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Carg06256 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06256
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionlate embryogenesis abundant protein 1-like
Genome locationCarg_Chr06:8281790..8285056
RNA-Seq ExpressionCarg06256
SyntenyCarg06256
Gene Ontology termsNA
InterPro domainsIPR039624 - Stress-induced protein KIN1/KIN2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597327.1 Late embryogenesis abundant protein 7, partial [Cucurbita argyrosperma subsp. sororia]3.4e-2996.2Show/hide
Query:  MSSMQQSFKADQSEGDREEWNRSEMESANQTRDEAATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK
        MSS+ QSFKADQSEG+REEWNRSEMESANQTRDEAATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK
Subjt:  MSSMQQSFKADQSEGDREEWNRSEMESANQTRDEAATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK

KAG7028793.1 hypothetical protein SDJN02_09974, partial [Cucurbita argyrosperma subsp. argyrosperma]6.9e-147100Show/hide
Query:  MSSMQQSFKADQSEGDREEWNRSEMESANQTRDEAATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDKIDNASHEDNNEYGSWVFRLII
        MSSMQQSFKADQSEGDREEWNRSEMESANQTRDEAATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDKIDNASHEDNNEYGSWVFRLII
Subjt:  MSSMQQSFKADQSEGDREEWNRSEMESANQTRDEAATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDKIDNASHEDNNEYGSWVFRLII

Query:  RVLPGLLEQNCVLISVLPKLPSCGSFIRPNQGRHPLPTRRNNHAPFLFSSRLVALWLTKTFSSNPTTLAGATPFPPTAGLPPRTPLPLPLPLPLPLPLPL
        RVLPGLLEQNCVLISVLPKLPSCGSFIRPNQGRHPLPTRRNNHAPFLFSSRLVALWLTKTFSSNPTTLAGATPFPPTAGLPPRTPLPLPLPLPLPLPLPL
Subjt:  RVLPGLLEQNCVLISVLPKLPSCGSFIRPNQGRHPLPTRRNNHAPFLFSSRLVALWLTKTFSSNPTTLAGATPFPPTAGLPPRTPLPLPLPLPLPLPLPL

Query:  PRQCRHIKLPNSNPPDFNQNSPNPTLFSTEHNETLLFNPLIHSAFSRFLERTTTMAGQAELIPFYQLPF
        PRQCRHIKLPNSNPPDFNQNSPNPTLFSTEHNETLLFNPLIHSAFSRFLERTTTMAGQAELIPFYQLPF
Subjt:  PRQCRHIKLPNSNPPDFNQNSPNPTLFSTEHNETLLFNPLIHSAFSRFLERTTTMAGQAELIPFYQLPF

XP_022951202.1 late embryogenesis abundant protein 1-like [Cucurbita moschata]9.0e-3094.94Show/hide
Query:  MSSMQQSFKADQSEGDREEWNRSEMESANQTRDEAATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK
        MSSMQQSFKADQSEG+REEWNRS MES NQTRDE ATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK
Subjt:  MSSMQQSFKADQSEGDREEWNRSEMESANQTRDEAATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK

XP_022975680.1 late embryogenesis abundant protein 1-like [Cucurbita maxima]1.3e-2892.41Show/hide
Query:  MSSMQQSFKADQSEGDREEWNRSEMESANQTRDEAATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK
        MSSMQ SFKADQSEG+RE WNRSEMES NQTRDEAATTTAHA+KQE SGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK
Subjt:  MSSMQQSFKADQSEGDREEWNRSEMESANQTRDEAATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK

XP_023538942.1 late embryogenesis abundant protein 7-like [Cucurbita pepo subsp. pepo]4.8e-3197.47Show/hide
Query:  MSSMQQSFKADQSEGDREEWNRSEMESANQTRDEAATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK
        MSSMQQSFKADQSEG+REEWNRSE+ESANQTRDEAATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK
Subjt:  MSSMQQSFKADQSEGDREEWNRSEMESANQTRDEAATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK

TrEMBL top hitse value%identityAlignment
A0A498I8F1 Uncharacterized protein3.2e-0950.56Show/hide
Query:  MSSMQQSFKADQSEGD----REEWNRSEMESANQTRD------EAATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK
        MSSMQQ F A QS+G      EEW +S  E+A+Q R+      ++A  +A   K +++GFLQQTGEQ+M+MA GA+D+VKNTLG N+ K
Subjt:  MSSMQQSFKADQSEGD----REEWNRSEMESANQTRD------EAATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK

A0A540KXA1 Uncharacterized protein3.2e-0950.56Show/hide
Query:  MSSMQQSFKADQSEGD----REEWNRSEMESANQTRD------EAATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK
        MSSMQQ F A QS+G      EEW +S  E+A+Q R+      ++A  +A   K +++GFLQQTGEQ+M+MA GA+D+VKNTLG N+ K
Subjt:  MSSMQQSFKADQSEGD----REEWNRSEMESANQTRD------EAATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK

A0A5N5FA15 Late embryogenesis abundant protein 13.2e-0950.56Show/hide
Query:  MSSMQQSFKADQSEGD----REEWNRSEMESANQTRD------EAATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK
        MSSMQQ F A QS+G      EEW +S  E+A+Q R+      ++A  +A   K +++GFLQQTGEQ+M+MA GA+D+VKNTLG N+ K
Subjt:  MSSMQQSFKADQSEGD----REEWNRSEMESANQTRD------EAATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK

A0A6J1GH10 late embryogenesis abundant protein 1-like4.4e-3094.94Show/hide
Query:  MSSMQQSFKADQSEGDREEWNRSEMESANQTRDEAATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK
        MSSMQQSFKADQSEG+REEWNRS MES NQTRDE ATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK
Subjt:  MSSMQQSFKADQSEGDREEWNRSEMESANQTRDEAATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK

A0A6J1IHE2 late embryogenesis abundant protein 1-like6.3e-2992.41Show/hide
Query:  MSSMQQSFKADQSEGDREEWNRSEMESANQTRDEAATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK
        MSSMQ SFKADQSEG+RE WNRSEMES NQTRDEAATTTAHA+KQE SGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK
Subjt:  MSSMQQSFKADQSEGDREEWNRSEMESANQTRDEAATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK

SwissProt top hitse value%identityAlignment
Q96270 Late embryogenesis abundant protein 78.8e-0450.94Show/hide
Query:  NQTRDEAATT--TAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK
        N+  D A  T  TA A K++ SG L QTGEQ+  MA GA D VK+TLG   D+
Subjt:  NQTRDEAATT--TAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK

Arabidopsis top hitse value%identityAlignment
AT1G52690.1 Late embryogenesis abundant protein (LEA) family protein6.3e-0550.94Show/hide
Query:  NQTRDEAATT--TAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK
        N+  D A  T  TA A K++ SG L QTGEQ+  MA GA D VK+TLG   D+
Subjt:  NQTRDEAATT--TAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK

AT1G52690.2 Late embryogenesis abundant protein (LEA) family protein6.3e-0550.94Show/hide
Query:  NQTRDEAATT--TAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK
        N+  D A  T  TA A K++ SG L QTGEQ+  MA GA D VK+TLG   D+
Subjt:  NQTRDEAATT--TAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDK

AT4G13560.1 Late embryogenesis abundant protein (LEA) family protein6.9e-0434.58Show/hide
Query:  QQSFKADQSEGDREEWNRSEMESANQT---------------RDEAATTT-----------------AHASKQEASGFLQQTGEQMMHMAQGAVDTVKNT
        QQ F A Q+ G  +E      ESA QT               RD+AA  T                 A  ++++A+G   QTGE + +MAQGA+D VKN+
Subjt:  QQSFKADQSEGDREEWNRSEMESANQT---------------RDEAATTT-----------------AHASKQEASGFLQQTGEQMMHMAQGAVDTVKNT

