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Carg06235 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06235
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEmbryo sac development arrest protein
Genome locationCarg_Chr06:8385683..8386060
RNA-Seq ExpressionCarg06235
SyntenyCarg06235
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597349.1 hypothetical protein SDJN03_10529, partial [Cucurbita argyrosperma subsp. sororia]8.3e-63100Show/hide
Query:  MSFHCHSRGLLSAGPSRKRKEPSALKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFPNAVAQYKKPKTEAAPPEIIKKEHQIQSYADVA
        MSFHCHSRGLLSAGPSRKRKEPSALKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFPNAVAQYKKPKTEAAPPEIIKKEHQIQSYADVA
Subjt:  MSFHCHSRGLLSAGPSRKRKEPSALKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFPNAVAQYKKPKTEAAPPEIIKKEHQIQSYADVA

Query:  TILKTDKAQISGIVNPTQLARWLTK
        TILKTDKAQISGIVNPTQLARWLTK
Subjt:  TILKTDKAQISGIVNPTQLARWLTK

KGN56835.1 hypothetical protein Csa_009887 [Cucumis sativus]7.3e-4374.62Show/hide
Query:  MSFHCHSRGLLSAGPSRKRKE---PSALKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASP--FPNAVAQYKKPKTEAAPPEIIKKEHQIQS
        MSFH HSRGLLSAGPS+KRKE   PSA KAGE  ++SNRLLAGYMAYEFLTKGT+ GRKFDP R EA+P     AV Q+KKPK++AAPPEI+KKEHQIQS
Subjt:  MSFHCHSRGLLSAGPSRKRKE---PSALKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASP--FPNAVAQYKKPKTEAAPPEIIKKEHQIQS

Query:  YADVATILKTDKAQISGIVNPTQLARWLTK
        YA+VA ILKT  + ISGIVNPTQL RWL K
Subjt:  YADVATILKTDKAQISGIVNPTQLARWLTK

XP_022924296.1 uncharacterized protein LOC111431827 [Cucurbita moschata]6.6e-4476.8Show/hide
Query:  MSFHCHSRGLLSAGPSRKRKEPSALKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFPNAVAQYKKPKTEAAPPEIIKKEHQIQSYADVA
        MSFH HSRGLL AGPSRKRKEP+ALKA E P++SNRLLAGYMAYEFLTKGTILGR+F+P RAEA   P+A AQ+KK K+EAAPPEI+KKEHQIQSY +VA
Subjt:  MSFHCHSRGLLSAGPSRKRKEPSALKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFPNAVAQYKKPKTEAAPPEIIKKEHQIQSYADVA

Query:  TILKTDKAQISGIVNPTQLARWLTK
        TILKT    I  IVNPTQL RWL K
Subjt:  TILKTDKAQISGIVNPTQLARWLTK

XP_023526927.1 uncharacterized protein LOC111790299 [Cucurbita pepo subsp. pepo]5.6e-4376Show/hide
Query:  MSFHCHSRGLLSAGPSRKRKEPSALKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFPNAVAQYKKPKTEAAPPEIIKKEHQIQSYADVA
        MSFH HSRGLL AGPSRKRKEP+ALKA E  ++SNRLLAGYMAYEFLTKGTILGR+F+P RAEA   P+A AQ+KK K+EAAPPEI+KKEHQIQSY +VA
Subjt:  MSFHCHSRGLLSAGPSRKRKEPSALKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFPNAVAQYKKPKTEAAPPEIIKKEHQIQSYADVA

Query:  TILKTDKAQISGIVNPTQLARWLTK
        TILKT    I  IVNPTQL RWL K
Subjt:  TILKTDKAQISGIVNPTQLARWLTK

XP_023539410.1 uncharacterized protein LOC111800062 [Cucurbita pepo subsp. pepo]3.3e-5995.24Show/hide
Query:  MSFHCHSRGLLSAGPSRKRKEPSALKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFPN-AVAQYKKPKTEAAPPEIIKKEHQIQSYADV
        MSFHCHSRGLLSAGPSRKRKEPSALKAGEQP+TSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFP  A AQYKKPKTEAAPPEIIKKEHQIQSY DV
Subjt:  MSFHCHSRGLLSAGPSRKRKEPSALKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFPN-AVAQYKKPKTEAAPPEIIKKEHQIQSYADV

