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Carg06558 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06558
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein LAX PANICLE 2-like
Genome locationCarg_Chr14:10716556..10717731
RNA-Seq ExpressionCarg06558
SyntenyCarg06558
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018407.1 hypothetical protein SDJN02_20275, partial [Cucurbita argyrosperma subsp. argyrosperma]6.2e-37100Show/hide
Query:  MGEQCMRNGSFIREMFRMEKHVEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPITFSPHSSTLNHLMLLHYGRKD
        MGEQCMRNGSFIREMFRMEKHVEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPITFSPHSSTLNHLMLLHYGRKD
Subjt:  MGEQCMRNGSFIREMFRMEKHVEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPITFSPHSSTLNHLMLLHYGRKD
XP_022955779.1 uncharacterized protein LOC111457668 isoform X1 [Cucurbita moschata]5.1e-2392.98Show/hide
Query:  EKHVEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPITFSPHSSTLNHLMLLHYGRKD
        E  VEIRCRGQEV+PFWTLADVRDRIWCSSSSDSPIT SPHSSTLNHLMLLHYGRKD
Subjt:  EKHVEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPITFSPHSSTLNHLMLLHYGRKD
XP_022955780.1 uncharacterized protein LOC111457668 isoform X2 [Cucurbita moschata]5.1e-2392.98Show/hide
Query:  EKHVEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPITFSPHSSTLNHLMLLHYGRKD
        E  VEIRCRGQEV+PFWTLADVRDRIWCSSSSDSPIT SPHSSTLNHLMLLHYGRKD
Subjt:  EKHVEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPITFSPHSSTLNHLMLLHYGRKD
XP_022979522.1 uncharacterized protein LOC111479202 [Cucurbita maxima]2.3e-2394.74Show/hide
Query:  EKHVEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPITFSPHSSTLNHLMLLHYGRKD
        E  VEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPIT SPHSSTLNHLMLLHYGRKD
Subjt:  EKHVEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPITFSPHSSTLNHLMLLHYGRKD
XP_023527520.1 uncharacterized protein LOC111790726 [Cucurbita pepo subsp. pepo]2.3e-2394.74Show/hide
Query:  EKHVEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPITFSPHSSTLNHLMLLHYGRKD
        E  VEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPIT SPHSSTLNHLMLLHYGRKD
Subjt:  EKHVEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPITFSPHSSTLNHLMLLHYGRKD
TrEMBL top hitse value%identityAlignment
A0A1S3BXD1 uncharacterized protein LOC1034946233.5e-1466.67Show/hide
Query:  EKHVEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPITFSPHSSTLNHLMLLHYGRKD
        E  +EIRCRGQE++PFWT+  VRDRIW ++SS+S  T  P SST NHLMLLHYGRK+
Subjt:  EKHVEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPITFSPHSSTLNHLMLLHYGRKD
A0A6J1GW07 uncharacterized protein LOC111457668 isoform X22.5e-2392.98Show/hide
Query:  EKHVEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPITFSPHSSTLNHLMLLHYGRKD
        E  VEIRCRGQEV+PFWTLADVRDRIWCSSSSDSPIT SPHSSTLNHLMLLHYGRKD
Subjt:  EKHVEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPITFSPHSSTLNHLMLLHYGRKD
A0A6J1GX93 uncharacterized protein LOC111457668 isoform X12.5e-2392.98Show/hide
Query:  EKHVEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPITFSPHSSTLNHLMLLHYGRKD
        E  VEIRCRGQEV+PFWTLADVRDRIWCSSSSDSPIT SPHSSTLNHLMLLHYGRKD
Subjt:  EKHVEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPITFSPHSSTLNHLMLLHYGRKD
A0A6J1I8S9 protein LAX PANICLE 2-like3.0e-1370.69Show/hide
Query:  EKHVEIRCRGQEVLPFWTLADVRDRIW--CSSSSDSPITFSPHSSTLNHLMLLHYGRK
        E  +EIRCRGQEV PFWTL  VRD IW   SSSSDS  T  PHSS  +HLMLLHYGRK
Subjt:  EKHVEIRCRGQEVLPFWTLADVRDRIW--CSSSSDSPITFSPHSSTLNHLMLLHYGRK
A0A6J1INX5 uncharacterized protein LOC1114792021.1e-2394.74Show/hide
Query:  EKHVEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPITFSPHSSTLNHLMLLHYGRKD
        E  VEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPIT SPHSSTLNHLMLLHYGRKD
Subjt:  EKHVEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPITFSPHSSTLNHLMLLHYGRKD
SwissProt top hitse value%identityAlignment
G3XKQ9 Protein LAX PANICLE 29.0e-0744.83Show/hide
Query:  EKHVEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPITFS--PHSSTLNHLMLLHYGRK
        E  VEI CRG+++LP  TL  VRD IWC   + SP      P +    H+M+L YGR+
Subjt:  EKHVEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPITFS--PHSSTLNHLMLLHYGRK
Arabidopsis top hitse value%identityAlignment
AT5G13250.1 RING finger protein1.1e-1056.9Show/hide
Query:  KHVEIRCRGQEVLPFWTLADVRDRIW----CSSSSDSPITFSPHSSTLNHLMLLHYGR
        + VEIRCRGQE+ P  TL  VRD IW     +SS    IT  P+SST +HLM+LHYGR
Subjt:  KHVEIRCRGQEVLPFWTLADVRDRIW----CSSSSDSPITFSPHSSTLNHLMLLHYGR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGAGCAGTGCATGAGAAATGGTTCTTTCATTAGAGAGATGTTTAGAATGGAAAAACATGTAGAGATAAGATGTAGAGGGCAAGAAGTGCTTCCCTTTTGGACATT
GGCGGACGTAAGAGATAGGATTTGGTGTAGTTCTTCATCAGACTCACCCATCACTTTCTCTCCTCACTCCTCAACCTTAAATCACTTGATGCTCCTTCACTACGGAAGGA
AGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGAGCAGTGCATGAGAAATGGTTCTTTCATTAGAGAGATGTTTAGAATGGAAAAACATGTAGAGATAAGATGTAGAGGGCAAGAAGTGCTTCCCTTTTGGACATT
GGCGGACGTAAGAGATAGGATTTGGTGTAGTTCTTCATCAGACTCACCCATCACTTTCTCTCCTCACTCCTCAACCTTAAATCACTTGATGCTCCTTCACTACGGAAGGA
AGGATTAA
Protein sequenceShow/hide protein sequence
MGEQCMRNGSFIREMFRMEKHVEIRCRGQEVLPFWTLADVRDRIWCSSSSDSPITFSPHSSTLNHLMLLHYGRKD