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Carg06580 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06580
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr14:10844157..10844642
RNA-Seq ExpressionCarg06580
SyntenyCarg06580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597679.1 hypothetical protein SDJN03_10859, partial [Cucurbita argyrosperma subsp. sororia]4.2e-0549.23Show/hide
Query:  GKRPNGLSSQWKIRGENGNRPISVRERNCVRNCFAHISHYDYVSSNSISSACVLYSSNLPFSPQN
        G  P G      IR ENGNRPISV ER CV  CFAHI HY +     +++  VL  SNLP S ++
Subjt:  GKRPNGLSSQWKIRGENGNRPISVRERNCVRNCFAHISHYDYVSSNSISSACVLYSSNLPFSPQN
KAG7018429.1 hypothetical protein SDJN02_20297, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-58100Show/hide
Query:  MKKKQGTRIFCKASKRHLVGKRPNGLSSQWKIRGENGNRPISVRERNCVRNCFAHISHYDYVSSNSISSACVLYSSNLPFSPQNRGGRRSGFIALGYTVY
        MKKKQGTRIFCKASKRHLVGKRPNGLSSQWKIRGENGNRPISVRERNCVRNCFAHISHYDYVSSNSISSACVLYSSNLPFSPQNRGGRRSGFIALGYTVY
Subjt:  MKKKQGTRIFCKASKRHLVGKRPNGLSSQWKIRGENGNRPISVRERNCVRNCFAHISHYDYVSSNSISSACVLYSSNLPFSPQNRGGRRSGFIALGYTVY

Query:  VLLCVFGVGIQALR
        VLLCVFGVGIQALR
Subjt:  VLLCVFGVGIQALR
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAAAGCAAGGAACAAGAATATTCTGTAAGGCAAGCAAAAGGCATTTAGTTGGGAAACGGCCAAACGGCCTTTCCTCGCAATGGAAGATAAGAGGCGAAAACGG
AAACCGCCCAATTTCAGTACGTGAAAGAAACTGTGTTAGAAACTGCTTTGCACACATCTCCCACTACGACTACGTCTCTTCCAATTCCATTTCCAGTGCTTGCGTACTCT
ACTCCTCTAATCTACCTTTTTCTCCGCAGAATCGTGGTGGCCGGAGAAGTGGATTTATTGCTCTGGGGTATACTGTTTATGTGCTTCTTTGTGTTTTTGGAGTTGGTATT
CAAGCCTTACGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAAAGCAAGGAACAAGAATATTCTGTAAGGCAAGCAAAAGGCATTTAGTTGGGAAACGGCCAAACGGCCTTTCCTCGCAATGGAAGATAAGAGGCGAAAACGG
AAACCGCCCAATTTCAGTACGTGAAAGAAACTGTGTTAGAAACTGCTTTGCACACATCTCCCACTACGACTACGTCTCTTCCAATTCCATTTCCAGTGCTTGCGTACTCT
ACTCCTCTAATCTACCTTTTTCTCCGCAGAATCGTGGTGGCCGGAGAAGTGGATTTATTGCTCTGGGGTATACTGTTTATGTGCTTCTTTGTGTTTTTGGAGTTGGTATT
CAAGCCTTACGCTGA
Protein sequenceShow/hide protein sequence
MKKKQGTRIFCKASKRHLVGKRPNGLSSQWKIRGENGNRPISVRERNCVRNCFAHISHYDYVSSNSISSACVLYSSNLPFSPQNRGGRRSGFIALGYTVYVLLCVFGVGI
QALR