACCATGGCTATTTTATTGCTGTTACTAGCTTGAAGAGCATAGGCAAGGGACAGTGCAAGAATAAATCTCAGTATGTTACATTCCCCA
TTACCTTTGGCTGCCGAACCTTTGTGCCTTCAGGGGGAGAAATCTTGCTTGGAGTTGTTCGTCACGTATTTCGTCGCGGATTGCTCCTAAAATGTGGACCGATCAACTAC
GTGTTTCTTTCATCTCGTAAAATGCCAACCTACCATTATGTTGGTGGTAAGAATCCTGTGTTCTCAAGCAACGAATTCGCCACGATTCGAACCGAGAGCGCTGTACGGTT
CAATGTGCTTGGTGTGAGATGGATAGAGAAAAGAGGATGCATCAAAAAGGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAGCAACACACTTGGACCCATTTCATTGTCGG
AAGCCGATGACTTGGGATCTTCCACTCTCGACAGTCATTACCAGCCTTGCTCCGGCCAAAATTTCCAGGCTTTTATCCCAATGTCGACCGCTGAATTCGCCGTCACTTTC
AAGGAAGCCGGTCGATCCGTCATCGCCACCCGCCGTCCATGGCGGGAATTCCTCGACCCATTGTCTCTCAGCCTTCCTTCTTCCCTCTCCGACGCGACCTCTCGGATTTC
TCAGAACTTGACCCGTTTCCTTTCCAATTACTGTCTTGTCGTCTTGCTTCTCATATTTCTTGGCCTCATCTACCATCCCTTTTCCATGATTGTGTTCTTCCTTGTGTTTG
TTGCCTGGTTCGTCCTTTACTTCTCCCGCGACGACCCAATTAGGGTTTTTGGTTTTGAGTTGGGAGATTTTGTTTTGGTCATCATTCTTGGGTTGGCTACCGGATTGGCG
CTGGCTTTGACAGGGGTTTTCGTGAATGTGCTGATTTCGCTTGCCATTGGGGCCATGGTGGTTTGTTTGCATGCGGCTTTGAAGGGCACGGAGGATGCTCTTGGGGATTT
GCAAGACCCTTTTGGGGATACGCTGTTGGAGAGCCCGAGAGGTGATTACAGCGGCATCTGA
Protein sequenceShow/hide protein sequence
MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINY
VFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADDLGSSTLDSHYQPCSGQNFQAFIPMSTAEFAVTF
KEAGRSVIATRRPWREFLDPLSLSLPSSLSDATSRISQNLTRFLSNYCLVVLLLIFLGLIYHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGDFVLVIILGLATGLA
LALTGVFVNVLISLAIGAMVVCLHAALKGTEDALGDLQDPFGDTLLESPRGDYSGI