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Carg06505 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06505
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionBnaA03g00170D protein
Genome locationCarg_Chr14:10324182..10324962
RNA-Seq ExpressionCarg06505
SyntenyCarg06505
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581922.1 hypothetical protein SDJN03_21924, partial [Cucurbita argyrosperma subsp. sororia]5.4e-4393.58Show/hide
Query:  MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSSEE----EEKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAERRTSSSCCRN
        MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSS+E    ++KKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAERRTSSSCCRN
Subjt:  MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSSEE----EEKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAERRTSSSCCRN

Query:  EIPANRVAL
        EIPANRVAL
Subjt:  EIPANRVAL

KAG7018354.1 hypothetical protein SDJN02_20222 [Cucurbita argyrosperma subsp. argyrosperma]7.3e-56100Show/hide
Query:  MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSSEEEEKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAERRTSSSCCRNEIPA
        MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSSEEEEKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAERRTSSSCCRNEIPA
Subjt:  MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSSEEEEKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAERRTSSSCCRNEIPA

Query:  NRVALYNGILKQRSLRTQCSF
        NRVALYNGILKQRSLRTQCSF
Subjt:  NRVALYNGILKQRSLRTQCSF

XP_022955913.1 uncharacterized protein LOC111457756 [Cucurbita moschata]9.9e-5393.65Show/hide
Query:  MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSSEE-----EEKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAERRTSSSCCR
        MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSS+E     ++KKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAERRTSSSCCR
Subjt:  MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSSEE-----EEKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAERRTSSSCCR

Query:  NEIPANRVALYNGILKQRSLRTQCSF
        NEIPANRVALYNGILKQRSLRTQCSF
Subjt:  NEIPANRVALYNGILKQRSLRTQCSF

XP_022979503.1 uncharacterized protein LOC111479184 [Cucurbita maxima]1.0e-4989.76Show/hide
Query:  MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSSE---EEEKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAERR---TSSSCC
        MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSK+LLSSCFSS+   +++KKKKKVRFAEDVKEPKGNGEEYRREHDERV MAERR   TSSSCC
Subjt:  MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSSE---EEEKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAERR---TSSSCC

Query:  RNEIPANRVALYNGILKQRSLRTQCSF
        RNEIPANRVALYNG+LKQRSLRTQCSF
Subjt:  RNEIPANRVALYNGILKQRSLRTQCSF

XP_023528178.1 uncharacterized protein LOC111791169 [Cucurbita pepo subsp. pepo]7.8e-5089.84Show/hide
Query:  MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSSE---EEEKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAER----RTSSSC
        MSSILTSQGLVIATAMVVSSTALFLAFS HHKINPLPSKSLLSSCFSS+   +++KKKKKVRFAEDVKEPKGNGEEYRREHDER+AMAER    RTSSSC
Subjt:  MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSSE---EEEKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAER----RTSSSC

Query:  CRNEIPANRVALYNGILKQRSLRTQCSF
        CRNEIPANRVALYNGILKQRSLRTQCSF
Subjt:  CRNEIPANRVALYNGILKQRSLRTQCSF

TrEMBL top hitse value%identityAlignment
A0A1S3BY99 uncharacterized protein LOC1034947034.8e-3774.42Show/hide
Query:  MSSILTSQGLVIATAMVVSSTALFLAFSKHH--KINPL--PSKSLLSSCFSSEE--EEKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAE--RRTSSS
        MSSIL+SQGLVIATAMVVSSTALFLAFS HH   I+P+  PS SLL SCFSS+E  ++KKKKKVRFAEDVKEPKGNGEEYRREHDE++ + E  RR    
Subjt:  MSSILTSQGLVIATAMVVSSTALFLAFSKHH--KINPL--PSKSLLSSCFSSEE--EEKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAE--RRTSSS

Query:  CCRNEIPANRVALYNGILKQRSLRTQCSF
         CRN+IPANR+ALYNGILK RS R QCSF
Subjt:  CCRNEIPANRVALYNGILKQRSLRTQCSF

A0A6J1GAK8 uncharacterized protein LOC111452283 isoform X13.0e-3971.11Show/hide
Query:  MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSSEEE---------EKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAERR---
        MSSIL+SQGLVIATAMVVSSTALFLAFSKHHKI P PSKSLL SC SS+++         +KK KKVRFAEDVKEP+GNGEEYR+EHDE++AMAERR   
Subjt:  MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSSEEE---------EKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAERR---

Query:  --TSSSCCRNEIPANRVALYNGILKQRSLRTQCSF
          T++  C+N+ PAN++ALYNGILKQRS R QCSF
Subjt:  --TSSSCCRNEIPANRVALYNGILKQRSLRTQCSF

A0A6J1GVB7 uncharacterized protein LOC1114577564.8e-5393.65Show/hide
Query:  MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSSEE-----EEKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAERRTSSSCCR
        MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSS+E     ++KKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAERRTSSSCCR
Subjt:  MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSSEE-----EEKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAERRTSSSCCR

Query:  NEIPANRVALYNGILKQRSLRTQCSF
        NEIPANRVALYNGILKQRSLRTQCSF
Subjt:  NEIPANRVALYNGILKQRSLRTQCSF

A0A6J1IWF1 uncharacterized protein LOC1114791845.0e-5089.76Show/hide
Query:  MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSSE---EEEKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAERR---TSSSCC
        MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSK+LLSSCFSS+   +++KKKKKVRFAEDVKEPKGNGEEYRREHDERV MAERR   TSSSCC
Subjt:  MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSSE---EEEKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAERR---TSSSCC

Query:  RNEIPANRVALYNGILKQRSLRTQCSF
        RNEIPANRVALYNG+LKQRSLRTQCSF
Subjt:  RNEIPANRVALYNGILKQRSLRTQCSF

A0A6J1K8H4 uncharacterized protein LOC1114932076.7e-3972.18Show/hide
Query:  MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSSEEE---------EKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAERR---
        MSSIL+SQGLVIATAMVVSSTALFLAFSKHHKI P  SKSLL SC SS+++         +KK KKVRFAEDVKEP+GNGEEYR+EHDE+VAMAERR   
Subjt:  MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSSEEE---------EKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAERR---

Query:  TSSSCCRNEIPANRVALYNGILKQRSLRTQCSF
        T++  C+N+ PAN++ALYNGILKQRS R QCSF
Subjt:  TSSSCCRNEIPANRVALYNGILKQRSLRTQCSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52565.1 unknown protein2.9e-2655.04Show/hide
Query:  MSSILT-SQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSSEEEEK----KKKKVRFAEDVKEPKGNGEEYRREHDERVA---MAERRTSSS
        M+ IL+ S G+VIATAMV SSTALFLA S+    N    + +L SC SSEE++K    KKKKV+FAE+VKE KGNGEEYR++   R+    M +   + S
Subjt:  MSSILT-SQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSSEEEEK----KKKKVRFAEDVKEPKGNGEEYRREHDERVA---MAERRTSSS

Query:  CCRNEIPANRVALYNGILKQRSLRTQCSF
         CRN++PANR+ALYNGIL+ R  R QCS+
Subjt:  CCRNEIPANRVALYNGILKQRSLRTQCSF

AT3G15760.1 unknown protein6.5e-1848.03Show/hide
Query:  LVIATAMVVSSTALFLAFSK-------HHKINPLPSKSLLSSCFSSEE---EEKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAE-----RRTSSSCC
        +VIATAMV SSTALFLA ++       + K+     + +L SC SSEE   + KK KKVRFA++VK+ KGNGEEYRR    R ++ +      +T S C 
Subjt:  LVIATAMVVSSTALFLAFSK-------HHKINPLPSKSLLSSCFSSEE---EEKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAE-----RRTSSSCC

Query:  RNEIPANRVALYNGILKQRSLRTQCSF
         + +PANR+ALYNGIL+ R  R Q S+
Subjt:  RNEIPANRVALYNGILKQRSLRTQCSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCATTCTCACCTCTCAAGGTCTCGTCATTGCCACCGCCATGGTTGTCTCCTCCACCGCTCTCTTTCTTGCCTTCTCCAAGCACCACAAGATCAATCCACTCCC
TTCCAAATCACTTCTTTCTTCCTGCTTTTCCTCTGAAGAAGAAGAGAAGAAGAAGAAGAAGGTGAGATTTGCAGAGGATGTGAAGGAGCCAAAAGGGAATGGAGAAGAGT
ACAGAAGAGAGCACGATGAGAGAGTGGCTATGGCGGAAAGAAGAACAAGTAGCAGCTGCTGTAGAAACGAAATTCCTGCAAATCGTGTTGCTTTGTATAATGGAATTCTT
AAACAACGATCGCTAAGAACCCAATGTTCATTTTGA
mRNA sequenceShow/hide mRNA sequence
CAAAGTGAATGATATCATCTCATTGTAGAGAGTAGTGATTTGTGAGTTAGAATCTGAGGCTTTTGGTTTGTGTTTCTAGACGAGTGTAGAGGGCGACGCATGCAATTAAA
ATCTCCATCTTCATCTCCCCCACTTGCCAACTAAATTCCACCATCCATTTTCAAAAGAATACCCAAAATAAACACCTTCCGCCGGCGTCCATTTCTCCTTCCGCCACCCA
TGTCTTCCATTCTCACCTCTCAAGGTCTCGTCATTGCCACCGCCATGGTTGTCTCCTCCACCGCTCTCTTTCTTGCCTTCTCCAAGCACCACAAGATCAATCCACTCCCT
TCCAAATCACTTCTTTCTTCCTGCTTTTCCTCTGAAGAAGAAGAGAAGAAGAAGAAGAAGGTGAGATTTGCAGAGGATGTGAAGGAGCCAAAAGGGAATGGAGAAGAGTA
CAGAAGAGAGCACGATGAGAGAGTGGCTATGGCGGAAAGAAGAACAAGTAGCAGCTGCTGTAGAAACGAAATTCCTGCAAATCGTGTTGCTTTGTATAATGGAATTCTTA
AACAACGATCGCTAAGAACCCAATGTTCATTTTGA
Protein sequenceShow/hide protein sequence
MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSKSLLSSCFSSEEEEKKKKKVRFAEDVKEPKGNGEEYRREHDERVAMAERRTSSSCCRNEIPANRVALYNGIL
KQRSLRTQCSF