; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg06270 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06270
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionglycine-rich protein 5 isoform X1
Genome locationCarg_Chr06:8184305..8185051
RNA-Seq ExpressionCarg06270
SyntenyCarg06270
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597313.1 hypothetical protein SDJN03_10493, partial [Cucurbita argyrosperma subsp. sororia]1.1e-6792.57Show/hide
Query:  MEKLFVMLFLAVVAAATAARNVPGGEKVQFVDAVEVKAAELPAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
        MEKLFVMLFLAVVAAATAARNVPGGEKVQFVDAVEVKAAELPAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
Subjt:  MEKLFVMLFLAVVAAATAARNVPGGEKVQFVDAVEVKAAELPAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG

Query:  LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVVT-G
        LGGMGGGGGGGGGIGGV           AGHGLGGAGGIGGI GHGLGGGGGIG IPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAG VT G
Subjt:  LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVVT-G

Query:  GS
        GS
Subjt:  GS

KAG7028780.1 hypothetical protein SDJN02_09961, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-80100Show/hide
Query:  MEKLFVMLFLAVVAAATAARNVPGGEKVQFVDAVEVKAAELPAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
        MEKLFVMLFLAVVAAATAARNVPGGEKVQFVDAVEVKAAELPAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
Subjt:  MEKLFVMLFLAVVAAATAARNVPGGEKVQFVDAVEVKAAELPAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG

Query:  LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVVTGG
        LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVVTGG
Subjt:  LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVVTGG

Query:  SVRP
        SVRP
Subjt:  SVRP

XP_022945139.1 glycine-rich protein 5 isoform X1 [Cucurbita moschata]1.1e-7597.56Show/hide
Query:  MEKLFVMLFLAVVAAATAARNVPGGEKVQFVDAVEVKAAELPAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
        MEKLFVMLFLAVVAAATAARNVPG EKVQFVDAV+VKAAEL AAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
Subjt:  MEKLFVMLFLAVVAAATAARNVPGGEKVQFVDAVEVKAAELPAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG

Query:  LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVV-TG
        LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVV  G
Subjt:  LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVV-TG

Query:  GSVRP
        GSVRP
Subjt:  GSVRP

XP_022945148.1 glycine-rich cell wall structural protein 1 isoform X2 [Cucurbita moschata]1.5e-6992.68Show/hide
Query:  MEKLFVMLFLAVVAAATAARNVPGGEKVQFVDAVEVKAAELPAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
        MEKLFVMLFLAVVAAATAARNVPG EKVQFVDAV+VKAAEL AAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
Subjt:  MEKLFVMLFLAVVAAATAARNVPGGEKVQFVDAVEVKAAELPAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG

Query:  LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVV-TG
        LGGMGGGGGG          GGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVV  G
Subjt:  LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVV-TG

Query:  GSVRP
        GSVRP
Subjt:  GSVRP

XP_022974868.1 glycine-rich cell wall structural protein [Cucurbita maxima]4.2e-6489.47Show/hide
Query:  MEKLFVMLFLAVVAAATAARNVPGGEKVQFVDAVEVKAAELPAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
        MEKLFVMLFLAVVA   AARNVPG E+VQFVDAVEVKAAELP AGG A RDEK FIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
Subjt:  MEKLFVMLFLAVVAAATAARNVPGGEKVQFVDAVEVKAAELPAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG

Query:  LGGMGGGGGGGGGIGGVAGH---GGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGG-GGDGGA-G
        LGGMGGGGGGGGG+GGVAGH   G GGIGGLAGHGLGGAGGIGGI GHG+GG GGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGG GGDGGA G
Subjt:  LGGMGGGGGGGGGIGGVAGH---GGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGG-GGDGGA-G

Query:  VVTGGSVRP
        +  GGSVRP
Subjt:  VVTGGSVRP

TrEMBL top hitse value%identityAlignment
A0A5D3CZJ9 Putative PE-PGRS family protein PE_PGRS461.3e-2963.29Show/hide
Query:  MEKLFVMLFLAVVAAATAARNVPGGEKVQFVDAVEVKAAELP--AAGGDAGRDEKTFIYGGVGGFAGMGGYAGL-GMPMLGGSAGIGKFGGIGGFAGIGD
        MEKLFV+  L  +A   AAR VPGG++ +FV+AVEVKAAELP  A  GD  RDEK FIYGGVGGFAGMGGYAGL G PMLGGSAGIGKFGGIGG AGIG 
Subjt:  MEKLFVMLFLAVVAAATAARNVPGGEKVQFVDAVEVKAAELP--AAGGDAGRDEKTFIYGGVGGFAGMGGYAGL-GMPMLGGSAGIGKFGGIGGFAGIGD

