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Carg06239 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06239
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAcidic leucine-rich nuclear phosphoprotein 32-related protein 2
Genome locationCarg_Chr06:8359737..8360283
RNA-Seq ExpressionCarg06239
SyntenyCarg06239
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582410.1 hypothetical protein SDJN03_22412, partial [Cucurbita argyrosperma subsp. sororia]5.0e-3384.21Show/hide
Query:  MGGDSKDV----EEAVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
        MGGDS+ V    E +VDS AAGEVGD  NGED SESNALLPPRRGGMSRKSNKPRMKVRW DSNGNNLAEILEFQPSDVSDSGDEE DSCSC+IM
Subjt:  MGGDSKDV----EEAVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
KAG6597344.1 hypothetical protein SDJN03_10524, partial [Cucurbita argyrosperma subsp. sororia]1.0e-41100Show/hide
Query:  MGGDSKDVEEAVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
        MGGDSKDVEEAVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
Subjt:  MGGDSKDVEEAVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
XP_004134046.1 uncharacterized protein LOC101205158 [Cucumis sativus]5.0e-3384.95Show/hide
Query:  GDSKDV----EEAVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
        GDSKDV    E+ +DS AAGEVGD  NGE+YSESNALLPPRRGGMSRK NKPRMKVRW DSNGNNLAEILEFQPSDVSDSGDEE DSCSCIIM
Subjt:  GDSKDV----EEAVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
XP_022924268.1 uncharacterized protein LOC111431793 [Cucurbita moschata]5.0e-3384.21Show/hide
Query:  MGGDSKDV----EEAVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
        MGGDS+ V    E +VDS AAGEVGD  NGED SESNALLPPRRGGMSRKSNKPRMKVRW DSNGNNLAEILEFQPSDVSDSGDEE DSCSC+IM
Subjt:  MGGDSKDV----EEAVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
XP_038897861.1 uncharacterized protein LOC120085750 [Benincasa hispida]1.0e-3384.21Show/hide
Query:  MGGDSKDV----EEAVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
        M GDSKDV    E+ +DS A GEVGD  NGE+YSESNALLPPRRGGMSRKSNKPRMKVRW DSNGNNLAEILEFQPSDVSDSGDEE DSCSCIIM
Subjt:  MGGDSKDV----EEAVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
TrEMBL top hitse value%identityAlignment
A0A0A0L701 Uncharacterized protein2.4e-3384.95Show/hide
Query:  GDSKDV----EEAVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
        GDSKDV    E+ +DS AAGEVGD  NGE+YSESNALLPPRRGGMSRK NKPRMKVRW DSNGNNLAEILEFQPSDVSDSGDEE DSCSCIIM
Subjt:  GDSKDV----EEAVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
A0A1S3AX40 uncharacterized protein LOC103483558 isoform X25.1e-3183.52Show/hide
Query:  MGGDSKDV----EEAVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCS
        M GDSKDV    E+ +DS AAGEVGD  NGE+YSESNALLPPRRGGMSRK NKPRMKVRW DSNGNNLAEILEFQPSDVSDSGDEE DSCS
Subjt:  MGGDSKDV----EEAVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCS
A0A5A7U1V8 Uncharacterized protein5.1e-3183.52Show/hide
Query:  MGGDSKDV----EEAVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCS
        M GDSKDV    E+ +DS AAGEVGD  NGE+YSESNALLPPRRGGMSRK NKPRMKVRW DSNGNNLAEILEFQPSDVSDSGDEE DSCS
Subjt:  MGGDSKDV----EEAVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCS
A0A6J1EBY1 uncharacterized protein LOC1114317932.4e-3384.21Show/hide
Query:  MGGDSKDV----EEAVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
        MGGDS+ V    E +VDS AAGEVGD  NGED SESNALLPPRRGGMSRKSNKPRMKVRW DSNGNNLAEILEFQPSDVSDSGDEE DSCSC+IM
Subjt:  MGGDSKDV----EEAVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
A0A6J1INK9 uncharacterized protein LOC1114791201.2e-3283.16Show/hide
Query:  MGGDSKDV----EEAVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
        MGGDS+ V    E +VDS AAGEVGD  N ED SESNALLPPRRGGMSRKSNKPRMKVRW DSNGNNLAEILEFQPSDVSDSGDEE DSCSC+IM
Subjt:  MGGDSKDV----EEAVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G34010.1 unknown protein5.2e-0446.67Show/hide
Query:  RMKVRWTDSNGNNLAEILEFQPSDVSDSGDE----EDDSCSCIIM
        R KV+W D+ G  +AE+ EF+PS+V +S DE       SC C IM
Subjt:  RMKVRWTDSNGNNLAEILEFQPSDVSDSGDE----EDDSCSCIIM
AT1G55475.1 unknown protein3.1e-0444.19Show/hide
Query:  KPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
        + + KV+W D  G  LAEI EF+PSD  D   +   +C CII+
Subjt:  KPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
AT2G33390.1 unknown protein7.7e-1648.78Show/hide
Query:  EAVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
        +A+ S+ + E+ D    E+ SES  LLPPR+GGMSR ++K +  V+W D  G+NLAE+L ++PS+VSD+ D++ DSC C IM
Subjt:  EAVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGCGATTCTAAGGATGTTGAAGAGGCTGTGGATTCTGTGGCTGCCGGAGAAGTTGGGGATTCCGGTAACGGCGAAGATTACAGTGAATCGAATGCTCTATTGCC
GCCCCGGCGCGGCGGAATGTCGAGGAAATCGAATAAGCCGAGGATGAAAGTCCGGTGGACTGATAGTAATGGTAATAATCTAGCGGAGATTTTGGAGTTTCAACCGAGCG
ATGTGAGCGACTCGGGGGACGAGGAGGACGATTCTTGCAGCTGTATAATTATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGCGATTCTAAGGATGTTGAAGAGGCTGTGGATTCTGTGGCTGCCGGAGAAGTTGGGGATTCCGGTAACGGCGAAGATTACAGTGAATCGAATGCTCTATTGCC
GCCCCGGCGCGGCGGAATGTCGAGGAAATCGAATAAGCCGAGGATGAAAGTCCGGTGGACTGATAGTAATGGTAATAATCTAGCGGAGATTTTGGAGTTTCAACCGAGCG
ATGTGAGCGACTCGGGGGACGAGGAGGACGATTCTTGCAGCTGTATAATTATGTAG
Protein sequenceShow/hide protein sequence
MGGDSKDVEEAVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM