; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg06301 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06301
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRING-type domain-containing protein
Genome locationCarg_Chr06:7938715..7942971
RNA-Seq ExpressionCarg06301
SyntenyCarg06301
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597278.1 E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia]1.4e-11399.51Show/hide
Query:  MDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTDRNNV
        MDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISP KFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTDRNNV
Subjt:  MDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTDRNNV

Query:  SIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIR
        SIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIR
Subjt:  SIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIR

Query:  IYLPF
        IYLPF
Subjt:  IYLPF

KAG7028749.1 hypothetical protein SDJN02_09930, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-166100Show/hide
Query:  MEWKPRLLLYRLPPPPPPPPPPPPPFPVSFCSPILLPLLRFCKFLAVPRSILPLLPLFAVPSSARKAVGMSFQSRNDLQEWSARVVERGTVMDFDLNCPP
        MEWKPRLLLYRLPPPPPPPPPPPPPFPVSFCSPILLPLLRFCKFLAVPRSILPLLPLFAVPSSARKAVGMSFQSRNDLQEWSARVVERGTVMDFDLNCPP
Subjt:  MEWKPRLLLYRLPPPPPPPPPPPPPFPVSFCSPILLPLLRFCKFLAVPRSILPLLPLFAVPSSARKAVGMSFQSRNDLQEWSARVVERGTVMDFDLNCPP

Query:  PDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTDRNNVSIQEQTIHN
        PDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTDRNNVSIQEQTIHN
Subjt:  PDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTDRNNVSIQEQTIHN

Query:  LDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF
        LDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF
Subjt:  LDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF

XP_022935007.1 uncharacterized protein LOC111441975 [Cucurbita moschata]1.3e-127100Show/hide
Query:  MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGA
        MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGA
Subjt:  MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGA

Query:  FSDLTSLAPFTIWPPLTDRNNVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIET
        FSDLTSLAPFTIWPPLTDRNNVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIET
Subjt:  FSDLTSLAPFTIWPPLTDRNNVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIET

Query:  AIATQHRCPICRRKLRKRDIIRIYLPF
        AIATQHRCPICRRKLRKRDIIRIYLPF
Subjt:  AIATQHRCPICRRKLRKRDIIRIYLPF

XP_022974776.1 E3 ubiquitin-protein ligase BRE1-like [Cucurbita maxima]1.0e-12296.92Show/hide
Query:  MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGA
        MSFQSRNDLQEWSARVVERGTVMDFDLN PPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGA
Subjt:  MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGA

Query:  FSDLTSLAPFTIWPPLTDRNNVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIET
        FSDL+SLAPFTIWP LT RNNVSIQEQTIHNLDLCLSCESSSKATKATIDT IPSALAQTSSSLPPAA+SGLRCAIC+EALVEETTTKCGHVFCKSCIET
Subjt:  FSDLTSLAPFTIWPPLTDRNNVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIET

Query:  AIATQHRCPICRRKLRKRDIIRIYLPF
        AIATQHRCPICRRKLRKRDIIRIYLPF
Subjt:  AIATQHRCPICRRKLRKRDIIRIYLPF

XP_023540616.1 uncharacterized protein LOC111800927 [Cucurbita pepo subsp. pepo]2.4e-12999.57Show/hide
Query:  KAVGMSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIR
        KAVGMSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIR
Subjt:  KAVGMSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIR

Query:  RNGAFSDLTSLAPFTIWPPLTDRNNVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKS
        RNGAFSDLTSLAPFTIWPPLT+RNNVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKS
Subjt:  RNGAFSDLTSLAPFTIWPPLTDRNNVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKS

Query:  CIETAIATQHRCPICRRKLRKRDIIRIYLPF
        CIETAIATQHRCPICRRKLRKRDIIRIYLPF
Subjt:  CIETAIATQHRCPICRRKLRKRDIIRIYLPF

TrEMBL top hitse value%identityAlignment
A0A1S3AW86 uncharacterized protein LOC1034834702.3e-9377.78Show/hide
Query:  MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRN--
        MS QS NDL +WSARV+ER TV+DFDLNCPPPDECIDPTGP  EA QYYNHYQGQA D    +DEDIAIISPRKFAEARKNFRRNHFES  G  IRRN  
Subjt:  MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRN--

Query:  ----GAFSDLTSLAPFTIWPPLTDRNNVSIQE-QTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVF
            GA SD+T+  PFTIW PLT  NNVS+QE QTIHNLDL LSCESSS+ATKA  DTDIPS LA  SSS+PP   + LRCAICIE LVEETTTKCGHVF
Subjt:  ----GAFSDLTSLAPFTIWPPLTDRNNVSIQE-QTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVF

Query:  CKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF
        C++CIETAIATQHRCPICRRKLRKRDIIRIYLPF
Subjt:  CKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF

A0A5A7U158 E3 ubiquitin-protein ligase RNF4-like2.3e-9377.78Show/hide
Query:  MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRN--
        MS QS NDL +WSARV+ER TV+DFDLNCPPPDECIDPTGP  EA QYYNHYQGQA D    +DEDIAIISPRKFAEARKNFRRNHFES  G  IRRN  
Subjt:  MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRN--

Query:  ----GAFSDLTSLAPFTIWPPLTDRNNVSIQE-QTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVF
            GA SD+T+  PFTIW PLT  NNVS+QE QTIHNLDL LSCESSS+ATKA  DTDIPS LA  SSS+PP   + LRCAICIE LVEETTTKCGHVF
Subjt:  ----GAFSDLTSLAPFTIWPPLTDRNNVSIQE-QTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVF

Query:  CKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF
        C++CIETAIATQHRCPICRRKLRKRDIIRIYLPF
Subjt:  CKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF

A0A6J1D1D9 E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like2.0e-10079.83Show/hide
Query:  MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRN--
        MS Q RNDL EW+ARVVER TVMDFDLNCPPPDECI+PTGP +EA Q++NH+Q QA DNP+ VDEDIAIISPRKFAEARKNFRRNHF+SSCGVA+R N  
Subjt:  MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRN--

Query:  ----GAFSDLTSLAPFTIWPPLTDRNNVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFC
            GA SD+TS  PFTIWPPLT  NNVSI+EQTIHNLDLCLS ESSS+A     DTDIPSALAQ+SS +PPAA S LRCAICIE LVEETTTKCGHVFC
Subjt:  ----GAFSDLTSLAPFTIWPPLTDRNNVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFC

Query:  KSCIETAIATQHRCPICRRKLRKRDIIRIYLPF
        ++CIETAIATQHRCPICRRKLRKRDIIRIYLPF
Subjt:  KSCIETAIATQHRCPICRRKLRKRDIIRIYLPF

A0A6J1F4D6 uncharacterized protein LOC1114419756.5e-128100Show/hide
Query:  MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGA
        MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGA
Subjt:  MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGA

Query:  FSDLTSLAPFTIWPPLTDRNNVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIET
        FSDLTSLAPFTIWPPLTDRNNVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIET
Subjt:  FSDLTSLAPFTIWPPLTDRNNVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIET

Query:  AIATQHRCPICRRKLRKRDIIRIYLPF
        AIATQHRCPICRRKLRKRDIIRIYLPF
Subjt:  AIATQHRCPICRRKLRKRDIIRIYLPF

A0A6J1ICB2 E3 ubiquitin-protein ligase BRE1-like4.8e-12396.92Show/hide
Query:  MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGA
        MSFQSRNDLQEWSARVVERGTVMDFDLN PPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGA
Subjt:  MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGA

Query:  FSDLTSLAPFTIWPPLTDRNNVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIET
        FSDL+SLAPFTIWP LT RNNVSIQEQTIHNLDLCLSCESSSKATKATIDT IPSALAQTSSSLPPAA+SGLRCAIC+EALVEETTTKCGHVFCKSCIET
Subjt:  FSDLTSLAPFTIWPPLTDRNNVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIET

Query:  AIATQHRCPICRRKLRKRDIIRIYLPF
        AIATQHRCPICRRKLRKRDIIRIYLPF
Subjt:  AIATQHRCPICRRKLRKRDIIRIYLPF

SwissProt top hitse value%identityAlignment
D3YY23 LON peptidase N-terminal domain and RING finger protein 18.8e-0537.5Show/hide
Query:  SGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRK
        S   C++C+    E  TT CGH FCK+C+E  +     CP+C+  L++
Subjt:  SGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRK

P87176 E3 ubiquitin-protein ligase complex slx8-rfp subunit slx85.1e-0528.68Show/hide
Query:  PFTIWPPLTDRNNVSIQEQTIHNLDLCLSCESS-------------SKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCK
        P ++   LT+ N++  Q  TI ++ + L+ E+S                T A I+ + PS      SS      +  +C IC+++    + T CGH+FC 
Subjt:  PFTIWPPLTDRNNVSIQEQTIHNLDLCLSCESS-------------SKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCK

Query:  SCIETAIAT---QHRCPICRRKLRKRDII
         CI +A+ T     +CP+CRRK+    +I
Subjt:  SCIETAIAT---QHRCPICRRKLRKRDII

Q17RB8 LON peptidase N-terminal domain and RING finger protein 18.8e-0537.5Show/hide
Query:  SGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRK
        S   C++C+    E  TT CGH FCK+C+E  +     CP+C+  L++
Subjt:  SGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRK

Q96EQ8 E3 ubiquitin-protein ligase RNF1255.1e-0542.31Show/hide
Query:  PPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIA-TQHRCPICRRKL
        P    +   CA+C+E L +   T+CGHVFC+SCI T++   +  CP CR  L
Subjt:  PPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIA-TQHRCPICRRKL

Q9D9R0 E3 ubiquitin-protein ligase RNF1253.0e-0536.36Show/hide
Query:  SSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHR--CPICRRKL
        SS ++K+   +  P  L ++  S  P   +   C++C+E L +   T+CGHVFC+SCI T+I   ++  CP CR  L
Subjt:  SSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHR--CPICRRKL

Arabidopsis top hitse value%identityAlignment
AT3G07200.1 RING/U-box superfamily protein2.6e-1234.52Show/hide
Query:  KATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLP
        ++ + ++D+   +   ++ +  PP       C IC+    +E +TKCGH+FCK CI+ A++ Q +CP CR+K+  +D+IR++LP
Subjt:  KATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLP

AT3G07200.2 RING/U-box superfamily protein2.6e-1234.52Show/hide
Query:  KATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLP
        ++ + ++D+   +   ++ +  PP       C IC+    +E +TKCGH+FCK CI+ A++ Q +CP CR+K+  +D+IR++LP
Subjt:  KATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLP

AT5G48655.1 RING/U-box superfamily protein4.3e-1527.36Show/hide
Query:  DLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTDRNNVSIQ
        DLN  P D+                      M + + +++D+   S   FAEA+   R            RR     D+ S    T +P      N+S +
Subjt:  DLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTDRNNVSIQ

Query:  EQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYL
         + I + +  + CE +S       + ++ S ++++ +  PP       C IC+    EE +TKCGH+FCK CI+ AI+ Q +CP CR+K+  +++IR++L
Subjt:  EQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYL

Query:  P
        P
Subjt:  P

AT5G48655.2 RING/U-box superfamily protein4.3e-1527.36Show/hide
Query:  DLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTDRNNVSIQ
        DLN  P D+                      M + + +++D+   S   FAEA+   R            RR     D+ S    T +P      N+S +
Subjt:  DLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTDRNNVSIQ

Query:  EQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYL
         + I + +  + CE +S       + ++ S ++++ +  PP       C IC+    EE +TKCGH+FCK CI+ AI+ Q +CP CR+K+  +++IR++L
Subjt:  EQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYL

Query:  P
        P
Subjt:  P

AT5G48655.3 RING/U-box superfamily protein4.3e-1527.36Show/hide
Query:  DLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTDRNNVSIQ
        DLN  P D+                      M + + +++D+   S   FAEA+   R            RR     D+ S    T +P      N+S +
Subjt:  DLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTDRNNVSIQ

Query:  EQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYL
         + I + +  + CE +S       + ++ S ++++ +  PP       C IC+    EE +TKCGH+FCK CI+ AI+ Q +CP CR+K+  +++IR++L
Subjt:  EQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYL

Query:  P
        P
Subjt:  P


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATGGAAACCAAGATTGCTTTTATATCGATTGCCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCTTTCCCGTCTCTTTTTGCTCTCCGATTCTTCTTCC
TCTGCTTCGCTTCTGCAAGTTTCTTGCGGTTCCTCGTTCGATCCTCCCTCTCCTGCCGCTGTTCGCCGTTCCGTCTTCCGCCAGAAAGGCTGTTGGAATGAGCTTTCAAA
GTAGAAATGATCTACAGGAATGGAGTGCAAGAGTTGTTGAGCGAGGAACAGTAATGGACTTCGACCTAAATTGCCCACCTCCAGATGAGTGCATTGATCCAACTGGTCCT
CATCAGGAAGCAACACAGTACTACAATCATTACCAAGGACAAGCTATGGACAATCCCGAGTTTGTTGACGAGGACATTGCTATAATCTCCCCTAGGAAATTTGCTGAGGC
CAGGAAGAACTTTCGACGAAACCACTTTGAGAGTAGCTGTGGTGTTGCCATTAGACGTAATGGTGCCTTCTCAGATTTAACGAGTTTGGCCCCTTTTACAATTTGGCCGC
CCCTTACAGACCGCAATAACGTATCTATACAAGAACAAACGATTCACAACTTGGACCTTTGCTTAAGCTGCGAAAGCAGTAGTAAAGCCACAAAGGCAACAATTGACACA
GACATCCCTTCTGCACTTGCACAAACTAGCAGCAGCCTCCCACCTGCAGCAGCCTCGGGTTTGCGGTGCGCGATCTGCATAGAAGCATTGGTTGAAGAAACAACAACCAA
ATGCGGGCACGTTTTCTGCAAGAGTTGCATCGAAACAGCCATCGCTACCCAGCACAGATGTCCTATATGTCGGCGTAAGCTTCGAAAACGAGATATTATCCGAATTTATC
TACCGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATGGAAACCAAGATTGCTTTTATATCGATTGCCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCTTTCCCGTCTCTTTTTGCTCTCCGATTCTTCTTCC
TCTGCTTCGCTTCTGCAAGTTTCTTGCGGTTCCTCGTTCGATCCTCCCTCTCCTGCCGCTGTTCGCCGTTCCGTCTTCCGCCAGAAAGGCTGTTGGAATGAGCTTTCAAA
GTAGAAATGATCTACAGGAATGGAGTGCAAGAGTTGTTGAGCGAGGAACAGTAATGGACTTCGACCTAAATTGCCCACCTCCAGATGAGTGCATTGATCCAACTGGTCCT
CATCAGGAAGCAACACAGTACTACAATCATTACCAAGGACAAGCTATGGACAATCCCGAGTTTGTTGACGAGGACATTGCTATAATCTCCCCTAGGAAATTTGCTGAGGC
CAGGAAGAACTTTCGACGAAACCACTTTGAGAGTAGCTGTGGTGTTGCCATTAGACGTAATGGTGCCTTCTCAGATTTAACGAGTTTGGCCCCTTTTACAATTTGGCCGC
CCCTTACAGACCGCAATAACGTATCTATACAAGAACAAACGATTCACAACTTGGACCTTTGCTTAAGCTGCGAAAGCAGTAGTAAAGCCACAAAGGCAACAATTGACACA
GACATCCCTTCTGCACTTGCACAAACTAGCAGCAGCCTCCCACCTGCAGCAGCCTCGGGTTTGCGGTGCGCGATCTGCATAGAAGCATTGGTTGAAGAAACAACAACCAA
ATGCGGGCACGTTTTCTGCAAGAGTTGCATCGAAACAGCCATCGCTACCCAGCACAGATGTCCTATATGTCGGCGTAAGCTTCGAAAACGAGATATTATCCGAATTTATC
TACCGTTTTGAACATGAAAAATATGAATACAAATAAAAGAATATTGCATCTGTATTCTTTTTCTGATGACGAACTAGGCTTGTACTACTTGCACACAGTTGCATTAACAA
CAAGTATAGATTTCTTCATTTCTTTGTTCTTCTTCTTCTTCTTCTTCTTCTTATTCGTCATC
Protein sequenceShow/hide protein sequence
MEWKPRLLLYRLPPPPPPPPPPPPPFPVSFCSPILLPLLRFCKFLAVPRSILPLLPLFAVPSSARKAVGMSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGP
HQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTDRNNVSIQEQTIHNLDLCLSCESSSKATKATIDT
DIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF