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Carg06479 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06479
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMucin-5AC like
Genome locationCarg_Chr14:10165480..10165887
RNA-Seq ExpressionCarg06479
SyntenyCarg06479
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581894.1 hypothetical protein SDJN03_21896, partial [Cucurbita argyrosperma subsp. sororia]1.2e-75100Show/hide
Query:  MATIEKCKSKPRFFDRFFPPRPLGAGLDYSAPPPNSVCQSFFKVASTVKSRASALLFPFDAGCVHDPWGDAVDGLTCTTQMGLTLPEFDRDAIVIGGMEM
        MATIEKCKSKPRFFDRFFPPRPLGAGLDYSAPPPNSVCQSFFKVASTVKSRASALLFPFDAGCVHDPWGDAVDGLTCTTQMGLTLPEFDRDAIVIGGMEM
Subjt:  MATIEKCKSKPRFFDRFFPPRPLGAGLDYSAPPPNSVCQSFFKVASTVKSRASALLFPFDAGCVHDPWGDAVDGLTCTTQMGLTLPEFDRDAIVIGGMEM

Query:  RRWKPCVVDGFEGFEGFENGDEAEKEKPILLQGFA
        RRWKPCVVDGFEGFEGFENGDEAEKEKPILLQGFA
Subjt:  RRWKPCVVDGFEGFEGFENGDEAEKEKPILLQGFA

XP_008447517.1 PREDICTED: uncharacterized protein LOC103489947 [Cucumis melo]3.3e-2548.73Show/hide
Query:  MATIEKCKSKPRFFDRFFPPRPLGAGLDYSAPPPNSVCQSFFKVASTVKSRASALLFPFDAGCVHDPWG-------DAVDGL--------TCTTQMGLTL
        M   E    +P FFD+  PPR   AGL+  A PP+S+ ++FFK AS VKSRA+ALL P D     DPW        D V G+         C T+ GL L
Subjt:  MATIEKCKSKPRFFDRFFPPRPLGAGLDYSAPPPNSVCQSFFKVASTVKSRASALLFPFDAGCVHDPWG-------DAVDGL--------TCTTQMGLTL

Query:  PEFDRDAIVIGGMEMRRWKPCVVDGFEGFEGFENGDEAEK--------EKPILLQGFA
        PEF +D +VIGGME RR K CVVD   G EG E GDEAEK        EKPIL +GFA
Subjt:  PEFDRDAIVIGGMEMRRWKPCVVDGFEGFEGFENGDEAEK--------EKPILLQGFA

XP_022979554.1 uncharacterized protein LOC111479231 [Cucurbita maxima]6.4e-6991.85Show/hide
Query:  MATIEKCKSKPRFFDRFFPPRPLGAGLDYSAPPPNSVCQSFFKVASTVKSRASALLFPFDAGCVHDPWGDAVDGLTCTTQMGLTLPEFDRDAIVIGGMEM
        MATIEKCKSKPRFFDR FPPRP+GAGLD SAPPPNS+CQ+FFKVASTVKSRA+ALL P DAGCV+DPWGDAVDGLTCTTQMGLTLPEFDRDAIVIGGMEM
Subjt:  MATIEKCKSKPRFFDRFFPPRPLGAGLDYSAPPPNSVCQSFFKVASTVKSRASALLFPFDAGCVHDPWGDAVDGLTCTTQMGLTLPEFDRDAIVIGGMEM

Query:  RRWKPCVVDGFEGFEGFENGDEAEKEKPILLQGFA
        RRWKPCVVDGFEGFEGFE GDEAEKE+PILLQGFA
Subjt:  RRWKPCVVDGFEGFEGFENGDEAEKEKPILLQGFA

XP_023526895.1 uncharacterized protein LOC111790262 [Cucurbita pepo subsp. pepo]4.0e-6390.37Show/hide
Query:  MATIEKCKSKPRFFDRFFPPRPLGAGLDYSAPPPNSVCQSFFKVASTVKSRASALLFPFDAGCVHDPWGDAVDGLTCTTQMGLTLPEFDRDAIVIGGMEM
        MATIEKCKSK RFFDR FPPRPLGA L  SAPPPNS+CQSFFKVASTVKSRA A LFPFDAGCV+DPWGDAVDGLTCTTQMGLTLPEFDRDAIVIGGMEM
Subjt:  MATIEKCKSKPRFFDRFFPPRPLGAGLDYSAPPPNSVCQSFFKVASTVKSRASALLFPFDAGCVHDPWGDAVDGLTCTTQMGLTLPEFDRDAIVIGGMEM

Query:  RRWKPCVVDGFEGFEGFENGDEAEKEKPILLQGFA
        RRWKPCVVD   GFEGFE GDEAEKEKPILLQGFA
Subjt:  RRWKPCVVDGFEGFEGFENGDEAEKEKPILLQGFA