Query:  PGGLGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVV
         G  GG+GGG G G         G  GIGGLAGHGLGGAGGIGG+ GHGLGG GGIG   G G+GG GG          NGG GG GG+GGG        
Subjt:  PGGLGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVV

Query:  TGGSVRP
          GS+RP
Subjt:  TGGSVRP

A0A6J1D0S3 glycine-rich cell wall structural protein7.4e-3067.29Show/hide
Query:  MEKLFVMLFLAVVAA-ATAARNVPGGEKVQFVDAVEVKAAELPAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLG-MPMLGGSAGIGKFGGIGGFAGIGDP
        M KL VML LA VAA ATAAR VPGG +++ VDAVEVKAAELPA  GDA RD+K F+YGGVGGFAGMGGYAG+G MP LGG  GIGKFGGIGG AG G  
Subjt:  MEKLFVMLFLAVVAA-ATAARNVPGGEKVQFVDAVEVKAAELPAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLG-MPMLGGSAGIGKFGGIGGFAGIGDP

Query:  G--GLGGMGGGGG--GGGGIGGVAGHG--------GGGIGGLAGHGLGG-AG-GIGGIVGHGLGGGGGIGGIPGHGLGGAGGVG-GSGGGDSGNGGTGGI
        G  GLGG GGG G  GGGG+GG+ G G        GGGIGGLAGHGLGG AG G+GG+ GHGLGG GGIGG+ GHGLGG  G G G  GG  GN   GG+
Subjt:  G--GLGGMGGGGG--GGGGIGGVAGHG--------GGGIGGLAGHGLGG-AG-GIGGIVGHGLGGGGGIGGIPGHGLGGAGGVG-GSGGGDSGNGGTGGI

Query:  GGSGGGGDGGAGVV
        GG  GG  GG G V
Subjt:  GGSGGGGDGGAGVV

A0A6J1G005 glycine-rich cell wall structural protein 1 isoform X27.3e-7092.68Show/hide
Query:  MEKLFVMLFLAVVAAATAARNVPGGEKVQFVDAVEVKAAELPAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
        MEKLFVMLFLAVVAAATAARNVPG EKVQFVDAV+VKAAEL AAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
Subjt:  MEKLFVMLFLAVVAAATAARNVPGGEKVQFVDAVEVKAAELPAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG

Query:  LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVV-TG
        LGGMGGGGGG          GGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVV  G
Subjt:  LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVV-TG

Query:  GSVRP
        GSVRP
Subjt:  GSVRP

A0A6J1G053 glycine-rich protein 5 isoform X15.2e-7697.56Show/hide
Query:  MEKLFVMLFLAVVAAATAARNVPGGEKVQFVDAVEVKAAELPAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
        MEKLFVMLFLAVVAAATAARNVPG EKVQFVDAV+VKAAEL AAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
Subjt:  MEKLFVMLFLAVVAAATAARNVPGGEKVQFVDAVEVKAAELPAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG

Query:  LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVV-TG
        LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVV  G
Subjt:  LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVV-TG

Query:  GSVRP
        GSVRP
Subjt:  GSVRP

A0A6J1IHK9 glycine-rich cell wall structural protein2.0e-6489.47Show/hide
Query:  MEKLFVMLFLAVVAAATAARNVPGGEKVQFVDAVEVKAAELPAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
        MEKLFVMLFLAVVA   AARNVPG E+VQFVDAVEVKAAELP AGG A RDEK FIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
Subjt:  MEKLFVMLFLAVVAAATAARNVPGGEKVQFVDAVEVKAAELPAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG

Query:  LGGMGGGGGGGGGIGGVAGH---GGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGG-GGDGGA-G
        LGGMGGGGGGGGG+GGVAGH   G GGIGGLAGHGLGGAGGIGGI GHG+GG GGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGG GGDGGA G
Subjt:  LGGMGGGGGGGGGIGGVAGH---GGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGG-GGDGGA-G

