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Carg06227 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06227
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description60S ribosomal protein L14-2-like
Genome locationCarg_Chr06:8425250..8427481
RNA-Seq ExpressionCarg06227
SyntenyCarg06227
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002784 - Ribosomal protein L14e domain
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR039660 - Ribosomal protein L14
IPR041985 - Ribosomal protein L14, KOW motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022924785.1 60S ribosomal protein L14-2-like [Cucurbita moschata]5.2e-6399.25Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
        SLNDFDRFKLMLAKIKRAGLVRQELAKL+KSES
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES

XP_022947422.1 60S ribosomal protein L14-2-like [Cucurbita moschata]2.3e-63100Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
        SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES

XP_022947433.1 60S ribosomal protein L14-2-like [Cucurbita moschata]8.9e-6399.25Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID KRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
        SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES

XP_022974504.1 60S ribosomal protein L14-2-like [Cucurbita maxima]1.2e-6299.25Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
        SL DFDRFKLMLAKIKRAGLVRQELAKLKKSES
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES

XP_038881110.1 60S ribosomal protein L14-2-like [Benincasa hispida]5.2e-6399.25Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLV+KRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
        SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES

TrEMBL top hitse value%identityAlignment
A0A6J1EG14 60S ribosomal protein L14-2-like2.5e-6399.25Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
        SLNDFDRFKLMLAKIKRAGLVRQELAKL+KSES
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES

A0A6J1G6E8 60S ribosomal protein L14-2-like1.1e-63100Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
        SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES

A0A6J1G6K6 60S ribosomal protein L14-2-like4.3e-6399.25Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID KRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
        SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES

A0A6J1IGF2 60S ribosomal protein L14-2-like1.1e-63100Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
        SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES

A0A6J1IT01 60S ribosomal protein L14-2-like2.5e-6399.25Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
        SLNDFDRFKLMLAKIKRAGLVRQELAKL+KSES
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKKSES

SwissProt top hitse value%identityAlignment
O46160 60S ribosomal protein L142.0e-2548.87Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAP--DMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKR
        M F+R+VEIGRVA   YG D GKLV IVDVIDQNRALVD P   + R  MNFK L LT++K       +   + +A +  ++ KKWE+S   +K+  K++
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAP--DMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKR

Query:  RASLNDFDRFKLMLAKIKRAGLVRQELAKLKKS
        R +L DF+RFKLM AK  R  L++ E  KL+K+
Subjt:  RASLNDFDRFKLMLAKIKRAGLVRQELAKLKKS

P55844 Probable 60S ribosomal protein L143.9e-5380.92Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        MPFKR+VEIGRVAL+NYG+DYG+LVVIVDVIDQ RALVDAPDM RS +NFKRLSLTD+KIDIKRVP+KK+LI+A++AADV+ KW  SSWGRKL+VKK RA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKKS
        +LNDFDRFK+MLAKIKRA  VRQELAKLKK+
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKKS

Q7XYA7 60S ribosomal protein L145.8e-2550Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPD--MVRSQMNFKRLSLTDIKI-DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKK
        M F R+VE GRVALV+YGE   KLVVIVD++DQNR LVD+P   + R  +N KR++LT IK+ DI R     E+     AA V + +  S WG+KL  ++
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPD--MVRSQMNFKRLSLTDIKI-DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKK

Query:  RRASLNDFDRFKLMLAKIKRAGLVRQELAKLK
        +RA+L+DF RFK+M+A++K++  +  ELAKLK
Subjt:  RRASLNDFDRFKLMLAKIKRAGLVRQELAKLK

Q9SIM4 60S ribosomal protein L14-11.0e-5383.85Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        M FKR+VEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDM R QMN KRLSLTDI IDI RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKK
        +LNDFDRFK+MLAKIKRAG+VRQELAKLK+
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKK

Q9T043 60S ribosomal protein L14-22.7e-5484.62Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        M FKRYVEIGRVALVNYGED+GKLVVIVDV+DQNRALVDAPDM R QMNFKRLSLTDI IDI RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKK
        +LNDFDRFK+MLAKIK+AG+VRQELAKLKK
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKK

Arabidopsis top hitse value%identityAlignment
AT2G20450.1 Ribosomal protein L147.3e-5583.85Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        M FKR+VEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDM R QMN KRLSLTDI IDI RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKK
        +LNDFDRFK+MLAKIKRAG+VRQELAKLK+
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKK

AT4G27090.1 Ribosomal protein L141.9e-5584.62Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        M FKRYVEIGRVALVNYGED+GKLVVIVDV+DQNRALVDAPDM R QMNFKRLSLTDI IDI RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKK
        +LNDFDRFK+MLAKIK+AG+VRQELAKLKK
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGTTCAAGAGGTACGTTGAGATCGGGAGAGTCGCTCTCGTCAACTATGGCGAAGACTACGGAAAGCTTGTCGTCATTGTCGATGTTATTGACCAAAATAGAGCTTT
GGTAGATGCTCCTGATATGGTCAGATCTCAAATGAACTTCAAGAGACTCTCTCTTACTGACATTAAAATTGACATTAAGAGAGTCCCTAGAAAGAAGGAACTCATTGAAG
CTATGAAGGCTGCTGATGTTCAGAAGAAGTGGGAGGATAGCTCTTGGGGAAGAAAACTACTCGTGAAGAAAAGAAGGGCATCACTTAATGATTTTGATAGGTTCAAGCTA
ATGTTGGCTAAGATAAAGAGAGCTGGATTGGTGAGGCAAGAGCTTGCAAAGCTGAAAAAGAGTGAATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGTTCAAGAGGTACGTTGAGATCGGGAGAGTCGCTCTCGTCAACTATGGCGAAGACTACGGAAAGCTTGTCGTCATTGTCGATGTTATTGACCAAAATAGAGCTTT
GGTAGATGCTCCTGATATGGTCAGATCTCAAATGAACTTCAAGAGACTCTCTCTTACTGACATTAAAATTGACATTAAGAGAGTCCCTAGAAAGAAGGAACTCATTGAAG
CTATGAAGGCTGCTGATGTTCAGAAGAAGTGGGAGGATAGCTCTTGGGGAAGAAAACTACTCGTGAAGAAAAGAAGGGCATCACTTAATGATTTTGATAGGTTCAAGCTA
ATGTTGGCTAAGATAAAGAGAGCTGGATTGGTGAGGCAAGAGCTTGCAAAGCTGAAAAAGAGTGAATCTTAGGAAGTGTATTTCTCTAGCGTCAAATTTTGTTACTAGTT
GAAGTTATCAGTTTTGGATTTTTTCACTTCAAGCCTCAGGAGTTCGGGGCTGTTCGGGGTTGTTTTGAGGTTTATGGAATTCTGAACATCTAGTGTAGCGAGTTTTTACT
TAATTTCTTCACAAGATGCCTATATCACTCCAATTAAGCATGTATCTGAATCTGCTGAGTGCTGATGTTTTTCTGCTCAACTGTTAAATCGGGTTTCTGTGGCTATGGAT
ATGGTTTTTGATTTCTATTTGCTTTTCTGAATTTTATGTCACTCTTACTTATACCCTGTGTTAGAAATATATCGTTGCTAACCAATTCATAGTGCAGTACCAAACACTTC
TATCTTCATTCTTCACTTTTATCAGAAGCTTTTCTATATCCTGATCGCTCTGGGCGGGTAGGACAAAACGCCACGAGCTTTGAGCAAACTCCTCTTAAAAAGCTTGATGG
GTTTCTCTTCTTCCTCAACCTTGGGATCAAGTAGTCCCAAAGGTGTTGACCTCTGATGTTAATGTTGCCTCCCAAATATGGCTTTCAGGGGTATCTTCTGGGAATGGTGA
TTTTTCAGATATTCTTTCCTCGTGTAAATCGCTCCATGTGGGGCTCGTGGTAGTAGAATAAGAACCAAACCATGGAGTTCTGAATGTTGCATATGAAAAGTTGGGTGAAA
AGCTCGGCGACAAGCCAGGCAACAGTGTTGACGTCGATGACGACGACGACAATGAAGGTGATAAACTACTTCCAAATCCTTGAATTTCTCTTGTTATTTTCAGAGCTTGC
AGACGTGATTCTTTT
Protein sequenceShow/hide protein sequence
MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKL
MLAKIKRAGLVRQELAKLKKSES