; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg06231 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06231
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionplastid-lipid-associated protein 6, chloroplastic
Genome locationCarg_Chr06:8411955..8413616
RNA-Seq ExpressionCarg06231
SyntenyCarg06231
Gene Ontology termsNA
InterPro domainsIPR006843 - Plastid lipid-associated protein/fibrillin conserved domain
IPR039633 - Plastid-lipid-associated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597353.1 Plastid-lipid-associated protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.0e-6657.8Show/hide
Query:  MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFKVKCSSRRPLRSGDGRPRRSFYLKSASDSSPSLVDDYKANSELLASLKIKLL----------
        MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFKVKCSSRRPLRSGDGRPRRSFYLKSASDSSPSLVDDYKANSELLASLKIKLL          
Subjt:  MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFKVKCSSRRPLRSGDGRPRRSFYLKSASDSSPSLVDDYKANSELLASLKIKLL----------

Query:  ------------------------------------------------------------------VEELFYCLLVLRS---------------------
                                                                          + ++F  + V+                       
Subjt:  ------------------------------------------------------------------VEELFYCLLVLRS---------------------

Query:  -----------GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS
                   GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS
Subjt:  -----------GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS

KAG7028817.1 Plastid-lipid-associated protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-88100Show/hide
Query:  MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFKVKCSSRRPLRSGDGRPRRSFYLKSASDSSPSLVDDYKANSELLASLKIKLLVEELFYCLLV
        MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFKVKCSSRRPLRSGDGRPRRSFYLKSASDSSPSLVDDYKANSELLASLKIKLLVEELFYCLLV
Subjt:  MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFKVKCSSRRPLRSGDGRPRRSFYLKSASDSSPSLVDDYKANSELLASLKIKLLVEELFYCLLV

Query:  LRSGSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS
        LRSGSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS
Subjt:  LRSGSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS

XP_022947374.1 plastid-lipid-associated protein 6, chloroplastic [Cucurbita moschata]5.0e-6657.09Show/hide
Query:  MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFKVKCSSRRPLRSGDGRPRRSFYLKSASDSSPSLVDDYKANSELLASLKIKLL----------
        MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFK+KCSSRRPLRSGDGRPRRSFYLKSASDSSPSLVDDYKAN+ELLASLKIKLL          
Subjt:  MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFKVKCSSRRPLRSGDGRPRRSFYLKSASDSSPSLVDDYKANSELLASLKIKLL----------

Query:  ------------------------------------------------------------------VEELFYCLLVLRS---------------------
                                                                          + ++F  + V+                       
Subjt:  ------------------------------------------------------------------VEELFYCLLVLRS---------------------

Query:  -----------GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS
                   GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS
Subjt:  -----------GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS

XP_022974499.1 plastid-lipid-associated protein 6, chloroplastic [Cucurbita maxima]1.5e-6254.96Show/hide
Query:  MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFKVKCSSRRPLRSGDGRPRRSFYLKSASDSSPSLVDDYKANSELLASLKIKLL----------
        MAA+A+SVLHSPLQICSSDSSSSGFLSP RIHGFAPNFK+KCSSRRPL SGDGRP+RSFYLKSASDSSPSL DDYKANSELLASLK+KLL          
Subjt:  MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFKVKCSSRRPLRSGDGRPRRSFYLKSASDSSPSLVDDYKANSELLASLKIKLL----------

Query:  ------------------------------------------------------------------VEELFYCLLVLRS---------------------
                                                                          + ++F  + V+                       
Subjt:  ------------------------------------------------------------------VEELFYCLLVLRS---------------------

Query:  -----------GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS
                   GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS
Subjt:  -----------GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS

XP_023521272.1 plastid-lipid-associated protein 6, chloroplastic-like [Cucurbita pepo subsp. pepo]7.0e-6054.26Show/hide
Query:  MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFKVKCSSRRPLRSGDGRPRRSFYLKSASDSSPSLVDDYKANSELLASLKIKLL----------
        MAALASSVLHSPLQICSSD SSSGFLSP RIHGFAP+FK+KCSSRRPL SGDGRPRRS YLKSASDS PSL DD KANSELLASLK+KLL          
Subjt:  MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFKVKCSSRRPLRSGDGRPRRSFYLKSASDSSPSLVDDYKANSELLASLKIKLL----------

Query:  ------------------------------------------------------------------VEELFYCLLVLRS---------------------
                                                                          + ++F  + V+                       
Subjt:  ------------------------------------------------------------------VEELFYCLLVLRS---------------------

Query:  -----------GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS
                   GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS
Subjt:  -----------GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS

TrEMBL top hitse value%identityAlignment
A0A1S3AX61 probable plastid-lipid-associated protein 6, chloroplastic4.2e-4244.98Show/hide
Query:  MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFKVKCSSRRPLRSGDGRPRRSFYLKSAS-------DSSPSLVDDYKANSELLASLKIKLL---
        MAALASSVL SPLQI +SD SS G L   RIH  AP+F +KCS R+ L SGDG  RR+  LKS S        S PS+VD+YKA SELLASLKIKLL   
Subjt:  MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFKVKCSSRRPLRSGDGRPRRSFYLKSAS-------DSSPSLVDDYKANSELLASLKIKLL---

Query:  -------------------------------------------------------------------------VEELFYCLLVLRS--------------
                                                                                 + ++F  + ++                
Subjt:  -------------------------------------------------------------------------VEELFYCLLVLRS--------------

Query:  ------------------GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS
                          GSAKIKITF+KTTVK TGNLSQLPPLEVPR+PDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS
Subjt:  ------------------GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS

A0A5D3D241 Putative plastid-lipid-associated protein 64.6e-4144.64Show/hide
Query:  MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFKVKCSSRRPLRSGDGRPRRSFYLKSAS-------DSSPSLVDDYKANSELLASLKIKLL---
        MAALASSVL SPLQI +SD SS G L   RIH  AP+F +KCS R+ L SG G  RR+  LKS S        S PS+VD+YKA SELLASLKIKLL   
Subjt:  MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFKVKCSSRRPLRSGDGRPRRSFYLKSAS-------DSSPSLVDDYKANSELLASLKIKLL---

Query:  -------------------------------------------------------------------------VEELFYCLLVLRS--------------
                                                                                 + ++F  + ++                
Subjt:  -------------------------------------------------------------------------VEELFYCLLVLRS--------------

Query:  ------------------GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS
                          GSAKIKITF+KTTVK TGNLSQLPPLEVPR+PDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS
Subjt:  ------------------GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS

A0A6J1D0Q0 plastid-lipid-associated protein 6, chloroplastic9.3e-4244.48Show/hide
Query:  MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFKVKCSSRRPLRSGDGRPRRSFYLKSASD--------SSPSLVDDYKANSELLASLKIKLL--
        MAAL SS+L SP QI   D SS GF SP RI   APN  +K S RRPL S DGRPRRSF LKSASD        +SPS+  + KANSELLASLK+KLL  
Subjt:  MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFKVKCSSRRPLRSGDGRPRRSFYLKSASD--------SSPSLVDDYKANSELLASLKIKLL--

Query:  --------------------------------------------------------------------------VEELFYCLLVLRS-------------
                                                                                  + ++F  + ++               
Subjt:  --------------------------------------------------------------------------VEELFYCLLVLRS-------------

Query:  -------------------GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS
                           GSAKIKITF+KTTVKATGNLSQLPPLE+PR+PDALRPPSNTGSGDFEVTYLD+DTRITRGDRGELRVFVIS
Subjt:  -------------------GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS

A0A6J1G6L7 plastid-lipid-associated protein 6, chloroplastic2.4e-6657.09Show/hide
Query:  MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFKVKCSSRRPLRSGDGRPRRSFYLKSASDSSPSLVDDYKANSELLASLKIKLL----------
        MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFK+KCSSRRPLRSGDGRPRRSFYLKSASDSSPSLVDDYKAN+ELLASLKIKLL          
Subjt:  MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFKVKCSSRRPLRSGDGRPRRSFYLKSASDSSPSLVDDYKANSELLASLKIKLL----------

Query:  ------------------------------------------------------------------VEELFYCLLVLRS---------------------
                                                                          + ++F  + V+                       
Subjt:  ------------------------------------------------------------------VEELFYCLLVLRS---------------------

Query:  -----------GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS
                   GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS
Subjt:  -----------GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS

A0A6J1IHR9 plastid-lipid-associated protein 6, chloroplastic7.3e-6354.96Show/hide
Query:  MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFKVKCSSRRPLRSGDGRPRRSFYLKSASDSSPSLVDDYKANSELLASLKIKLL----------
        MAA+A+SVLHSPLQICSSDSSSSGFLSP RIHGFAPNFK+KCSSRRPL SGDGRP+RSFYLKSASDSSPSL DDYKANSELLASLK+KLL          
Subjt:  MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFKVKCSSRRPLRSGDGRPRRSFYLKSASDSSPSLVDDYKANSELLASLKIKLL----------

Query:  ------------------------------------------------------------------VEELFYCLLVLRS---------------------
                                                                          + ++F  + V+                       
Subjt:  ------------------------------------------------------------------VEELFYCLLVLRS---------------------

Query:  -----------GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS
                   GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS
Subjt:  -----------GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS

SwissProt top hitse value%identityAlignment
Q9LW57 Plastid-lipid-associated protein 6, chloroplastic7.6e-2573.24Show/hide
Query:  GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS
        G+ KIKITF+KTTVK +GNLSQ+PP ++PRLPD+ RP SN G+GDFEVTY+D+  RITRGDRGELRVFVI+
Subjt:  GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS

Arabidopsis top hitse value%identityAlignment
AT3G23400.1 Plastid-lipid associated protein PAP / fibrillin family protein5.4e-2673.24Show/hide
Query:  GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS
        G+ KIKITF+KTTVK +GNLSQ+PP ++PRLPD+ RP SN G+GDFEVTY+D+  RITRGDRGELRVFVI+
Subjt:  GSAKIKITFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTCTAGCGAGCTCTGTGCTTCACTCGCCACTCCAGATCTGTTCTTCCGATTCTTCTTCTTCTGGGTTTCTATCTCCACCCAGAATCCATGGGTTTGCACCCAA
TTTCAAGGTCAAGTGTTCCAGCCGCCGGCCTCTGCGTTCCGGCGACGGCCGACCCAGAAGAAGTTTCTATTTGAAGTCGGCTTCCGATTCCTCTCCTTCTCTTGTTGATG
ATTACAAGGCTAACTCTGAACTGCTTGCATCGTTGAAGATCAAGCTACTGGTGGAAGAATTGTTCTATTGTCTACTTGTACTGAGATCAGGTTCTGCTAAGATAAAGATA
ACTTTTCAGAAAACCACCGTGAAAGCCACTGGAAACTTGTCACAGCTTCCTCCATTAGAGGTACCTCGGCTTCCAGATGCGCTAAGGCCTCCATCCAACACTGGAAGTGG
CGACTTTGAAGTCACTTACCTTGACAATGATACTCGGATCACCAGAGGAGATAGAGGAGAACTCAGAGTGTTTGTTATTTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCTCTAGCGAGCTCTGTGCTTCACTCGCCACTCCAGATCTGTTCTTCCGATTCTTCTTCTTCTGGGTTTCTATCTCCACCCAGAATCCATGGGTTTGCACCCAA
TTTCAAGGTCAAGTGTTCCAGCCGCCGGCCTCTGCGTTCCGGCGACGGCCGACCCAGAAGAAGTTTCTATTTGAAGTCGGCTTCCGATTCCTCTCCTTCTCTTGTTGATG
ATTACAAGGCTAACTCTGAACTGCTTGCATCGTTGAAGATCAAGCTACTGGTGGAAGAATTGTTCTATTGTCTACTTGTACTGAGATCAGGTTCTGCTAAGATAAAGATA
ACTTTTCAGAAAACCACCGTGAAAGCCACTGGAAACTTGTCACAGCTTCCTCCATTAGAGGTACCTCGGCTTCCAGATGCGCTAAGGCCTCCATCCAACACTGGAAGTGG
CGACTTTGAAGTCACTTACCTTGACAATGATACTCGGATCACCAGAGGAGATAGAGGAGAACTCAGAGTGTTTGTTATTTCATAA
Protein sequenceShow/hide protein sequence
MAALASSVLHSPLQICSSDSSSSGFLSPPRIHGFAPNFKVKCSSRRPLRSGDGRPRRSFYLKSASDSSPSLVDDYKANSELLASLKIKLLVEELFYCLLVLRSGSAKIKI
TFQKTTVKATGNLSQLPPLEVPRLPDALRPPSNTGSGDFEVTYLDNDTRITRGDRGELRVFVIS