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Carg06262 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06262
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionF-box domain-containing protein
Genome locationCarg_Chr06:8237524..8240571
RNA-Seq ExpressionCarg06262
SyntenyCarg06262
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597321.1 hypothetical protein SDJN03_10501, partial [Cucurbita argyrosperma subsp. sororia]4.2e-143100Show/hide
Query:  MAHSGLLGGGMRWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLA
        MAHSGLLGGGMRWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLA
Subjt:  MAHSGLLGGGMRWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLA

Query:  QTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIVGDGKIREH
        QTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIVGDGKIREH
Subjt:  QTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIVGDGKIREH

Query:  YVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL
        YVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL
Subjt:  YVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL

KAG7028788.1 hypothetical protein SDJN02_09969 [Cucurbita argyrosperma subsp. argyrosperma]4.2e-143100Show/hide
Query:  MAHSGLLGGGMRWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLA
        MAHSGLLGGGMRWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLA
Subjt:  MAHSGLLGGGMRWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLA

Query:  QTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIVGDGKIREH
        QTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIVGDGKIREH
Subjt:  QTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIVGDGKIREH

Query:  YVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL
        YVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL
Subjt:  YVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL

XP_022974484.1 uncharacterized protein LOC111473162 [Cucurbita maxima]1.9e-13595.49Show/hide
Query:  MAHSGLLGGGMRWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLA
        MAH GLLG  +RWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLL+AILGYVDSRSVALSLLVSRSWY IASSDSLWSSKCVELWLGKAHIPRLA
Subjt:  MAHSGLLGGGMRWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLA

Query:  QTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIVGDGKIREH
        QTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAW+FHFNKEAPVYWRDLDPYWQGSH LMRRYFH DGSQTADPDDRVWGGHECCFSTVTTIV DGKIREH
Subjt:  QTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIVGDGKIREH

Query:  YVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL
        YVRINKWPRMLVSRNEDWSWEMSNHFTSYSSI DAEKDGGTGPL
Subjt:  YVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL

XP_023539867.1 uncharacterized protein LOC111800413 [Cucurbita pepo subsp. pepo]2.1e-13997.13Show/hide
Query:  MAHSGLLGGGMRWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLA
        MAHSGLLGGG+RWKTRKKMRENVSDERGQQNGTL+VLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLA
Subjt:  MAHSGLLGGGMRWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLA

Query:  QTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIVGDGKIREH
        QTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLM RYFH DG+QTADPDDRVWGGHECCFSTVTTI+GDGKIREH
Subjt:  QTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIVGDGKIREH

Query:  YVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL
        YVRIN+WPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL
Subjt:  YVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL

XP_038875840.1 uncharacterized protein LOC120068200 [Benincasa hispida]6.1e-12688.93Show/hide
Query:  MAHSGLLGGGMRWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLA
        MA S LLGGG RWKTRKK RENVSD R QQNGT +VLLQDPFEVLGSDL MAIL Y+D+RSVALSLLVSRSWY IASSD LWSSKC ELWLGKAHIPRLA
Subjt:  MAHSGLLGGGMRWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLA

Query:  QTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIVGDGKIREH
        Q+RGLPK+AAYSLSVMDG RTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSH LMRRYFHPDGSQTADPDDRVWGGHE CF TVT+ VGDG+IREH
Subjt:  QTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIVGDGKIREH

Query:  YVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL
        YVRINKWPRM VSRNEDWSW+MSNHFTSYSSIADAEK GGTGPL
Subjt:  YVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL

TrEMBL top hitse value%identityAlignment
A0A0A0L471 F-box domain-containing protein4.9e-12185.02Show/hide
Query:  MAHSGLLGGGMRWKTR--KKMRENVSDERGQQNG-TLSVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIP
        MA S  LGGG RWK+R  KK RE VSDERGQQN  T + LLQDPFEVLGSDLL+AIL Y+D+RSVALSL VSRSWY +ASSD LWSSKC+ELWLGKAHIP
Subjt:  MAHSGLLGGGMRWKTR--KKMRENVSDERGQQNG-TLSVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIP

Query:  RLAQTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIVGDGKI
        RLAQ+RGLPK+AAYSLSVMDG RTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSH LMRRYFHPDG+QTADPDDRVWGGHE CFSTVT+ VGDG+I
Subjt:  RLAQTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIVGDGKI

Query:  REHYVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL
        REHYVRIN+WPRM VSRNEDWSW MSNHFTSYSSIAD EK GGTGPL
Subjt:  REHYVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL

A0A1S3AWZ4 uncharacterized protein LOC103483521 isoform X11.6e-11982.28Show/hide
Query:  MAHSGLLGGGMRWKTR---------KKMRENVSDERGQQN-GTLSVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELW
        MA S  L GG RWKTR         KK RE VSDERGQQN  T + +LQDPFEVLGSDLLM IL Y+D+RSVALSLLVSRSWY +ASSD LWSSKC+ELW
Subjt:  MAHSGLLGGGMRWKTR---------KKMRENVSDERGQQN-GTLSVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELW

Query:  LGKAHIPRLAQTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTT
        LGKAHIPRLAQ+RGLPK+AAYSLS+MDG RTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSH LMRRYFHPDGSQTADPDDRVWGGHE CFSTVT+
Subjt:  LGKAHIPRLAQTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTT

Query:  IVGDGKIREHYVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL
         VGDG+IREHYVRIN+WPRM VSRNEDWSW MSNHFTSYSSIAD +K GGTGPL
Subjt:  IVGDGKIREHYVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL

A0A5D3D180 F-box family protein6.6e-11881.75Show/hide
Query:  MAHSGLLGGGMRWKTR-------KKMRENVSDERGQQN-GTLSVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLG
        MA S  L  G RWKTR       KK RE VSDERGQQN  T + +LQDPFEVLGSDLLM IL Y+D+RSVALSLLVSRSWY +ASSD LWSSKC+ELW G
Subjt:  MAHSGLLGGGMRWKTR-------KKMRENVSDERGQQN-GTLSVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLG

Query:  KAHIPRLAQTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIV
        KAHIPRLAQ+RGLPK+AAYSLS+MDG RTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSH LMRRYFHPDGSQTADPDDRVWGGHE CFSTVT+ V
Subjt:  KAHIPRLAQTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIV

Query:  GDGKIREHYVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL
        GDG+IREHYVRIN+WPRM VSRNEDWSW MSNHFTSY SIAD +K GGTGPL
Subjt:  GDGKIREHYVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL

A0A6J1FWM7 uncharacterized protein LOC1114488354.5e-11997.61Show/hide
Query:  MAHSGLLGGGMRWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLA
        MAHSGLLGGG+RWKTRKKMRENVSDERGQQNGTL+VLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLG AHIPRLA
Subjt:  MAHSGLLGGGMRWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLA

Query:  QTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIVGDGKIREH
        QTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTT+VGDGKIREH
Subjt:  QTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIVGDGKIREH

Query:  YVRINKWPR
        YVRINKWP+
Subjt:  YVRINKWPR

A0A6J1IHQ4 uncharacterized protein LOC1114731629.1e-13695.49Show/hide
Query:  MAHSGLLGGGMRWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLA
        MAH GLLG  +RWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLL+AILGYVDSRSVALSLLVSRSWY IASSDSLWSSKCVELWLGKAHIPRLA
Subjt:  MAHSGLLGGGMRWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLA

Query:  QTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIVGDGKIREH
        QTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAW+FHFNKEAPVYWRDLDPYWQGSH LMRRYFH DGSQTADPDDRVWGGHECCFSTVTTIV DGKIREH
Subjt:  QTRGLPKMAAYSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIVGDGKIREH

Query:  YVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL
        YVRINKWPRMLVSRNEDWSWEMSNHFTSYSSI DAEKDGGTGPL
Subjt:  YVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGGTGPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCATAGCGGCTTACTCGGAGGCGGAATGCGGTGGAAAACAAGGAAGAAAATGCGAGAGAATGTCTCCGATGAACGAGGCCAACAAAATGGAACCCTAAGTGTTCT
TCTCCAAGACCCTTTCGAGGTTTTGGGTTCTGATCTATTAATGGCGATTCTTGGCTACGTTGATTCACGCAGCGTGGCACTTTCTCTTCTTGTCTCTCGATCCTGGTATG
GAATTGCTTCCAGCGATTCCCTATGGAGTTCTAAGTGTGTGGAACTGTGGCTTGGGAAAGCACATATCCCTAGATTGGCGCAAACCCGAGGTCTTCCAAAGATGGCTGCC
TATTCATTATCTGTCATGGATGGCAATCGGACTCGCATTATGAGGGAGGATTTATGTGACCACGCTTGGCAATTTCACTTCAATAAGGAAGCTCCTGTTTACTGGCGAGA
TCTTGATCCGTATTGGCAAGGTAGCCACCTTCTCATGCGCCGTTATTTCCACCCCGATGGGAGCCAAACTGCAGATCCTGATGACAGAGTATGGGGTGGCCATGAATGCT
GCTTTTCCACTGTAACCACCATTGTTGGTGATGGGAAGATCAGAGAACACTATGTGAGGATTAACAAATGGCCAAGGATGTTGGTGTCGAGGAATGAAGATTGGAGCTGG
GAGATGTCGAATCACTTCACTTCGTACTCGAGCATAGCTGATGCTGAGAAGGACGGTGGGACAGGGCCACTTTAA
mRNA sequenceShow/hide mRNA sequence
AAATTACTCTACGTTAATCGCCGAGCGTTCATCCTCTTCCAAATTCTTCTCCTTTGATCCTTTCTTTGTCTCTCCAGCTTTGAATTCATGGCGCATAGCGGCTTACTCGG
AGGCGGAATGCGGTGGAAAACAAGGAAGAAAATGCGAGAGAATGTCTCCGATGAACGAGGCCAACAAAATGGAACCCTAAGTGTTCTTCTCCAAGACCCTTTCGAGGTTT
TGGGTTCTGATCTATTAATGGCGATTCTTGGCTACGTTGATTCACGCAGCGTGGCACTTTCTCTTCTTGTCTCTCGATCCTGGTATGGAATTGCTTCCAGCGATTCCCTA
TGGAGTTCTAAGTGTGTGGAACTGTGGCTTGGGAAAGCACATATCCCTAGATTGGCGCAAACCCGAGGTCTTCCAAAGATGGCTGCCTATTCATTATCTGTCATGGATGG
CAATCGGACTCGCATTATGAGGGAGGATTTATGTGACCACGCTTGGCAATTTCACTTCAATAAGGAAGCTCCTGTTTACTGGCGAGATCTTGATCCGTATTGGCAAGGTA
GCCACCTTCTCATGCGCCGTTATTTCCACCCCGATGGGAGCCAAACTGCAGATCCTGATGACAGAGTATGGGGTGGCCATGAATGCTGCTTTTCCACTGTAACCACCATT
GTTGGTGATGGGAAGATCAGAGAACACTATGTGAGGATTAACAAATGGCCAAGGATGTTGGTGTCGAGGAATGAAGATTGGAGCTGGGAGATGTCGAATCACTTCACTTC
GTACTCGAGCATAGCTGATGCTGAGAAGGACGGTGGGACAGGGCCACTTTAA
Protein sequenceShow/hide protein sequence
MAHSGLLGGGMRWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLLMAILGYVDSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAA
YSLSVMDGNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTIVGDGKIREHYVRINKWPRMLVSRNEDWSW
EMSNHFTSYSSIADAEKDGGTGPL