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Carg06525 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06525
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCalcium-binding EF-hand family protein
Genome locationCarg_Chr14:10514779..10515812
RNA-Seq ExpressionCarg06525
SyntenyCarg06525
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581953.1 hypothetical protein SDJN03_21955, partial [Cucurbita argyrosperma subsp. sororia]3.4e-82100Show/hide
Query:  MAERQKRPIGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCN
        MAERQKRPIGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCN
Subjt:  MAERQKRPIGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCN

Query:  EVAEDHDETLQLPEEWRSGVGLSQIFHHQPNISLVFKHFKPNLLAFTDYLPTEK
        EVAEDHDETLQLPEEWRSGVGLSQIFHHQPNISLVFKHFKPNLLAFTDYLPTEK
Subjt:  EVAEDHDETLQLPEEWRSGVGLSQIFHHQPNISLVFKHFKPNLLAFTDYLPTEK

KAG7018374.1 hypothetical protein SDJN02_20242 [Cucurbita argyrosperma subsp. argyrosperma]3.4e-82100Show/hide
Query:  MAERQKRPIGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCN
        MAERQKRPIGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCN
Subjt:  MAERQKRPIGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCN

Query:  EVAEDHDETLQLPEEWRSGVGLSQIFHHQPNISLVFKHFKPNLLAFTDYLPTEK
        EVAEDHDETLQLPEEWRSGVGLSQIFHHQPNISLVFKHFKPNLLAFTDYLPTEK
Subjt:  EVAEDHDETLQLPEEWRSGVGLSQIFHHQPNISLVFKHFKPNLLAFTDYLPTEK

XP_022956319.1 uncharacterized protein LOC111458052 [Cucurbita moschata]2.9e-8198.7Show/hide
Query:  MAERQKRPIGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCN
        MAERQKRPIGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNL+YEINQQFQSISKHHQLCN
Subjt:  MAERQKRPIGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCN

Query:  EVAEDHDETLQLPEEWRSGVGLSQIFHHQPNISLVFKHFKPNLLAFTDYLPTEK
        EVAEDHDETLQLPEEWR GVGLSQIFHHQPNISLVFKHFKPNLLAFTDYLPTEK
Subjt:  EVAEDHDETLQLPEEWRSGVGLSQIFHHQPNISLVFKHFKPNLLAFTDYLPTEK

XP_022980171.1 uncharacterized protein LOC111479641 [Cucurbita maxima]1.0e-7895.45Show/hide
Query:  MAERQKRPIGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCN
        MAE QKRP+GHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRV+PCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCN
Subjt:  MAERQKRPIGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCN

Query:  EVAEDHDETLQLPEEWRSGVGLSQIFHHQPNISLVFKHFKPNLLAFTDYLPTEK
        EVAEDHDETLQLPEEWR G GLSQIFHHQPNISLVFKHFKPNLLAF+DYLP EK
Subjt:  EVAEDHDETLQLPEEWRSGVGLSQIFHHQPNISLVFKHFKPNLLAFTDYLPTEK

XP_023525995.1 uncharacterized protein LOC111789606 [Cucurbita pepo subsp. pepo]8.7e-7896.15Show/hide
Query:  MAERQKRPIGHGLE-VDDSRHEKA-LRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQL
        MAE QKRP+GHGLE VDDSRHEKA LRAFDQNGV+RNSSKDGPSWRV+PCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQL
Subjt:  MAERQKRPIGHGLE-VDDSRHEKA-LRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQL

Query:  CNEVAEDHDETLQLPEEWRSGVGLSQIFHHQPNISLVFKHFKPNLLAFTDYLPTEK
        CNEVAEDHDETLQLPEEWRSGVGLSQIFHHQPNISLVFKHFKPNLLAFTDYLPTEK
Subjt:  CNEVAEDHDETLQLPEEWRSGVGLSQIFHHQPNISLVFKHFKPNLLAFTDYLPTEK

TrEMBL top hitse value%identityAlignment
A0A0A0KVL6 Uncharacterized protein3.4e-3570.25Show/hide
Query:  MAERQKRPIGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCN
        MAE QKR  GHG E D S HE  LR FD+NGV +NSSKDG +  VK CEVEKI RRLS+LEEDTRAMKKALF+SLEERRNLVYEINQQFQ I+K H L N
Subjt:  MAERQKRPIGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCN

Query:  EVA-------EDHDETLQLPE
        EVA       EDHDETL  P+
Subjt:  EVA-------EDHDETLQLPE

A0A1S4DZN5 uncharacterized protein LOC103494669 isoform X31.2e-4574.81Show/hide
Query:  LRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCNEVA------EDHDETLQLPEEWR
        LR FD+NGV + SSK G   RVK CEVE+I RRL++LEEDTRAMKKALF+SLEER+NLVYEINQQFQ I+K H+LCNEVA      EDHDETL  P+E R
Subjt:  LRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCNEVA------EDHDETLQLPEEWR

Query:  SGVGLSQIFHHQPNISLVFKHFKPNLLAFTD
         GVGLS+IFHHQ NISLVFKHFKPNLLAFTD
Subjt:  SGVGLSQIFHHQPNISLVFKHFKPNLLAFTD

A0A6J1DKS8 uncharacterized protein LOC1110209821.8e-5272.37Show/hide
Query:  MAERQKRPIGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCN
        MAE Q+ P  H +E D SRHE  LRAFDQNGV +  SKD P  RVK CEVEKISRRL++LEEDTR MKKALF+SLEE RNLVYEINQQFQSI+K HQLCN
Subjt:  MAERQKRPIGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCN

Query:  EVA-------EDHDETLQLPEEWRSGVGLSQIFHHQPNISLVFKHFKPNLLA
        EVA       EDHDETL  P+ WR+GVGLS+IFHHQPN+SLVFKHFK  LLA
Subjt:  EVA-------EDHDETLQLPEEWRSGVGLSQIFHHQPNISLVFKHFKPNLLA

A0A6J1GYP8 uncharacterized protein LOC1114580521.4e-8198.7Show/hide
Query:  MAERQKRPIGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCN
        MAERQKRPIGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNL+YEINQQFQSISKHHQLCN
Subjt:  MAERQKRPIGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCN

Query:  EVAEDHDETLQLPEEWRSGVGLSQIFHHQPNISLVFKHFKPNLLAFTDYLPTEK
        EVAEDHDETLQLPEEWR GVGLSQIFHHQPNISLVFKHFKPNLLAFTDYLPTEK
Subjt:  EVAEDHDETLQLPEEWRSGVGLSQIFHHQPNISLVFKHFKPNLLAFTDYLPTEK

A0A6J1ISW5 uncharacterized protein LOC1114796414.9e-7995.45Show/hide
Query:  MAERQKRPIGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCN
        MAE QKRP+GHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRV+PCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCN
Subjt:  MAERQKRPIGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCN

Query:  EVAEDHDETLQLPEEWRSGVGLSQIFHHQPNISLVFKHFKPNLLAFTDYLPTEK
        EVAEDHDETLQLPEEWR G GLSQIFHHQPNISLVFKHFKPNLLAF+DYLP EK
Subjt:  EVAEDHDETLQLPEEWRSGVGLSQIFHHQPNISLVFKHFKPNLLAFTDYLPTEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAACGCCAAAAACGCCCTATTGGGCATGGATTGGAAGTAGATGATTCACGCCATGAGAAGGCTTTAAGAGCATTTGATCAAAATGGGGTTACGAGAAACTCATC
AAAAGACGGTCCCAGTTGGAGAGTTAAACCTTGTGAAGTTGAGAAGATCAGTAGAAGACTGAGCCTTCTTGAAGAAGATACTAGAGCTATGAAGAAAGCTTTGTTTGAGA
GTTTGGAGGAAAGAAGAAATCTGGTGTATGAGATAAACCAGCAATTTCAGAGCATAAGCAAACACCATCAACTCTGTAACGAGGTAGCTGAAGATCACGATGAGACACTC
CAACTCCCTGAGGAATGGAGAAGTGGTGTTGGCCTATCACAAATCTTTCACCACCAACCAAATATATCTCTCGTCTTCAAACATTTCAAACCAAATTTGTTGGCATTCAC
TGATTATCTTCCAACAGAAAAATGA
mRNA sequenceShow/hide mRNA sequence
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCCGAAGCCCAAAAGTTAGAAAATTTTTAGAGGCCAAGTAAGAAAAAGTCTTCTTGTGTTCCACCT
TCACACCACAACCGAGAGAGCTTACGAACTGGCCTCAGAAATTGATGAAGCTGACTGTTTTCTAAGGCAGCTACAATGGCAGAACGCCAAAAACGCCCTATTGGGCATGG
ATTGGAAGTAGATGATTCACGCCATGAGAAGGCTTTAAGAGCATTTGATCAAAATGGGGTTACGAGAAACTCATCAAAAGACGGTCCCAGTTGGAGAGTTAAACCTTGTG
AAGTTGAGAAGATCAGTAGAAGACTGAGCCTTCTTGAAGAAGATACTAGAGCTATGAAGAAAGCTTTGTTTGAGAGTTTGGAGGAAAGAAGAAATCTGGTGTATGAGATA
AACCAGCAATTTCAGAGCATAAGCAAACACCATCAACTCTGTAACGAGGTAGCTGAAGATCACGATGAGACACTCCAACTCCCTGAGGAATGGAGAAGTGGTGTTGGCCT
ATCACAAATCTTTCACCACCAACCAAATATATCTCTCGTCTTCAAACATTTCAAACCAAATTTGTTGGCATTCACTGATTATCTTCCAACAGAAAAATGATCTATTTGGG
AGAGACCCGAAGAATGTAAGCATTGGGAGTTCGTCCTTTAACCAATTGAGTTATATTTAGGCTGGCTATTACAG
Protein sequenceShow/hide protein sequence
MAERQKRPIGHGLEVDDSRHEKALRAFDQNGVTRNSSKDGPSWRVKPCEVEKISRRLSLLEEDTRAMKKALFESLEERRNLVYEINQQFQSISKHHQLCNEVAEDHDETL
QLPEEWRSGVGLSQIFHHQPNISLVFKHFKPNLLAFTDYLPTEK