; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg06291 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06291
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHomeodomain-like superfamily protein
Genome locationCarg_Chr06:8032374..8034461
RNA-Seq ExpressionCarg06291
SyntenyCarg06291
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain
IPR044848 - PHR1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AXF54233.1 MYB10 [Cucurbita pepo]5.8e-5191.15Show/hide
Query:  MLSGFSQEPAGMYSAISALPID-AGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH
        MLSGFSQEPAGMYSAI ALP+D  GG GKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGG DKATPKTIMRTMGVKGLTLYHLKSH
Subjt:  MLSGFSQEPAGMYSAISALPID-AGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH

Query:  LQVCSYRRNTEQA
        LQVCSYR  T++A
Subjt:  LQVCSYRRNTEQA

KAG7028759.1 Protein PHR1-LIKE 2 [Cucurbita argyrosperma subsp. argyrosperma]6.8e-68100Show/hide
Query:  MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL
        MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL
Subjt:  MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL

Query:  QVCSYRRNTEQARYLTFLFRSFVRACVQI
        QVCSYRRNTEQARYLTFLFRSFVRACVQI
Subjt:  QVCSYRRNTEQARYLTFLFRSFVRACVQI

XP_022957549.1 protein PHR1-LIKE 2-like [Cucurbita moschata]1.2e-5188.14Show/hide
Query:  MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL
        MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL
Subjt:  MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL

Query:  QVC-----SYRRNTEQAR
        Q       S++ +TE ++
Subjt:  QVC-----SYRRNTEQAR

XP_022974989.1 protein PHR1-LIKE 2-like [Cucurbita maxima]1.2e-5188.14Show/hide
Query:  MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL
        MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL
Subjt:  MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL

Query:  QVC-----SYRRNTEQAR
        Q       S++ +TE ++
Subjt:  QVC-----SYRRNTEQAR

XP_023539057.1 protein PHR1-LIKE 2-like [Cucurbita pepo subsp. pepo]1.2e-5188.14Show/hide
Query:  MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL
        MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL
Subjt:  MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL

Query:  QVC-----SYRRNTEQAR
        Q       S++ +TE ++
Subjt:  QVC-----SYRRNTEQAR

TrEMBL top hitse value%identityAlignment
A0A1S3AWT2 myb family transcription factor APL isoform X23.8e-4884.75Show/hide
Query:  MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL
        MLSGFSQEPAGMYSAI ALP+D GG GKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL
Subjt:  MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL

Query:  QVC-----SYRRNTEQAR
        Q       S++ +TE ++
Subjt:  QVC-----SYRRNTEQAR

A0A1S3AWU1 myb family transcription factor APL isoform X13.8e-4884.75Show/hide
Query:  MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL
        MLSGFSQEPAGMYSAI ALP+D GG GKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL
Subjt:  MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL

Query:  QVC-----SYRRNTEQAR
        Q       S++ +TE ++
Subjt:  QVC-----SYRRNTEQAR

A0A345BTH6 MYB102.8e-5191.15Show/hide
Query:  MLSGFSQEPAGMYSAISALPID-AGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH
        MLSGFSQEPAGMYSAI ALP+D  GG GKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGG DKATPKTIMRTMGVKGLTLYHLKSH
Subjt:  MLSGFSQEPAGMYSAISALPID-AGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSH

Query:  LQVCSYRRNTEQA
        LQVCSYR  T++A
Subjt:  LQVCSYRRNTEQA

A0A6J1H296 protein PHR1-LIKE 2-like5.6e-5288.14Show/hide
Query:  MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL
        MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL
Subjt:  MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL

Query:  QVC-----SYRRNTEQAR
        Q       S++ +TE ++
Subjt:  QVC-----SYRRNTEQAR

A0A6J1IJ50 protein PHR1-LIKE 2-like5.6e-5288.14Show/hide
Query:  MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL
        MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL
Subjt:  MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHL

Query:  QVC-----SYRRNTEQAR
        Q       S++ +TE ++
Subjt:  QVC-----SYRRNTEQAR

SwissProt top hitse value%identityAlignment
E5L8F7 Myb family transcription factor IPN21.6e-2791.94Show/hide
Query:  GDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ
        GD+ LVLT+DPKPRLRWT ELHERFVDAVTQLGGPDKATPKTIMR MGVKGLTLYHLKSHLQ
Subjt:  GDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ

Q8LAJ7 Protein PHR1-LIKE 32.7e-3583.52Show/hide
Query:  MYSAI-SALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ
        MYSAI S+LP+D G  G +    DGTNLP DACLVLT+DPKPRLRWT+ELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ
Subjt:  MYSAI-SALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ

Q8VYI2 Myb family transcription factor PHL122.5e-2591.38Show/hide
Query:  LVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ
        LVLT+DPKPRLRWT ELHERFVDAVT LGGP+KATPKTIMR MGVKGLTLYHLKSHLQ
Subjt:  LVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ

Q94A57 Protein PHR1-LIKE 23.7e-4086.96Show/hide
Query:  MYSAISALPIDAGGH--GKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ
        MYSAI +LP+D GGH  G + G LDGTNLPGDACLVLT+DPKPRLRWT ELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ
Subjt:  MYSAISALPIDAGGH--GKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ

Q9SAK5 Myb family transcription factor APL1.6e-2773.17Show/hide
Query:  HGKFQGSLDGTN------LPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ
        H K   S++G+       + GD+ LVLT+DPKPRLRWT ELHERFVDAV QLGGPDKATPKTIMR MGVKGLTLYHLKSHLQ
Subjt:  HGKFQGSLDGTN------LPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ

Arabidopsis top hitse value%identityAlignment
AT1G79430.2 Homeodomain-like superfamily protein1.1e-2873.17Show/hide
Query:  HGKFQGSLDGTN------LPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ
        H K   S++G+       + GD+ LVLT+DPKPRLRWT ELHERFVDAV QLGGPDKATPKTIMR MGVKGLTLYHLKSHLQ
Subjt:  HGKFQGSLDGTN------LPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ

AT3G24120.1 Homeodomain-like superfamily protein2.6e-4186.96Show/hide
Query:  MYSAISALPIDAGGH--GKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ
        MYSAI +LP+D GGH  G + G LDGTNLPGDACLVLT+DPKPRLRWT ELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ
Subjt:  MYSAISALPIDAGGH--GKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ

AT3G24120.2 Homeodomain-like superfamily protein2.6e-4186.96Show/hide
Query:  MYSAISALPIDAGGH--GKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ
        MYSAI +LP+D GGH  G + G LDGTNLPGDACLVLT+DPKPRLRWT ELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ
Subjt:  MYSAISALPIDAGGH--GKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ

AT4G13640.1 Homeodomain-like superfamily protein1.9e-3683.52Show/hide
Query:  MYSAI-SALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ
        MYSAI S+LP+D G  G +    DGTNLP DACLVLT+DPKPRLRWT+ELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ
Subjt:  MYSAI-SALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ

AT4G13640.2 Homeodomain-like superfamily protein1.9e-3683.52Show/hide
Query:  MYSAI-SALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ
        MYSAI S+LP+D G  G +    DGTNLP DACLVLT+DPKPRLRWT+ELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ
Subjt:  MYSAI-SALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTCTGGGTTTTCTCAGGAACCGGCCGGAATGTACTCGGCCATTTCGGCGCTGCCGATTGACGCCGGCGGTCACGGCAAGTTTCAGGGTTCTCTTGACGGAACGAA
TCTTCCCGGCGATGCTTGTTTGGTTCTCACGTCGGATCCGAAGCCGCGCCTCCGCTGGACGGCGGAGCTTCATGAGCGATTTGTCGACGCCGTCACTCAGCTCGGCGGCC
CTGACAAGGCAACCCCGAAAACAATTATGAGAACAATGGGAGTAAAAGGTCTCACGCTTTATCACTTAAAATCGCACCTCCAGGTTTGTTCATATCGCCGTAATACCGAA
CAAGCTCGATACTTAACCTTTTTGTTCCGTTCGTTCGTGCGTGCGTGTGTGCAAATTTGA
mRNA sequenceShow/hide mRNA sequence
TCATTTTCGTTTTGATTTTATAATCTCCCACTCGCCGGAGCCAAAATGCTCTCTGGGTTTTCTCAGGAACCGGCCGGAATGTACTCGGCCATTTCGGCGCTGCCGATTGA
CGCCGGCGGTCACGGCAAGTTTCAGGGTTCTCTTGACGGAACGAATCTTCCCGGCGATGCTTGTTTGGTTCTCACGTCGGATCCGAAGCCGCGCCTCCGCTGGACGGCGG
AGCTTCATGAGCGATTTGTCGACGCCGTCACTCAGCTCGGCGGCCCTGACAAGGCAACCCCGAAAACAATTATGAGAACAATGGGAGTAAAAGGTCTCACGCTTTATCAC
TTAAAATCGCACCTCCAGGTTTGTTCATATCGCCGTAATACCGAACAAGCTCGATACTTAACCTTTTTGTTCCGTTCGTTCGTGCGTGCGTGTGTGCAAATTTGA
Protein sequenceShow/hide protein sequence
MLSGFSQEPAGMYSAISALPIDAGGHGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQVCSYRRNTE
QARYLTFLFRSFVRACVQI