; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg06388 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06388
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRING/U-box protein with C6HC-type zinc finger
Genome locationCarg_Chr14:9463109..9464077
RNA-Seq ExpressionCarg06388
SyntenyCarg06388
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0032436 - positive regulation of proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0000151 - ubiquitin ligase complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0031624 - ubiquitin conjugating enzyme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR002867 - IBR domain
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site
IPR027370 - RING-type zinc-finger, LisH dimerisation motif
IPR031127 - E3 ubiquitin ligase RBR family
IPR044066 - TRIAD supradomain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581788.1 putative E3 ubiquitin-protein ligase ARI5, partial [Cucurbita argyrosperma subsp. sororia]8.8e-16199.65Show/hide
Query:  MAVDASSSHGSSLSVDDIYFSVLHEHQSVFPISDEIFAEELQLQESIASSLFTSTIMSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADC
        MAVDASSSHGSSLSVDDIYFSVLHEHQSVFPISDEIFAEELQLQESIASSLFTSTIMS+KPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADC
Subjt:  MAVDASSSHGSSLSVDDIYFSVLHEHQSVFPISDEIFAEELQLQESIASSLFTSTIMSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADC

Query:  ISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDMEAVECPECWRMFCAKCGVGWHGDMN
        ISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDMEAVECPECWRMFCAKCGVGWHGDMN
Subjt:  ISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDMEAVECPECWRMFCAKCGVGWHGDMN

Query:  CTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEGADRNFATAVELSGMATMHVRPQLMNVQSIDVDLHPPVVLN
        CTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEGADRNFATAVELSGMATMHVRPQLMNVQSIDVDLHPPVVLN
Subjt:  CTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEGADRNFATAVELSGMATMHVRPQLMNVQSIDVDLHPPVVLN

KAG7018238.1 putative E3 ubiquitin-protein ligase ARI5, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-161100Show/hide
Query:  MAVDASSSHGSSLSVDDIYFSVLHEHQSVFPISDEIFAEELQLQESIASSLFTSTIMSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADC
        MAVDASSSHGSSLSVDDIYFSVLHEHQSVFPISDEIFAEELQLQESIASSLFTSTIMSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADC
Subjt:  MAVDASSSHGSSLSVDDIYFSVLHEHQSVFPISDEIFAEELQLQESIASSLFTSTIMSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADC

Query:  ISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDMEAVECPECWRMFCAKCGVGWHGDMN
        ISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDMEAVECPECWRMFCAKCGVGWHGDMN
Subjt:  ISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDMEAVECPECWRMFCAKCGVGWHGDMN

Query:  CTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEGADRNFATAVELSGMATMHVRPQLMNVQSIDVDLHPPVVLN
        CTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEGADRNFATAVELSGMATMHVRPQLMNVQSIDVDLHPPVVLN
Subjt:  CTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEGADRNFATAVELSGMATMHVRPQLMNVQSIDVDLHPPVVLN

XP_022956145.1 probable E3 ubiquitin-protein ligase ARI10 [Cucurbita moschata]6.8e-13799.18Show/hide
Query:  MAVDASSSHGSSLSVDDIYFSVLHEHQSVFPISDEIFAEELQLQESIASSLFTSTIMSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADC
        MAVDASSSHGSSLSVDDIYFSVLHEHQSVFPISDEIFAEELQLQESIASSLFTSTIMSNKPSPN ESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADC
Subjt:  MAVDASSSHGSSLSVDDIYFSVLHEHQSVFPISDEIFAEELQLQESIASSLFTSTIMSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADC

Query:  ISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDMEAVECPECWRMFCAKCGVGWHGDMN
        ISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDMEAVECP+CWRMFCAKCGVGWHGDMN
Subjt:  ISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDMEAVECPECWRMFCAKCGVGWHGDMN

Query:  CTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEG
        CTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEG
Subjt:  CTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEG

XP_022980686.1 probable E3 ubiquitin-protein ligase ARI5 [Cucurbita maxima]5.8e-12893.44Show/hide
Query:  MAVDASSSHGSSLSVDDIYFSVLHEHQSVFPISDEIFAEELQLQESIASSLFTSTIMSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADC
        MA ++SS+HGSSLSVDDIY+S LHEHQSVFPISDEIFAEELQLQESIASS FTSTIMSNKPSPN ESSGS TLCTICTDTKSASEMFTSTGCSHTFCADC
Subjt:  MAVDASSSHGSSLSVDDIYFSVLHEHQSVFPISDEIFAEELQLQESIASSLFTSTIMSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADC

Query:  ISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDMEAVECPECWRMFCAKCGVGWHGDMN
        ISKHIAAKL DS+AVKCPEPKCAAVL+PEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEED EAVECP+CWRMFCAKCGVGWH DMN
Subjt:  ISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDMEAVECPECWRMFCAKCGVGWHGDMN

Query:  CTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEG
        CTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKI G
Subjt:  CTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEG

XP_023527456.1 probable E3 ubiquitin-protein ligase rbrA [Cucurbita pepo subsp. pepo]1.9e-10295.21Show/hide
Query:  MSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADCISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWK
        MSNKPSPN ESSGS TLCTICT TKSASEMFTSTGCSHTFCADCISKHIAA+LEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWK
Subjt:  MSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADCISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWK

Query:  MVYCPFKDCSAGMVDEEDMEAVECPECWRMFCAKCGVGWHGDMNCTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEG
        MVYCPFKDC AGMVD+ED EAVECP+CWRMFCAKCGVGWHGDMNCTEFQRLLKNGGVDREE MTMKLADERKWKRCPHCKILVEKIEG
Subjt:  MVYCPFKDCSAGMVDEEDMEAVECPECWRMFCAKCGVGWHGDMNCTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEG

TrEMBL top hitse value%identityAlignment
A0A0A0L952 Uncharacterized protein2.0e-7364.22Show/hide
Query:  ISDEIFAEELQLQESIASSLFTSTIMSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADCISKHIAAKLEDSMAVKCPEPKCAAVLEPEMC
        +SDE +AEELQLQE I SSL +S I    PSP   SS S  LC+ICTD KS S+MFT+  C+HTFC  CIS HIAAKLE +MAVKCPEP C  VLEPEMC
Subjt:  ISDEIFAEELQLQESIASSLFTSTIMSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADCISKHIAAKLEDSMAVKCPEPKCAAVLEPEMC

Query:  DSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVD---EEDMEAVECPECWRMFCAKCGVGWHGDMNCTEFQRLLKNGGV--DREEEMTMKLADE
         SFVPK VLERW DAL +AM+LKWK + CPFKDC A ++D   EE + AVEC  CWR+FCA+C VGWHG+M C EFQRL K  GV  D+++ MT+KLA+ 
Subjt:  DSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVD---EEDMEAVECPECWRMFCAKCGVGWHGDMNCTEFQRLLKNGGV--DREEEMTMKLADE

Query:  RKWKRCPHCKILVEKIEG
        +KW+RCPHCKI VEK  G
Subjt:  RKWKRCPHCKILVEKIEG

A0A5A7UED3 E3 ubiquitin-protein ligase RNF144B-like protein2.6e-7364.84Show/hide
Query:  ISDEIFAEELQLQESIASSLFTSTI-MSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADCISKHIAAKLEDSMAVKCPEPKCAAVLEPEM
        +SDE +AEELQLQE I SSL +  I +   PSP   SS S  LC+ICTD KS S+MFT+  C+HTFC DCISKHIAAKLE +MAVKCPEP C  VLEPEM
Subjt:  ISDEIFAEELQLQESIASSLFTSTI-MSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADCISKHIAAKLEDSMAVKCPEPKCAAVLEPEM

Query:  CDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDME---AVECPECWRMFCAKCGVGWHGDMNCTEFQRLLKNGGV--DREEEMTMKLAD
        C SFVPK VLERW DAL +AM+LK K + CPFKDC A M+DE D E   AVEC  CWR+FCA+C VGWHG+M C EFQRL K  GV  D+++ MT+KLA+
Subjt:  CDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDME---AVECPECWRMFCAKCGVGWHGDMNCTEFQRLLKNGGV--DREEEMTMKLAD