Query:  LGFNDDK
        LG N+ K
Subjt:  LGFNDDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAGCATGCAACAATCGTTCAAGGCGGACCAATCCGAGGGTGACCGTGAAGAATGGAATAGATCGGAAATGGAATCGGCAAACCAAACGAGGGACGAGGCAGCTAC
TACTACTGCCCATGCAAGCAAGCAAGAAGCTTCTGGGTTTCTCCAACAGACGGGAGAGCAAATGATGCATATGGCTCAAGGTGCTGTAGACACTGTGAAGAACACGCTTG
GATTCAATGACGACAAGATTGATAATGCAAGTCACGAAGACAATAATGAATATGGGTCTTGGGTTTTTAGACTTATTATCCGCGTTTTGCCGGGATTGTTGGAGCAGAAC
TGCGTTCTTATATCCGTACTTCCAAAATTGCCCTCATGTGGCAGCTTTATTCGACCAAATCAAGGACGCCACCCGCTTCCTACCCGCCGGAACAATCACGCTCCATTTCT
CTTCTCGTCTCGTCTCGTCGCTCTCTGGCTCACCAAAACCTTCTCTTCCAATCCCACAACCCTCGCCGGAGCTACACCATTTCCGCCGACGGCAGGCCTTCCACCACGCA
CCCCTCTGCCATTGCCATTGCCATTGCCATTGCCATTGCCATTGCCATTGCCTCGTCAATGCCGGCATATAAAGCTTCCAAACTCCAACCCTCCCGACTTCAATCAAAAT
TCTCCCAATCCCACCTTATTCTCTACTGAGCACAACGAAACTCTTCTATTCAATCCTCTCATTCATTCTGCATTTTCACGGTTTCTCGAACGAACGACGACAATGGCAGG
CCAAGCGGAGCTTATCCCTTTTTATCAGCTTCCGTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTAGCATGCAACAATCGTTCAAGGCGGACCAATCCGAGGGTGACCGTGAAGAATGGAATAGATCGGAAATGGAATCGGCAAACCAAACGAGGGACGAGGCAGCTAC
TACTACTGCCCATGCAAGCAAGCAAGAAGCTTCTGGGTTTCTCCAACAGACGGGAGAGCAAATGATGCATATGGCTCAAGGTGCTGTAGACACTGTGAAGAACACGCTTG
GATTCAATGACGACAAGATTGATAATGCAAGTCACGAAGACAATAATGAATATGGGTCTTGGGTTTTTAGACTTATTATCCGCGTTTTGCCGGGATTGTTGGAGCAGAAC
TGCGTTCTTATATCCGTACTTCCAAAATTGCCCTCATGTGGCAGCTTTATTCGACCAAATCAAGGACGCCACCCGCTTCCTACCCGCCGGAACAATCACGCTCCATTTCT
CTTCTCGTCTCGTCTCGTCGCTCTCTGGCTCACCAAAACCTTCTCTTCCAATCCCACAACCCTCGCCGGAGCTACACCATTTCCGCCGACGGCAGGCCTTCCACCACGCA
CCCCTCTGCCATTGCCATTGCCATTGCCATTGCCATTGCCATTGCCATTGCCTCGTCAATGCCGGCATATAAAGCTTCCAAACTCCAACCCTCCCGACTTCAATCAAAAT
TCTCCCAATCCCACCTTATTCTCTACTGAGCACAACGAAACTCTTCTATTCAATCCTCTCATTCATTCTGCATTTTCACGGTTTCTCGAACGAACGACGACAATGGCAGG
CCAAGCGGAGCTTATCCCTTTTTATCAGCTTCCGTTCTGA
Protein sequenceShow/hide protein sequence
MSSMQQSFKADQSEGDREEWNRSEMESANQTRDEAATTTAHASKQEASGFLQQTGEQMMHMAQGAVDTVKNTLGFNDDKIDNASHEDNNEYGSWVFRLIIRVLPGLLEQN
CVLISVLPKLPSCGSFIRPNQGRHPLPTRRNNHAPFLFSSRLVALWLTKTFSSNPTTLAGATPFPPTAGLPPRTPLPLPLPLPLPLPLPLPRQCRHIKLPNSNPPDFNQN
SPNPTLFSTEHNETLLFNPLIHSAFSRFLERTTTMAGQAELIPFYQLPF