Query:  ATILKTDKAQISGIVNPTQLARWLTK
        ATILKTDKAQISGIVNPTQLARWL+K
Subjt:  ATILKTDKAQISGIVNPTQLARWLTK

TrEMBL top hitse value%identityAlignment
A0A0A0L4C1 Uncharacterized protein3.6e-4374.62Show/hide
Query:  MSFHCHSRGLLSAGPSRKRKE---PSALKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASP--FPNAVAQYKKPKTEAAPPEIIKKEHQIQS
        MSFH HSRGLLSAGPS+KRKE   PSA KAGE  ++SNRLLAGYMAYEFLTKGT+ GRKFDP R EA+P     AV Q+KKPK++AAPPEI+KKEHQIQS
Subjt:  MSFHCHSRGLLSAGPSRKRKE---PSALKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASP--FPNAVAQYKKPKTEAAPPEIIKKEHQIQS

Query:  YADVATILKTDKAQISGIVNPTQLARWLTK
        YA+VA ILKT  + ISGIVNPTQL RWL K
Subjt:  YADVATILKTDKAQISGIVNPTQLARWLTK

A0A1S3AWH5 uncharacterized protein LOC1034835711.8e-4274.05Show/hide
Query:  MSFHCHSRGLLSAGPSRKRKEPSA----LKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFPNAVAQYKKPKTEAAPPEIIKKEH--QIQ
        MSFH HSRGLLSAGPS+KRKEPS      KAGE  + SNRLLAGYMAYEFLTKGT+ GRKFDP R EA+P   AV+Q+KKPK EAAPPEI+KKEH  QIQ
Subjt:  MSFHCHSRGLLSAGPSRKRKEPSA----LKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFPNAVAQYKKPKTEAAPPEIIKKEH--QIQ

Query:  SYADVATILKTDKAQISGIVNPTQLARWLTK
        SYA+VA ILKT  + ISGIVNPTQL RWL K
Subjt:  SYADVATILKTDKAQISGIVNPTQLARWLTK

A0A5A7U1L2 Uncharacterized protein1.8e-4274.05Show/hide
Query:  MSFHCHSRGLLSAGPSRKRKEPSA----LKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFPNAVAQYKKPKTEAAPPEIIKKEH--QIQ
        MSFH HSRGLLSAGPS+KRKEPS      KAGE  + SNRLLAGYMAYEFLTKGT+ GRKFDP R EA+P   AV+Q+KKPK EAAPPEI+KKEH  QIQ
Subjt:  MSFHCHSRGLLSAGPSRKRKEPSA----LKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFPNAVAQYKKPKTEAAPPEIIKKEH--QIQ

Query:  SYADVATILKTDKAQISGIVNPTQLARWLTK
        SYA+VA ILKT  + ISGIVNPTQL RWL K
Subjt:  SYADVATILKTDKAQISGIVNPTQLARWLTK

A0A6J1E960 uncharacterized protein LOC1114318273.2e-4476.8Show/hide
Query:  MSFHCHSRGLLSAGPSRKRKEPSALKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFPNAVAQYKKPKTEAAPPEIIKKEHQIQSYADVA
        MSFH HSRGLL AGPSRKRKEP+ALKA E P++SNRLLAGYMAYEFLTKGTILGR+F+P RAEA   P+A AQ+KK K+EAAPPEI+KKEHQIQSY +VA
Subjt:  MSFHCHSRGLLSAGPSRKRKEPSALKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFPNAVAQYKKPKTEAAPPEIIKKEHQIQSYADVA

Query:  TILKTDKAQISGIVNPTQLARWLTK
        TILKT    I  IVNPTQL RWL K
Subjt:  TILKTDKAQISGIVNPTQLARWLTK

A0A6J1IWN8 uncharacterized protein LOC1114792656.1e-4375.2Show/hide
Query:  MSFHCHSRGLLSAGPSRKRKEPSALKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFPNAVAQYKKPKTEAAPPEIIKKEHQIQSYADVA
        MSFH H RGLL  GPSRKRKEP+ALKA E P++SNRLLAGYMAYEFLTKGTILGR+F+P +AEA   P+A AQ+KK K+EAAPPEI+KKEHQIQSY +VA
Subjt:  MSFHCHSRGLLSAGPSRKRKEPSALKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFPNAVAQYKKPKTEAAPPEIIKKEHQIQSYADVA