Query:  ERKWKRCPHCKILVEKIEG
         +KW+RCPHCKI VEK  G
Subjt:  ERKWKRCPHCKILVEKIEG

A0A6J1DGR7 E3 ubiquitin-protein ligase RNF144A-like2.5e-8457.89Show/hide
Query:  MAVDASSSHGSSLSVDDIYFSVLHEHQSVFPISDEIFAEELQLQESIASSL---FTSTIMSN------------KPSPNSESSGS-TTLCTICTDTKSAS
        MA +AS   G    VDDIYFS L + ++VFPISDE  AE LQLQE+IASS+    T+ I+ +            K   +S SSGS T+LC ICTDTKSA+
Subjt:  MAVDASSSHGSSLSVDDIYFSVLHEHQSVFPISDEIFAEELQLQESIASSL---FTSTIMSN------------KPSPNSESSGS-TTLCTICTDTKSAS

Query:  EMFTSTGCSHTFCADCISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDE----EDMEAVEC
        EMFTS+ CSH+FCADCISKHIAAKLED++AVKCPEPKC + LEP MCDSFVP+EVLERWGDAL +A++L    +YCPF DCSA M+D+      + A EC
Subjt:  EMFTSTGCSHTFCADCISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDE----EDMEAVEC

Query:  PECWRMFCAKCGVGWHGDMNCTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIE-----------GADRNFATAVELSGMATMHVRPQLMN
        P C RMFCA+C VGWHG+M C EFQ+L K GG  RE+ M ++LA+ +KWKRCPHCKI VEK+            GA+ +FA AVE SG+  MHV  QLMN
Subjt:  PECWRMFCAKCGVGWHGDMNCTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIE-----------GADRNFATAVELSGMATMHVRPQLMN

Query:  VQSI
        V +I
Subjt:  VQSI

A0A6J1GX07 probable E3 ubiquitin-protein ligase ARI103.3e-13799.18Show/hide
Query:  MAVDASSSHGSSLSVDDIYFSVLHEHQSVFPISDEIFAEELQLQESIASSLFTSTIMSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADC
        MAVDASSSHGSSLSVDDIYFSVLHEHQSVFPISDEIFAEELQLQESIASSLFTSTIMSNKPSPN ESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADC
Subjt:  MAVDASSSHGSSLSVDDIYFSVLHEHQSVFPISDEIFAEELQLQESIASSLFTSTIMSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADC

Query:  ISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDMEAVECPECWRMFCAKCGVGWHGDMN
        ISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDMEAVECP+CWRMFCAKCGVGWHGDMN
Subjt:  ISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDMEAVECPECWRMFCAKCGVGWHGDMN

Query:  CTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEG
        CTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEG
Subjt:  CTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEG

A0A6J1IU95 probable E3 ubiquitin-protein ligase ARI52.8e-12893.44Show/hide
Query:  MAVDASSSHGSSLSVDDIYFSVLHEHQSVFPISDEIFAEELQLQESIASSLFTSTIMSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADC
        MA ++SS+HGSSLSVDDIY+S LHEHQSVFPISDEIFAEELQLQESIASS FTSTIMSNKPSPN ESSGS TLCTICTDTKSASEMFTSTGCSHTFCADC
Subjt:  MAVDASSSHGSSLSVDDIYFSVLHEHQSVFPISDEIFAEELQLQESIASSLFTSTIMSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADC

Query:  ISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDMEAVECPECWRMFCAKCGVGWHGDMN
        ISKHIAAKL DS+AVKCPEPKCAAVL+PEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEED EAVECP+CWRMFCAKCGVGWH DMN
Subjt:  ISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDMEAVECPECWRMFCAKCGVGWHGDMN

Query:  CTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEG
        CTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKI G
Subjt:  CTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEG

SwissProt top hitse value%identityAlignment
Q6DH94 Probable E3 ubiquitin-protein ligase RNF144A-B2.7e-1127.42Show/hide
Query:  CTICTDTKSASEMFTSTGCSHTFCADCISKHIAAKLEDSM--AVKCPE---PKCAAVLEPEMCDSFVPKEVLERWGDALL-KAMLLKWKMVYCPFKDCSA
        C +C       +M T + C   FC+ C+ +++   +++ +  A+ CP+   PK   +LE E+ +  V  EV++ +      + +LL     +CP   C A
Subjt:  CTICTDTKSASEMFTSTGCSHTFCADCISKHIAAKLEDSM--AVKCPE---PKCAAVLEPEMCDSFVPKEVLERWGDALL-KAMLLKWKMVYCPFKDCSA

Query:  -GMVDEEDM---EAVECPECWRMFCAKCGVGWHGDMNCTEFQRLL-----KNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEG
           ++E ++   + V+CPEC   FC+ C    H    C E   +      +NG   + +E      DE   KRCP CK+ +E+ EG
Subjt:  -GMVDEEDM---EAVECPECWRMFCAKCGVGWHGDMNCTEFQRLL-----KNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEG

Q9JI90 E3 ubiquitin-protein ligase RNF141.2e-1125.33Show/hide
Query:  SSLFTSTIMSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADCISKHIAAKLEDSM--AVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDA
        SSL    +  N+       +    LC+IC   K  S+      C H +C  C+  +   +++D     + CPEP+C +V  P      V  ++  R+   
Subjt:  SSLFTSTIMSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADCISKHIAAKLEDSM--AVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDA

Query:  LLKAML-LKWKMVYCPFKDCSAGMVDEEDMEAVECPECWRMFCAKCGVGWHGDMNC-----------TEF------------QRLLKNGGVDREEEMTMK
        LL++ L L   +VYCP   C   ++ E       C  C   FC  C + +HG   C            E+            QR  K       EEM  K
Subjt:  LLKAML-LKWKMVYCPFKDCSAGMVDEEDMEAVECPECWRMFCAKCGVGWHGDMNC-----------TEF------------QRLLKNGGVDREEEMTMK

Query:  LADERKWKRCPHCKILVEKIEGADRNFAT
           E+  K CP C   ++K++G ++   T
Subjt:  LADERKWKRCPHCKILVEKIEGADRNFAT

Q9SKC2 Probable E3 ubiquitin-protein ligase ARI117.6e-1428.45Show/hide
Query:  VLHEHQSVFPISDEIFAEELQLQESIASSLFTSTIMSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADCISKHIAAKLEDS---MAVKCP
        +LH H  V  + DE F +E ++++++         +  +P  +   +     C IC ++ +  E+     C H +C  C + +I  K+ED    + VKCP
Subjt:  VLHEHQSVFPISDEIFAEELQLQESIASSLFTSTIMSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADCISKHIAAKLEDS---MAVKCP

Query:  EPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKW-KMVYCPFKDCSAGM---VDEEDMEAVECPECWRMFCAKCGVGWHGDMNC-TEFQRLLKNGGV
        EP C AV+  +M D    K+  +++    L++ +    KM +CP   C   +   V+      V C  C   FC  C    H  ++C T  + LLKN   
Subjt:  EPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKW-KMVYCPFKDCSAGM---VDEEDMEAVECPECWRMFCAKCGVGWHGDMNC-TEFQRLLKNGGV

Query:  DREEEMTMKLADERKWKRCPHCKILVEKIEGADRNFATA
        D  E M   LA   K K CP CK  +EK  G +    +A
Subjt:  DREEEMTMKLADERKWKRCPHCKILVEKIEGADRNFATA

Q9SKC4 Probable E3 ubiquitin-protein ligase ARI101.3e-1326.69Show/hide
Query:  VLHEHQSVFPISDEIFAEELQLQESIASSLFTSTIMSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADCISKHIAAKLEDS---MAVKCP
        +LH H  V  + DE F +E ++++++         +  +P  +   +     C IC ++ +  E+  S  C H +C  C + +I  K+ED    + VKCP
Subjt:  VLHEHQSVFPISDEIFAEELQLQESIASSLFTSTIMSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADCISKHIAAKLEDS---MAVKCP

Query:  EPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKW-KMVYCPFKDCSAGMVDEEDMEAVECPECWRMFCAKCGVGWHGDMNC-TEFQRLLKNGGVDRE
        EP C AV+  +M D    K+  +++    L++ +    KM +CP   C   +   E         C   FC  C    H  ++C T  + + KN   D  
Subjt:  EPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKW-KMVYCPFKDCSAGMVDEEDMEAVECPECWRMFCAKCGVGWHGDMNC-TEFQRLLKNGGVDRE

Query:  EEMTMKLADERKWKRCPHCKILVEKIEGADRNFATA
        E     LA+    K CP CK  +EK  G +    +A
Subjt:  EEMTMKLADERKWKRCPHCKILVEKIEGADRNFATA

Q9UBS8 E3 ubiquitin-protein ligase RNF143.4e-1426.83Show/hide
Query:  LCTICTDTKSASEMFTSTGCSHTFCADCISKHIAAKLEDS--MAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAML-LKWKMVYCPFKDCSAGM
        LC+IC   K  SE      C H +C  C+  +   ++ D     + CPEPKC +V  P      V  E+  R+   LL++ L L   +VYCP   C   +
Subjt:  LCTICTDTKSASEMFTSTGCSHTFCADCISKHIAAKLEDS--MAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAML-LKWKMVYCPFKDCSAGM

Query:  VDEEDMEAVECPECWRMFCAKCGVGWHGDMNC-----------TEF-------QRLLKNGGVDREEEMTMKLADERKW-----KRCPHCKILVEKIEGAD
        + E       C  C   FC  C + +HG   C            E+       +RLL      R  +  ++  + ++W     K CP C   +EK++G +
Subjt:  VDEEDMEAVECPECWRMFCAKCGVGWHGDMNC-----------TEF-------QRLLKNGGVDREEEMTMKLADERKW-----KRCPHCKILVEKIEGAD

Query:  RNFAT
        +   T
Subjt:  RNFAT

Arabidopsis top hitse value%identityAlignment
AT2G26135.1 RING/U-box protein with C6HC-type zinc finger7.8e-2230.17Show/hide
Query:  CTICTDTK-SASEMFTSTGCSHTFCADCISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGM---
        CTIC D   +A  MF    C H FC++C+ +HI   L     + CP  +C + L    C + +  +V E W   + +  +     VYCP   CSA M   
Subjt:  CTICTDTK-SASEMFTSTGCSHTFCADCISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGM---

Query:  -VDEEDMEAVECPECWRMFCAKCGVGWHGDMNCTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEGADR
         +D+       C +C   FC KC V WH +++C  +++L  N   +  ++   +LA++  W++C  CK ++E  +G  R
Subjt:  -VDEEDMEAVECPECWRMFCAKCGVGWHGDMNCTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEGADR

AT3G14250.1 RING/U-box superfamily protein1.7e-4836.47Show/hide
Query:  ASSSHGSSLSVDDIYFSVLHEHQSVFPISDEIFAEELQLQESIASSLFTSTIMSN-------------KPSP-----NSESSGSTTLCTICTDTKSASEM
        +S+   + + VD+ Y S L ++  +FPI+DE +A E+ LQE++ SS   ST+  N             K  P     N     S  LC IC D K +S++
Subjt:  ASSSHGSSLSVDDIYFSVLHEHQSVFPISDEIFAEELQLQESIASSLFTSTIMSN-------------KPSP-----NSESSGSTTLCTICTDTKSASEM

Query:  FT-STGCSHTFCADCISKHIAAKL-EDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDMEA----VEC
        F  +T C+H +C DC  +++A K+ E++  +KCP+ +C  ++EP  C   +PK+V +RW   L ++++  W   YCPFKDCSA MV+ E+ +A     EC
Subjt:  FT-STGCSHTFCADCISKHIAAKL-EDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDMEA----VEC

Query:  PECWRMFCAKCGVGWHGDMNCTEFQRL--LKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEG
          C R+FC +C V WH  + C EFQR    K    D ++ + +++A  ++W+RCP CK  V+K+EG
Subjt:  PECWRMFCAKCGVGWHGDMNCTEFQRL--LKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEG

AT3G45540.1 RING/U-box protein with C6HC-type zinc finger2.0e-2226.55Show/hide
Query:  QSVFPISDEIFAEELQLQESIASSLFTSTIMSNKPSPNSESSGSTTLCTICTDTK-SASEMFTSTGCSHTFCADCISKHIAAKLEDSMAVKCPEPKCAAV
        +S FPI  E   + +     +A     S I  +   P    +   T C IC D   + ++MF    C H FC+DC+ +HI  +L +   ++CP  +C   
Subjt:  QSVFPISDEIFAEELQLQESIASSLFTSTIMSNKPSPNSESSGSTTLCTICTDTK-SASEMFTSTGCSHTFCADCISKHIAAKLEDSMAVKCPEPKCAAV

Query:  LEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVD-------EEDMEAVECPECWRMFCAKCGVGWHGDMNCTEFQRLLKNGGVDREEE
        L+   C + +  ++ E W   + + ++     +YCP   CSA M +       +ED     C +C ++FC KC V WH +++C ++++L  N      + 
Subjt:  LEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVD-------EEDMEAVECPECWRMFCAKCGVGWHGDMNCTEFQRLLKNGGVDREEE

Query:  MTMKLADERKWKRCPHCKILVEKIEG
            LA++++W++C  C+ ++E  +G
Subjt:  MTMKLADERKWKRCPHCKILVEKIEG

AT3G53690.1 RING/U-box superfamily protein2.0e-4647.03Show/hide
Query:  NSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADCISKHIAAKLEDS-MAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPF
        +S S  +T  C IC D+KS  E F   GCSH +C DC+SK+IAAKL+D+ ++++CP   C+  LEP+ C   +PKEV +RWGDAL +A++++ K  YCP+
Subjt:  NSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADCISKHIAAKLEDS-MAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPF

Query:  KDCSAGMVDEED---MEAVECPECWRMFCAKCGVGWHGDMNCTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEG
        KDCSA +  EE    M+  ECP C RM C +CG  WH +M C EFQ+L  N    R++ +   +A ++KWKRCP CK  +EK +G
Subjt:  KDCSAGMVDEED---MEAVECPECWRMFCAKCGVGWHGDMNCTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEG

AT5G60250.1 zinc finger (C3HC4-type RING finger) family protein2.0e-2227.89Show/hide
Query:  SLSVDDIYFSVLH--EHQSVFPISDEI-FAEELQLQESIASSLFTSTIMSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADCISKHIAAK
        SL +DD+   + H   +Q V    +++ FA +L  +ESI S      +++    P    +     C IC +   A  MF+   C H FC  C+ +H+  K
Subjt:  SLSVDDIYFSVLH--EHQSVFPISDEI-FAEELQLQESIASSLFTSTIMSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADCISKHIAAK

Query:  LEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDMEAVE-------------CPECWRMFCAKCGVGW
        L   MA KCP   C + L  + C   +  ++ + W   L +  +   + VYCP+  CSA M   +  E+ +             C EC  +FC  C V W
Subjt:  LEDSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDMEAVE-------------CPECWRMFCAKCGVGW

Query:  HGDMNCTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEGAD
        HG+++CTE+++L      D  +     LA+ + W++C  C+ ++E  +G +
Subjt:  HGDMNCTEFQRLLKNGGVDREEEMTMKLADERKWKRCPHCKILVEKIEGAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTGGATGCATCATCAAGCCACGGCTCTTCCCTCTCCGTCGACGATATATACTTCTCTGTCCTTCACGAACACCAATCCGTCTTCCCAATCTCCGACGAAATCTT
CGCCGAAGAGTTACAGCTCCAGGAATCAATCGCTTCCTCCTTATTCACTTCAACAATAATGTCCAATAAACCATCGCCCAACTCCGAATCTTCTGGTTCTACAACCCTAT
GCACAATCTGCACCGATACCAAATCCGCCTCCGAAATGTTCACATCCACCGGCTGTTCCCATACATTCTGCGCCGATTGCATCTCAAAACACATAGCCGCAAAGCTCGAG
GATTCCATGGCGGTGAAATGCCCAGAGCCAAAATGCGCGGCGGTGCTGGAACCGGAAATGTGCGATTCGTTCGTTCCGAAAGAGGTGTTGGAGAGATGGGGAGATGCTCT
GTTGAAGGCAATGCTTCTGAAGTGGAAGATGGTGTACTGTCCATTCAAAGACTGCTCGGCAGGGATGGTGGACGAGGAAGATATGGAGGCGGTTGAATGCCCTGAGTGTT
GGAGAATGTTCTGCGCCAAGTGTGGAGTGGGATGGCATGGGGACATGAACTGCACGGAGTTTCAGAGATTGCTTAAGAACGGAGGAGTAGACAGAGAGGAGGAGATGACA
ATGAAACTGGCGGATGAACGGAAATGGAAGCGATGCCCTCATTGCAAGATATTAGTCGAGAAGATCGAAGGTGCGGATCGGAATTTTGCTACAGCTGTGGAGCTAAGTGG
AATGGCCACCATGCATGTCCGCCCTCAGCTTATGAACGTACAGTCTATCGACGTTGACTTGCACCCGCCGGTCGTCCTTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTGGATGCATCATCAAGCCACGGCTCTTCCCTCTCCGTCGACGATATATACTTCTCTGTCCTTCACGAACACCAATCCGTCTTCCCAATCTCCGACGAAATCTT
CGCCGAAGAGTTACAGCTCCAGGAATCAATCGCTTCCTCCTTATTCACTTCAACAATAATGTCCAATAAACCATCGCCCAACTCCGAATCTTCTGGTTCTACAACCCTAT
GCACAATCTGCACCGATACCAAATCCGCCTCCGAAATGTTCACATCCACCGGCTGTTCCCATACATTCTGCGCCGATTGCATCTCAAAACACATAGCCGCAAAGCTCGAG
GATTCCATGGCGGTGAAATGCCCAGAGCCAAAATGCGCGGCGGTGCTGGAACCGGAAATGTGCGATTCGTTCGTTCCGAAAGAGGTGTTGGAGAGATGGGGAGATGCTCT
GTTGAAGGCAATGCTTCTGAAGTGGAAGATGGTGTACTGTCCATTCAAAGACTGCTCGGCAGGGATGGTGGACGAGGAAGATATGGAGGCGGTTGAATGCCCTGAGTGTT
GGAGAATGTTCTGCGCCAAGTGTGGAGTGGGATGGCATGGGGACATGAACTGCACGGAGTTTCAGAGATTGCTTAAGAACGGAGGAGTAGACAGAGAGGAGGAGATGACA
ATGAAACTGGCGGATGAACGGAAATGGAAGCGATGCCCTCATTGCAAGATATTAGTCGAGAAGATCGAAGGTGCGGATCGGAATTTTGCTACAGCTGTGGAGCTAAGTGG
AATGGCCACCATGCATGTCCGCCCTCAGCTTATGAACGTACAGTCTATCGACGTTGACTTGCACCCGCCGGTCGTCCTTAATTAA
Protein sequenceShow/hide protein sequence
MAVDASSSHGSSLSVDDIYFSVLHEHQSVFPISDEIFAEELQLQESIASSLFTSTIMSNKPSPNSESSGSTTLCTICTDTKSASEMFTSTGCSHTFCADCISKHIAAKLE
DSMAVKCPEPKCAAVLEPEMCDSFVPKEVLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDMEAVECPECWRMFCAKCGVGWHGDMNCTEFQRLLKNGGVDREEEMT
MKLADERKWKRCPHCKILVEKIEGADRNFATAVELSGMATMHVRPQLMNVQSIDVDLHPPVVLN