XP_038900451.1 uncharacterized protein LOC120087668 [Benincasa hispida]1.2e-2246.15Show/hide
Query:  MATIEKCKSKPRFFDRFFPPRPLGAGLDYSAPPPNSVCQSFFKVASTVKSRASALLFPFDAGCVHDPWG-------DAVDGL--------TCTTQMGLTL
        M   E+    P  FD+  PPR   AGL+  A PP+S+ ++FFK AS VKS A+ALL P D     DPW        D V G+         C T+ GL L
Subjt:  MATIEKCKSKPRFFDRFFPPRPLGAGLDYSAPPPNSVCQSFFKVASTVKSRASALLFPFDAGCVHDPWG-------DAVDGL--------TCTTQMGLTL

Query:  PEFDRDAIVIGGMEMRRWKPCVVDGFEGFEGFENGDEA------EKEKPILLQGFA
        PE   D +VIGGME RR K CVVD   G EG E GDEA      ++EKPIL +GFA
Subjt:  PEFDRDAIVIGGMEMRRWKPCVVDGFEGFEGFENGDEA------EKEKPILLQGFA

TrEMBL top hitse value%identityAlignment
A0A0A0LDD6 Uncharacterized protein1.4e-2146.31Show/hide
Query:  MATIEKCKSKPRFFDRFFPPRPLGAGLDYSAPPPNSVCQSFFKVASTVKSRASALLFPFDAGCVHDPWG-------DAVDGLTCTTQMGLTLPEFDRDAI
        M   E    +P FF +  PPR   AGL+ SA PP+S+ ++FFK AS VKSRA+A L   D      P         D      C T+ GL LPEF +D +
Subjt:  MATIEKCKSKPRFFDRFFPPRPLGAGLDYSAPPPNSVCQSFFKVASTVKSRASALLFPFDAGCVHDPWG-------DAVDGLTCTTQMGLTLPEFDRDAI

Query:  VIGGMEMRRWKPCVVDGFEGFEGFENGDEAEKE-------KPILLQGFA
        VIGGME RR K CVVD   G EG E GD+AEKE       KP+L +GFA
Subjt:  VIGGMEMRRWKPCVVDGFEGFEGFENGDEAEKE-------KPILLQGFA

A0A1S3BI85 uncharacterized protein LOC1034899471.6e-2548.73Show/hide
Query:  MATIEKCKSKPRFFDRFFPPRPLGAGLDYSAPPPNSVCQSFFKVASTVKSRASALLFPFDAGCVHDPWG-------DAVDGL--------TCTTQMGLTL
        M   E    +P FFD+  PPR   AGL+  A PP+S+ ++FFK AS VKSRA+ALL P D     DPW        D V G+         C T+ GL L
Subjt:  MATIEKCKSKPRFFDRFFPPRPLGAGLDYSAPPPNSVCQSFFKVASTVKSRASALLFPFDAGCVHDPWG-------DAVDGL--------TCTTQMGLTL

Query:  PEFDRDAIVIGGMEMRRWKPCVVDGFEGFEGFENGDEAEK--------EKPILLQGFA
        PEF +D +VIGGME RR K CVVD   G EG E GDEAEK        EKPIL +GFA
Subjt:  PEFDRDAIVIGGMEMRRWKPCVVDGFEGFEGFENGDEAEK--------EKPILLQGFA

A0A5A7U9B5 Uncharacterized protein1.6e-2548.73Show/hide
Query:  MATIEKCKSKPRFFDRFFPPRPLGAGLDYSAPPPNSVCQSFFKVASTVKSRASALLFPFDAGCVHDPWG-------DAVDGL--------TCTTQMGLTL
        M   E    +P FFD+  PPR   AGL+  A PP+S+ ++FFK AS VKSRA+ALL P D     DPW        D V G+         C T+ GL L
Subjt:  MATIEKCKSKPRFFDRFFPPRPLGAGLDYSAPPPNSVCQSFFKVASTVKSRASALLFPFDAGCVHDPWG-------DAVDGL--------TCTTQMGLTL

Query:  PEFDRDAIVIGGMEMRRWKPCVVDGFEGFEGFENGDEAEK--------EKPILLQGFA
        PEF +D +VIGGME RR K CVVD   G EG E GDEAEK        EKPIL +GFA
Subjt:  PEFDRDAIVIGGMEMRRWKPCVVDGFEGFEGFENGDEAEK--------EKPILLQGFA

A0A6J1GBZ4 uncharacterized protein LOC1114525874.1e-2142.94Show/hide
Query:  MATIEKCKSKPRFFDRFFPPRPLGAGLDYSAPPPNSVCQSFFKVASTVKSRASALLF-----PFDAGCVHDPWG-------DAVDGL--------TCTTQ
        M   E+ +SKP  FD+  PPR   AGL+  A PP+S+ ++FFK AS +KS A+A L        D   V D W        D V G+         C T 
Subjt:  MATIEKCKSKPRFFDRFFPPRPLGAGLDYSAPPPNSVCQSFFKVASTVKSRASALLF-----PFDAGCVHDPWG-------DAVDGL--------TCTTQ

Query:  MGLTLPEFDRDAIVIGGMEMRRWKPCVVDGFEGFEGFENGDEA--------EKEKPILLQGFA
         GL LPEF+ D +V+GGME RR K CVVD     EG E GDEA        E+E+PIL +GFA
Subjt:  MGLTLPEFDRDAIVIGGMEMRRWKPCVVDGFEGFEGFENGDEA--------EKEKPILLQGFA

A0A6J1IWY2 uncharacterized protein LOC1114792313.1e-6991.85Show/hide
Query:  MATIEKCKSKPRFFDRFFPPRPLGAGLDYSAPPPNSVCQSFFKVASTVKSRASALLFPFDAGCVHDPWGDAVDGLTCTTQMGLTLPEFDRDAIVIGGMEM
        MATIEKCKSKPRFFDR FPPRP+GAGLD SAPPPNS+CQ+FFKVASTVKSRA+ALL P DAGCV+DPWGDAVDGLTCTTQMGLTLPEFDRDAIVIGGMEM
Subjt:  MATIEKCKSKPRFFDRFFPPRPLGAGLDYSAPPPNSVCQSFFKVASTVKSRASALLFPFDAGCVHDPWGDAVDGLTCTTQMGLTLPEFDRDAIVIGGMEM

Query:  RRWKPCVVDGFEGFEGFENGDEAEKEKPILLQGFA
        RRWKPCVVDGFEGFEGFE GDEAEKE+PILLQGFA
Subjt:  RRWKPCVVDGFEGFEGFENGDEAEKEKPILLQGFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15230.1 unknown protein2.0e-0728.24Show/hide
Query:  IEKCKSKPRFFDRFFPPRPLGAGLDYSAPPPNSVCQSFFKVASTVKSRASALL-FPFDAGCVHDPWGDAVDGLTCTTQMGLTLPEFDRDAIVIGGMEMRR
        +E  K +    D   PP    AGL+  A PP S+ ++F K A+ VKSRA+++     + GC+ DP                 +PE   D I++GG   R 
Subjt:  IEKCKSKPRFFDRFFPPRPLGAGLDYSAPPPNSVCQSFFKVASTVKSRASALL-FPFDAGCVHDPWGDAVDGLTCTTQMGLTLPEFDRDAIVIGGMEMRR

Query:  WKPCVVDGFEGFEGFENGDEAEKEKPILLQG
          PC+       +G E   E+++   +++ G
Subjt:  WKPCVVDGFEGFEGFENGDEAEKEKPILLQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACGATTGAAAAATGCAAATCCAAACCACGTTTCTTCGATCGATTCTTCCCTCCGCGTCCCCTAGGCGCTGGCCTTGATTATTCCGCCCCTCCTCCCAATTCAGT
TTGCCAATCTTTCTTCAAGGTAGCCTCCACCGTGAAATCCAGGGCCTCCGCCCTTCTTTTTCCCTTCGATGCGGGCTGCGTCCATGATCCATGGGGCGATGCCGTCGACG
GACTGACTTGCACGACGCAGATGGGATTGACATTGCCGGAATTTGATCGAGACGCGATCGTTATTGGGGGAATGGAGATGAGGAGATGGAAGCCTTGTGTGGTAGATGGA
TTTGAAGGATTTGAAGGATTCGAGAATGGAGATGAAGCCGAGAAGGAGAAACCTATTTTACTCCAAGGTTTTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACGATTGAAAAATGCAAATCCAAACCACGTTTCTTCGATCGATTCTTCCCTCCGCGTCCCCTAGGCGCTGGCCTTGATTATTCCGCCCCTCCTCCCAATTCAGT
TTGCCAATCTTTCTTCAAGGTAGCCTCCACCGTGAAATCCAGGGCCTCCGCCCTTCTTTTTCCCTTCGATGCGGGCTGCGTCCATGATCCATGGGGCGATGCCGTCGACG
GACTGACTTGCACGACGCAGATGGGATTGACATTGCCGGAATTTGATCGAGACGCGATCGTTATTGGGGGAATGGAGATGAGGAGATGGAAGCCTTGTGTGGTAGATGGA
TTTGAAGGATTTGAAGGATTCGAGAATGGAGATGAAGCCGAGAAGGAGAAACCTATTTTACTCCAAGGTTTTGCTTAA
Protein sequenceShow/hide protein sequence
MATIEKCKSKPRFFDRFFPPRPLGAGLDYSAPPPNSVCQSFFKVASTVKSRASALLFPFDAGCVHDPWGDAVDGLTCTTQMGLTLPEFDRDAIVIGGMEMRRWKPCVVDG
FEGFEGFENGDEAEKEKPILLQGFA