Query:  VVTGGSVRP
        +  GGSVRP
Subjt:  VVTGGSVRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04660.1 glycine-rich protein4.6e-0848.85Show/hide
Query:  VMLFLAVVAAATAARNVPG--------GEKVQFVDAVEVKAAEL--PAAGGDAGRDEKTFIYG--GVGGFAGMGGYA---GLGMPMLGGSAGIGKFGGIG
        V + LA+      AR VPG        G        +  KAA+   P + GD     K  I G  GVGGFAG+GG A   GLGMP++GG  GIGK+GGIG
Subjt:  VMLFLAVVAAATAARNVPG--------GEKVQFVDAVEVKAAEL--PAAGGDAGRDEKTFIYG--GVGGFAGMGGYA---GLGMPMLGGSAGIGKFGGIG

Query:  GFAGIGDPGGLGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGH--GLGGAGGVGGSGGGDSGNGGTGGIGGSG-
        G AGIG    +GG+GG GG GGG+GG+     GG+GG    G+GG GG+GG+ G GLGG GG+GG  G   G+GG GG+GG+GGG  G GG G  GG G 
Subjt:  GFAGIGDPGGLGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGH--GLGGAGGVGGSGGGDSGNGGTGGIGGSG-

Query:  GGGDGGAGVVTGGSVRP
        GGG GG   V GG + P
Subjt:  GGGDGGAGVVTGGSVRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGCTCTTTGTAATGCTCTTCCTGGCTGTTGTTGCGGCGGCTACGGCGGCGCGTAATGTTCCCGGTGGTGAGAAGGTGCAGTTCGTGGACGCCGTTGAAGTCAA
GGCGGCGGAGTTGCCGGCGGCGGGTGGTGATGCTGGTCGTGATGAGAAGACTTTTATCTACGGCGGAGTTGGTGGATTTGCTGGCATGGGCGGGTATGCAGGGTTGGGTA
TGCCGATGCTGGGTGGGTCTGCTGGGATTGGAAAATTTGGTGGAATTGGAGGTTTCGCCGGAATTGGTGACCCGGGTGGCCTCGGCGGTATGGGCGGCGGAGGAGGAGGT
GGTGGTGGAATAGGTGGTGTGGCTGGGCATGGAGGTGGCGGAATAGGTGGTCTAGCTGGGCATGGACTTGGTGGAGCTGGCGGAATAGGTGGTATAGTTGGGCATGGACT
TGGCGGAGGTGGCGGAATTGGTGGTATACCTGGACATGGACTTGGAGGAGCTGGTGGGGTCGGAGGATCCGGCGGCGGTGACAGTGGAAATGGTGGAACTGGCGGGATCG
GAGGATCAGGCGGTGGTGGAGACGGCGGAGCAGGCGTCGTTACCGGTGGCTCTGTTCGACCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGCTCTTTGTAATGCTCTTCCTGGCTGTTGTTGCGGCGGCTACGGCGGCGCGTAATGTTCCCGGTGGTGAGAAGGTGCAGTTCGTGGACGCCGTTGAAGTCAA
GGCGGCGGAGTTGCCGGCGGCGGGTGGTGATGCTGGTCGTGATGAGAAGACTTTTATCTACGGCGGAGTTGGTGGATTTGCTGGCATGGGCGGGTATGCAGGGTTGGGTA
TGCCGATGCTGGGTGGGTCTGCTGGGATTGGAAAATTTGGTGGAATTGGAGGTTTCGCCGGAATTGGTGACCCGGGTGGCCTCGGCGGTATGGGCGGCGGAGGAGGAGGT
GGTGGTGGAATAGGTGGTGTGGCTGGGCATGGAGGTGGCGGAATAGGTGGTCTAGCTGGGCATGGACTTGGTGGAGCTGGCGGAATAGGTGGTATAGTTGGGCATGGACT
TGGCGGAGGTGGCGGAATTGGTGGTATACCTGGACATGGACTTGGAGGAGCTGGTGGGGTCGGAGGATCCGGCGGCGGTGACAGTGGAAATGGTGGAACTGGCGGGATCG
GAGGATCAGGCGGTGGTGGAGACGGCGGAGCAGGCGTCGTTACCGGTGGCTCTGTTCGACCATAA
Protein sequenceShow/hide protein sequence
MEKLFVMLFLAVVAAATAARNVPGGEKVQFVDAVEVKAAELPAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGGLGGMGGGGGG
GGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVVTGGSVRP