; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg06480 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06480
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRibosomal protein L37
Genome locationCarg_Chr14:10166732..10169485
RNA-Seq ExpressionCarg06480
SyntenyCarg06480
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001569 - Ribosomal protein L37e
IPR011331 - Ribosomal protein L37ae/L37e
IPR011332 - Zinc-binding ribosomal protein
IPR018267 - Ribosomal protein L37e, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150495.1 60S ribosomal protein L37-3 [Momordica charantia]6.6e-4497.89Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKR YNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGT+AAPRSKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA

XP_022955411.1 60S ribosomal protein L37-3 [Cucurbita moschata]6.0e-45100Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA

XP_031252760.1 60S ribosomal protein L37-3 [Pistacia vera]3.0e-4497.89Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRY+RHVPRRFKSGFREGTQAAPR+KGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA

XP_038693145.1 60S ribosomal protein L37-3 [Tripterygium wilfordii]1.5e-4395.79Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRY+RH+PRRFKSGFREGTQAAPR+KGAAA+A
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA

XP_038717722.1 60S ribosomal protein L37-3 [Tripterygium wilfordii]6.6e-4496.84Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRY+RH+PRRFKSGFREGTQAAPRSKGAAA+A
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA

TrEMBL top hitse value%identityAlignment
A0A6J1D8M5 Ribosomal protein L373.2e-4497.89Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKR YNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGT+AAPRSKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA

A0A6J1GTP8 Ribosomal protein L372.9e-45100Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA

A0A6J1IW96 Ribosomal protein L372.9e-45100Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA

A0A6J1KAY5 Ribosomal protein L373.2e-4497.89Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKR YNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGT+AAPRSKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA

A0A7J7CYG1 Ribosomal protein L373.2e-4496.84Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRY+RH+PRRFKSGFREGTQAAPRSKGAAA+A
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA

SwissProt top hitse value%identityAlignment
Q43292 60S ribosomal protein L37-22.9e-4287.37Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA
        M KGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACA+PAARKRTYNWSVKAIRRKTTGTGRMRY+R+VPRRFK+GFREGT+A PR+KG A+SA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA

Q8LEM8 60S ribosomal protein L37-35.8e-4388.42Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA
        MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACA+PAARKRTYNWSVKAIRRKTTGTGRMRY+R+VPRRFK+GFREGT+A PRSK +A+SA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA

Q8LFH7 60S ribosomal protein L37-14.9e-4287.37Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA
        MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACA+PAARKRTYNWSVKAIRRKTTGTGRMRY+R+VPRRFK+ FREGTQA PR+K AA+S+
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA

Q90YT1 60S ribosomal protein L374.8e-2967.37Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA
        M KGT SFGKRRNKTHTLC RCG +++HLQKS C  C +PA RKR YNWS KA RR TTGTGRMR+M+ V RRF++GFREGT   PR    AAS+
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA

Q9VXX8 Probable 60S ribosomal protein L37-A2.1e-2967.39Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAA
        M KGT SFGKR NKTHTLC RCGR S+H+QKS C+ C +PAA+ R+YNWSVKA RRKTTGTGRM++++ V RRF++GFREGTQA P+   A+
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAA

Arabidopsis top hitse value%identityAlignment
AT1G15250.1 Zinc-binding ribosomal protein family protein3.5e-4387.37Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA
        MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACA+PAARKRTYNWSVKAIRRKTTGTGRMRY+R+VPRRFK+ FREGTQA PR+K AA+S+
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA

AT1G52300.1 Zinc-binding ribosomal protein family protein2.0e-4387.37Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA
        M KGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACA+PAARKRTYNWSVKAIRRKTTGTGRMRY+R+VPRRFK+GFREGT+A PR+KG A+SA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA

AT3G16080.1 Zinc-binding ribosomal protein family protein4.1e-4488.42Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA
        MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACA+PAARKRTYNWSVKAIRRKTTGTGRMRY+R+VPRRFK+GFREGT+A PRSK +A+SA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAAGGGAACGGGAAGTTTCGGTAAGAGGAGGAACAAGACCCACACTCTCTGTGTTAGATGTGGCCGCCGCAGCTTCCACCTGCAGAAGAGTCGATGCTCTGCCTG
TGCATTTCCAGCCGCCCGTAAGCGTACATATAACTGGAGCGTAAAGGCGATCCGAAGGAAGACCACTGGAACTGGGCGGATGAGATACATGCGTCATGTTCCTCGCAGAT
TCAAGAGTGGTTTCAGAGAAGGTACTCAAGCAGCGCCAAGGAGCAAAGGAGCAGCCGCATCAGCATAA
mRNA sequenceShow/hide mRNA sequence
CATCGTCGAATCCGACTAAATGGGTAAGGGAACGGGAAGTTTCGGTAAGAGGAGGAACAAGACCCACACTCTCTGTGTTAGATGTGGCCGCCGCAGCTTCCACCTGCAGA
AGAGTCGATGCTCTGCCTGTGCATTTCCAGCCGCCCGTAAGCGTACATATAACTGGAGCGTAAAGGCGATCCGAAGGAAGACCACTGGAACTGGGCGGATGAGATACATG
CGTCATGTTCCTCGCAGATTCAAGAGTGGTTTCAGAGAAGGTACTCAAGCAGCGCCAAGGAGCAAAGGAGCAGCCGCATCAGCATAAGACATTAAAGGTTACTTGTGGCA
CAACTTGGTACCATATTTATAGCTTCTAGGAGAAGTTTGTCATTTTTGGGACCAGAATCTATAAGAATTTTGTTTTATGATGTTAACACCTTCAATACTGAAACTTAATT
TTATTTCTTACTGTATTGTTTATGGAAATTTTTATTGTTGTTTTGAGACCAGTTTCACCTTCGGTTAATCCATGTCTTGAGCTATTTACATCTAATCATTGTTGGAGTTT
TTGCTGGTAGATATTGTTACCCTGAAGCCAGGGTAGAATCAGTTAGTAAGAAATTTGAGTCTTAAATCATGTGTTAATGAGTTGTTCCTCACTCATATATATATATATGA
TTAGGGTTGATAATCCAGAATAACTCAGCTAGTTGCTATTCTTTTTTTGGAATTGTTAGTGGTAGGGGTATGACTTGGTTATTGTTACAATTACTACATAACTAAGAAAC
CACTCGTTAGGAGATGTAGAGGCCGACTCAAGGAAATGGGCCATTGTAAAGCATCAAAACTAAGGGAAAAGATTGTCATCTTTTGGGATCGCAGGAAGAGAAAATTACTA
TAGGCTTTCGAAACAAGGAAATGAAGAAAGATGATGTTGAAGTGCATATAAGTTCAAACACTCTTATCTAGAACCTATTAAGCCTCTAAAAAAATCCTTCCATATCTTTA
TAGCTGTACATATCAGAGGTATGTAAGATGCTCGTTCTGTTCAAGAATACGGCTTCAATTTAAGGACAGTTGATGTGAACAATACCATGAATTACGAGTGTGCTGATGCT
ACTTTTGGAGGTCTATTAAGTCTTCTATCCAATCTCTAGTGTATAGATAAGTTGACAGACTGTTGATTCAAATTCTCTCTTTCCTTTTTGGACAAAACAGACCCTCCTGC
GAGCTATATCTTAAAAAACCTTACATTAACAGGGATCAGAAATTTCAGAAGTAGAGGGTGAGCAACTAAACAAGGGTTTGTGGAGCGTGAATGCTGAAGAATTTATGATC
TGTTGATTTCTTATCATCCTTTTGCATCTAAACAATTAAGAAGTGAGATTTGTTATCATTCTCAAGGTTGGTTGCATCTTTGCTGTGTTGATTTTCTGATCATCCTCGGA
CATTTTCAATTATAGTTAGACCGAGAATGTCAGGAATTCCATAGGACCGTTAGACCAAACATACTACAAGGAAATAGTCTTTATCTTGCCTAATAATATGTTGGTGATGT
GATGTGGAGTTCTTGAAGAGAACCCTTTTTCTTTCTAGCAACCAATATCTTAGGATGATGAGTTTGAAGAATGTGTAAATGGAGGAATCTCATAGTATCACAATTTTAAT
TTGAAATGTGTTTTGAACTTGTGACCATTAAGGAAGAGAATGAGTCTTTTATATTGGTTTGGTTCTCTCCTTTCCCTTTGGATCAATAGGTAAAGCTATTGGATTACTCC
ATCGACCTCGGTGTCTTTTCTTCTCGGAATCTAGTTTATTGCTGCTTGAAGATCTTTTTATTTGTAACTACGAATAACTTGTGAAAGATCGATCAATTTTGTTAGAATGA
TTATTTCAGTTTTATAAGTAGAGTAATATATAATAAAGCAAAATTGATTAGTTAGACCTCTTTAATTAATCAACTGAAAAGCGTTAAGAGTAAATTTGTATGGTCTAGCT
GTCCATAGTAACCATATATATAGTTTGAAGTCTTCAAATATAAAATAAGAAAAATAGATATGCTAAATATAAAATAATGATATATTAAATATTAAGATAATGTATATTAG
AAACATTAAATATATGCCTGAATTCTGAATTTCCAAATTGTTCGAAATTGAAGTTAGTTGAATATGGATTGAAATACTTTTATGATGTTTAAATATGATTTAAATAATAT
TTTAAATTTGAAAAATATTATCTCAAAGTCTATTAAAACTTGAGGATTTCTTTTAAGAGACTTTCATAAGTTAAAAGGGTTGAGATTTCATCTAGGTGGATT
Protein sequenceShow/hide protein sequence
MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRSKGAAASA