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Carg06202 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06202
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr06:8545692..8545991
RNA-Seq ExpressionCarg06202
SyntenyCarg06202
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049291.1 putative transmembrane protein [Cucumis melo var. makuwa]4.8e-2973.96Show/hide
Query:  ILILLQLLPNAAGRTLPEKPAMVRRRELEMELKLKLQSLQRVRVPPSGPSGCTFIPGTNGPGCPLEVRHYAGNGSKQRPSTLRRYATPVRVVEALI
        IL+LLQL PN AGRTL EKP MVRR    MEL LKLQSLQRV VPPSGPSGCTFIPGTNGPGCPL+ RHY    S +RPST RR+A P RVV+AL+
Subjt:  ILILLQLLPNAAGRTLPEKPAMVRRRELEMELKLKLQSLQRVRVPPSGPSGCTFIPGTNGPGCPLEVRHYAGNGSKQRPSTLRRYATPVRVVEALI

KAG6597386.1 hypothetical protein SDJN03_10566, partial [Cucurbita argyrosperma subsp. sororia]6.6e-47100Show/hide
Query:  MAFILILLQLLPNAAGRTLPEKPAMVRRRELEMELKLKLQSLQRVRVPPSGPSGCTFIPGTNGPGCPLEVRHYAGNGSKQRPSTLRRYATPVRVVEALI
        MAFILILLQLLPNAAGRTLPEKPAMVRRRELEMELKLKLQSLQRVRVPPSGPSGCTFIPGTNGPGCPLEVRHYAGNGSKQRPSTLRRYATPVRVVEALI
Subjt:  MAFILILLQLLPNAAGRTLPEKPAMVRRRELEMELKLKLQSLQRVRVPPSGPSGCTFIPGTNGPGCPLEVRHYAGNGSKQRPSTLRRYATPVRVVEALI

KAG7018772.1 hypothetical protein SDJN02_20645, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-2177.03Show/hide
Query:  LLPNAAGRTLPEKPAMVRRRELEMELKLKLQSLQRVRVPPSGPSGCTFIPGTNGPGCPLEVRHYAGNGSKQRPS
        L PN AGRTL E P+MVRR EL  +LKLKLQSLQRV VPPSGPSGCTFIPGTNGPGCP +VRHY  N S +RPS
Subjt:  LLPNAAGRTLPEKPAMVRRRELEMELKLKLQSLQRVRVPPSGPSGCTFIPGTNGPGCPLEVRHYAGNGSKQRPS

KGN56901.1 hypothetical protein Csa_009866 [Cucumis sativus]8.7e-3174.75Show/hide
Query:  MAFILILLQLLPNAAGRTLPEKPAMVRRRELEMELKLKLQSLQRVRVPPSGPSGCTFIPGTNGPGCPLEVRHYAGNGSKQRPSTLRRYATPVRVVEALI
        MA +L+LLQL PN AGRTL EKP MVRR    MEL LKLQSLQRV VPPSGPSGCTFIPGTNGPGCPL+ RHY  N S QRPST RRYA P RVV+ L+
Subjt:  MAFILILLQLLPNAAGRTLPEKPAMVRRRELEMELKLKLQSLQRVRVPPSGPSGCTFIPGTNGPGCPLEVRHYAGNGSKQRPSTLRRYATPVRVVEALI

TYK17267.1 putative transmembrane protein [Cucumis melo var. makuwa]4.8e-2973.96Show/hide
Query:  ILILLQLLPNAAGRTLPEKPAMVRRRELEMELKLKLQSLQRVRVPPSGPSGCTFIPGTNGPGCPLEVRHYAGNGSKQRPSTLRRYATPVRVVEALI
        IL+LLQL PN AGRTL EKP MVRR    MEL LKLQSLQRV VPPSGPSGCTFIPGTNGPGCPL+ RHY    S +RPST RR+A P RVV+AL+
Subjt:  ILILLQLLPNAAGRTLPEKPAMVRRRELEMELKLKLQSLQRVRVPPSGPSGCTFIPGTNGPGCPLEVRHYAGNGSKQRPSTLRRYATPVRVVEALI

TrEMBL top hitse value%identityAlignment
A0A0A0LA00 Uncharacterized protein4.2e-3174.75Show/hide
Query:  MAFILILLQLLPNAAGRTLPEKPAMVRRRELEMELKLKLQSLQRVRVPPSGPSGCTFIPGTNGPGCPLEVRHYAGNGSKQRPSTLRRYATPVRVVEALI
        MA +L+LLQL PN AGRTL EKP MVRR    MEL LKLQSLQRV VPPSGPSGCTFIPGTNGPGCPL+ RHY  N S QRPST RRYA P RVV+ L+
Subjt:  MAFILILLQLLPNAAGRTLPEKPAMVRRRELEMELKLKLQSLQRVRVPPSGPSGCTFIPGTNGPGCPLEVRHYAGNGSKQRPSTLRRYATPVRVVEALI

A0A5A7U6N3 Putative transmembrane protein2.3e-2973.96Show/hide
Query:  ILILLQLLPNAAGRTLPEKPAMVRRRELEMELKLKLQSLQRVRVPPSGPSGCTFIPGTNGPGCPLEVRHYAGNGSKQRPSTLRRYATPVRVVEALI
        IL+LLQL PN AGRTL EKP MVRR    MEL LKLQSLQRV VPPSGPSGCTFIPGTNGPGCPL+ RHY    S +RPST RR+A P RVV+AL+
Subjt:  ILILLQLLPNAAGRTLPEKPAMVRRRELEMELKLKLQSLQRVRVPPSGPSGCTFIPGTNGPGCPLEVRHYAGNGSKQRPSTLRRYATPVRVVEALI

A0A5D3CZY7 Putative transmembrane protein2.3e-2973.96Show/hide
Query:  ILILLQLLPNAAGRTLPEKPAMVRRRELEMELKLKLQSLQRVRVPPSGPSGCTFIPGTNGPGCPLEVRHYAGNGSKQRPSTLRRYATPVRVVEALI
        IL+LLQL PN AGRTL EKP MVRR    MEL LKLQSLQRV VPPSGPSGCTFIPGTNGPGCPL+ RHY    S +RPST RR+A P RVV+AL+
Subjt:  ILILLQLLPNAAGRTLPEKPAMVRRRELEMELKLKLQSLQRVRVPPSGPSGCTFIPGTNGPGCPLEVRHYAGNGSKQRPSTLRRYATPVRVVEALI

A0A5N6R1J5 Uncharacterized protein7.7e-0964.58Show/hide
Query:  RELEMELKLKLQSLQRVRVPPSGPSGCTFIPGTNGPGCPLEVRHYAGN
        R L  E  ++LQSLQR  VPPSG SGCT+IPGT GPGCP++  HYAG+
Subjt:  RELEMELKLKLQSLQRVRVPPSGPSGCTFIPGTNGPGCPLEVRHYAGN

A0A6J5TEP5 Uncharacterized protein5.0e-0843.96Show/hide
Query:  ILILLQLLPNAAGRTLPEKPAMVRRRELEMELKLKLQSLQRVRVPPSGPSGCTFIPGTNGPGCPLEVRHYAGNGSKQRPSTLRRYATPVRV
        +L LL + PN AGR L  + A + + EL     +  QSL R  +PPS  S CT+IPGT G GCPL+V++YAG+G     S   R   P  V
Subjt:  ILILLQLLPNAAGRTLPEKPAMVRRRELEMELKLKLQSLQRVRVPPSGPSGCTFIPGTNGPGCPLEVRHYAGNGSKQRPSTLRRYATPVRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTCATTCTTATTCTCTTGCAGCTTCTGCCAAACGCAGCTGGTAGGACGCTGCCTGAGAAGCCAGCAATGGTGAGAAGAAGGGAGCTGGAAATGGAGCTGAAGTT
GAAGCTGCAGTCTCTTCAGAGGGTCAGAGTGCCACCCTCTGGCCCCTCCGGTTGCACGTTCATTCCCGGCACCAACGGCCCTGGCTGTCCTCTCGAAGTGAGGCACTACG
CTGGCAACGGTTCAAAGCAACGTCCGAGCACACTCCGACGCTATGCCACCCCTGTTCGTGTCGTCGAGGCTCTCATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTCATTCTTATTCTCTTGCAGCTTCTGCCAAACGCAGCTGGTAGGACGCTGCCTGAGAAGCCAGCAATGGTGAGAAGAAGGGAGCTGGAAATGGAGCTGAAGTT
GAAGCTGCAGTCTCTTCAGAGGGTCAGAGTGCCACCCTCTGGCCCCTCCGGTTGCACGTTCATTCCCGGCACCAACGGCCCTGGCTGTCCTCTCGAAGTGAGGCACTACG
CTGGCAACGGTTCAAAGCAACGTCCGAGCACACTCCGACGCTATGCCACCCCTGTTCGTGTCGTCGAGGCTCTCATCTGA
Protein sequenceShow/hide protein sequence
MAFILILLQLLPNAAGRTLPEKPAMVRRRELEMELKLKLQSLQRVRVPPSGPSGCTFIPGTNGPGCPLEVRHYAGNGSKQRPSTLRRYATPVRVVEALI