Query:  TILKTDKAQISGIVNPTQLARWLTK
        TILKT  A I  IVNPTQL RWL K
Subjt:  TILKTDKAQISGIVNPTQLARWLTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04000.1 unknown protein7.1e-1241.84Show/hide
Query:  AGEQPITSNRL-LAGYMAYEFLTKGTILGRKFDPDRAEASPFPNAVAQYKKPKTEAAPPEIIKKEHQIQSYADVATILKTDKAQISGIVNPTQLARWL
        A  +PI SN+L LAGY+++E+LT+GT+ G +++  RA+A       +   KP     P E  + E + + Y +VA +L++D AQ+ GIVNP QLAR+L
Subjt:  AGEQPITSNRL-LAGYMAYEFLTKGTILGRKFDPDRAEASPFPNAVAQYKKPKTEAAPPEIIKKEHQIQSYADVATILKTDKAQISGIVNPTQLARWL

AT3G23440.1 embryo sac development arrest 64.5e-1440.91Show/hide
Query:  GPSRKRKEPSALKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFPNAVAQYKKPKTEAAPPEIIKKEHQIQSYADVATILKTDKAQISGI
        G SRKRK+  +     +  T N LLAGYMA+E+LT GT+LGRK     AE  P               +P +  + +   QSY++VA++ KTD   + G+
Subjt:  GPSRKRKEPSALKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFPNAVAQYKKPKTEAAPPEIIKKEHQIQSYADVATILKTDKAQISGI

Query:  VNPTQLARWL
        VNPTQLA+W+
Subjt:  VNPTQLARWL

AT5G44060.1 unknown protein1.8e-1536.75Show/hide
Query:  SRGLLSAGPSRKRKEPSALKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFPNAVAQYKKPKTEAAPPEIIKKEHQIQSYADVATILKTD
        ++ ++   P   R   +A  A  +P+ SN+LLAGY+A+EFL  GT+ G  ++P +A+A P      Q   P+      +I   +H+ + Y +VA IL+ D
Subjt:  SRGLLSAGPSRKRKEPSALKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFPNAVAQYKKPKTEAAPPEIIKKEHQIQSYADVATILKTD

Query:  KAQISGIVNPTQLARWL
           + GIVNP+QLAR+L
Subjt:  KAQISGIVNPTQLARWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTCCATTGCCACAGCCGTGGGCTGTTATCAGCTGGGCCGTCAAGAAAGCGGAAGGAGCCGTCGGCTCTTAAAGCCGGTGAGCAGCCAATTACGTCGAACCGGCT
TCTGGCCGGGTACATGGCTTATGAGTTTCTGACCAAAGGAACCATCTTGGGCAGGAAGTTCGACCCGGATCGAGCCGAAGCAAGCCCATTCCCGAACGCCGTTGCTCAGT
ACAAGAAGCCGAAGACGGAAGCCGCGCCGCCGGAGATCATAAAAAAAGAGCATCAGATTCAGAGCTACGCCGACGTGGCAACCATTTTGAAGACGGATAAGGCCCAGATA
TCCGGCATCGTCAACCCGACCCAACTGGCTCGGTGGCTTACCAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTCCATTGCCACAGCCGTGGGCTGTTATCAGCTGGGCCGTCAAGAAAGCGGAAGGAGCCGTCGGCTCTTAAAGCCGGTGAGCAGCCAATTACGTCGAACCGGCT
TCTGGCCGGGTACATGGCTTATGAGTTTCTGACCAAAGGAACCATCTTGGGCAGGAAGTTCGACCCGGATCGAGCCGAAGCAAGCCCATTCCCGAACGCCGTTGCTCAGT
ACAAGAAGCCGAAGACGGAAGCCGCGCCGCCGGAGATCATAAAAAAAGAGCATCAGATTCAGAGCTACGCCGACGTGGCAACCATTTTGAAGACGGATAAGGCCCAGATA
TCCGGCATCGTCAACCCGACCCAACTGGCTCGGTGGCTTACCAAATAA
Protein sequenceShow/hide protein sequence
MSFHCHSRGLLSAGPSRKRKEPSALKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFPNAVAQYKKPKTEAAPPEIIKKEHQIQSYADVATILKTDKAQI
SGIVNPTQLARWLTK