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Carg06586 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06586
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionIQ domain-containing protein/TIG domain-containing protein/CG-1 domain-containing protein/Ank_2 domain-containing protein
Genome locationCarg_Chr14:10876720..10877139
RNA-Seq ExpressionCarg06586
SyntenyCarg06586
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582012.1 hypothetical protein SDJN03_22014, partial [Cucurbita argyrosperma subsp. sororia]1.3e-56100Show/hide
Query:  MMRRQQQDEQSSVFYELSSLVMNILRSPSAAIPSSDQPSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV
        MMRRQQQDEQSSVFYELSSLVMNILRSPSAAIPSSDQPSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV
Subjt:  MMRRQQQDEQSSVFYELSSLVMNILRSPSAAIPSSDQPSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV

Query:  VSCLSMIGRSIFCYATAPPRQDIP
        VSCLSMIGRSIFCYATAPPRQDIP
Subjt:  VSCLSMIGRSIFCYATAPPRQDIP

KAG7018435.1 hypothetical protein SDJN02_20303, partial [Cucurbita argyrosperma subsp. argyrosperma]5.3e-66100Show/hide
Query:  MMRRQQQDEQSSVFYELSSLVMNILRSPSAAIPSSDQPSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV
        MMRRQQQDEQSSVFYELSSLVMNILRSPSAAIPSSDQPSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV
Subjt:  MMRRQQQDEQSSVFYELSSLVMNILRSPSAAIPSSDQPSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV

Query:  VSCLSMIGRSIFCYATAPPRQDIPGTVVCFDEFLVNLDV
        VSCLSMIGRSIFCYATAPPRQDIPGTVVCFDEFLVNLDV
Subjt:  VSCLSMIGRSIFCYATAPPRQDIPGTVVCFDEFLVNLDV

XP_022955758.1 uncharacterized protein LOC111457656 [Cucurbita moschata]3.2e-5599.19Show/hide
Query:  MRRQQQDEQSSVFYELSSLVMNILRSPSAAIPSSDQPSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVV
        MRRQQQDEQSSVFYELSSLVMNILRSPSAAIPSSDQ SMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVV
Subjt:  MRRQQQDEQSSVFYELSSLVMNILRSPSAAIPSSDQPSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVV

Query:  SCLSMIGRSIFCYATAPPRQDIP
        SCLSMIGRSIFCYATAPPRQDIP
Subjt:  SCLSMIGRSIFCYATAPPRQDIP

XP_022979452.1 uncharacterized protein LOC111479165 [Cucurbita maxima]7.9e-5496.77Show/hide
Query:  MMRRQQQDEQSSVFYELSSLVMNILRSPSAAIPSSDQPSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV
        MMRRQQQDEQSSVFYELSSLVMNILRSP +AIPSSDQ SMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV
Subjt:  MMRRQQQDEQSSVFYELSSLVMNILRSPSAAIPSSDQPSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV

Query:  VSCLSMIGRSIFCYATAPPRQDIP
        VSCLSMIGRSIFCYATAP RQDIP
Subjt:  VSCLSMIGRSIFCYATAPPRQDIP

XP_023526129.1 uncharacterized protein LOC111789701 [Cucurbita pepo subsp. pepo]1.1e-5295.16Show/hide
Query:  MMRRQQQDEQSSVFYELSSLVMNILRSPSAAIPSSDQPSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV
        MMRRQQQDEQSSVFYELSSLVMNILRSP +AI SSDQ SMVSAVSSRRPIPMQITPAGFA LLLGISLALMLCGS+TFFIGFMMMPWVIGLVMFFYVAAV
Subjt:  MMRRQQQDEQSSVFYELSSLVMNILRSPSAAIPSSDQPSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV

Query:  VSCLSMIGRSIFCYATAPPRQDIP
        VSCLSMIGRSIFCYATAPPRQDIP
Subjt:  VSCLSMIGRSIFCYATAPPRQDIP

TrEMBL top hitse value%identityAlignment
A0A1S3BX78 uncharacterized protein LOC103494590 isoform X21.0e-4384.13Show/hide
Query:  MMRRQQQD-EQSSVFYELSSLVMNILRSPSAAIPSSDQPSMVS-AVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA
        MM+RQQ+D  +SSVFYELSSLVMNILR+P ++IP SD   +VS A SSRR IP QITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA
Subjt:  MMRRQQQD-EQSSVFYELSSLVMNILRSPSAAIPSSDQPSMVS-AVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA

Query:  AVVSCLSMIGRSIFCYATAPPRQDIP
        AVVSCLSMIGRSI CYATAPPR+DIP
Subjt:  AVVSCLSMIGRSIFCYATAPPRQDIP

A0A1S3BYH6 uncharacterized protein LOC103494590 isoform X11.6e-4484.25Show/hide
Query:  MMRRQQQD-EQSSVFYELSSLVMNILRSPSAAIPSSDQPSMVS-AVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA
        MM+RQQ+D  +SSVFYELSSLVMNILR+P ++IP SD   +VS A SSRR IP QITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA
Subjt:  MMRRQQQD-EQSSVFYELSSLVMNILRSPSAAIPSSDQPSMVS-AVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA

Query:  AVVSCLSMIGRSIFCYATAPPRQDIPG
        AVVSCLSMIGRSI CYATAPPR+DIPG
Subjt:  AVVSCLSMIGRSIFCYATAPPRQDIPG

A0A5A7TRR9 Uncharacterized protein1.6e-4484.25Show/hide
Query:  MMRRQQQD-EQSSVFYELSSLVMNILRSPSAAIPSSDQPSMVS-AVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA
        MM+RQQ+D  +SSVFYELSSLVMNILR+P ++IP SD   +VS A SSRR IP QITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA
Subjt:  MMRRQQQD-EQSSVFYELSSLVMNILRSPSAAIPSSDQPSMVS-AVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA

Query:  AVVSCLSMIGRSIFCYATAPPRQDIPG
        AVVSCLSMIGRSI CYATAPPR+DIPG
Subjt:  AVVSCLSMIGRSIFCYATAPPRQDIPG

A0A6J1GUW1 uncharacterized protein LOC1114576561.5e-5599.19Show/hide
Query:  MRRQQQDEQSSVFYELSSLVMNILRSPSAAIPSSDQPSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVV
        MRRQQQDEQSSVFYELSSLVMNILRSPSAAIPSSDQ SMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVV
Subjt:  MRRQQQDEQSSVFYELSSLVMNILRSPSAAIPSSDQPSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVV

Query:  SCLSMIGRSIFCYATAPPRQDIP
        SCLSMIGRSIFCYATAPPRQDIP
Subjt:  SCLSMIGRSIFCYATAPPRQDIP

A0A6J1INR6 uncharacterized protein LOC1114791653.8e-5496.77Show/hide
Query:  MMRRQQQDEQSSVFYELSSLVMNILRSPSAAIPSSDQPSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV
        MMRRQQQDEQSSVFYELSSLVMNILRSP +AIPSSDQ SMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV
Subjt:  MMRRQQQDEQSSVFYELSSLVMNILRSPSAAIPSSDQPSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV

Query:  VSCLSMIGRSIFCYATAPPRQDIP
        VSCLSMIGRSIFCYATAP RQDIP
Subjt:  VSCLSMIGRSIFCYATAPPRQDIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27290.1 unknown protein2.2e-3056.59Show/hide
Query:  MMRRQQQDEQSSVFYELSSLVMNILRSPSAAIPSSDQ----------PSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIG
        MMRRQ+ ++QS VFY+LSSLV+N+LRSP   I   D           P      SS  P    I+P+GFASLLLGIS+ALMLCGSVTFFIGF++MPWV+ 
Subjt:  MMRRQQQDEQSSVFYELSSLVMNILRSPSAAIPSSDQ----------PSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIG

Query:  LVMFFYVAAVVSCLSMIGRSIFCYATAPP
        L++ FYVA +VS +SM+GRSI CY   PP
Subjt:  LVMFFYVAAVVSCLSMIGRSIFCYATAPP

AT1G27290.2 unknown protein2.2e-3056.59Show/hide
Query:  MMRRQQQDEQSSVFYELSSLVMNILRSPSAAIPSSDQ----------PSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIG
        MMRRQ+ ++QS VFY+LSSLV+N+LRSP   I   D           P      SS  P    I+P+GFASLLLGIS+ALMLCGSVTFFIGF++MPWV+ 
Subjt:  MMRRQQQDEQSSVFYELSSLVMNILRSPSAAIPSSDQ----------PSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIG

Query:  LVMFFYVAAVVSCLSMIGRSIFCYATAPP
        L++ FYVA +VS +SM+GRSI CY   PP
Subjt:  LVMFFYVAAVVSCLSMIGRSIFCYATAPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCGACGGCAGCAGCAAGATGAGCAATCGAGTGTTTTCTACGAGCTTTCTTCTCTTGTTATGAATATCCTCCGATCGCCCTCGGCGGCGATTCCGTCTTCCGATCA
GCCGTCGATGGTTTCAGCCGTGTCGTCGCGGCGGCCGATTCCGATGCAGATAACCCCGGCGGGGTTTGCGTCGCTACTTCTAGGGATTTCTTTGGCTCTAATGCTCTGTG
GATCGGTTACGTTCTTCATCGGCTTTATGATGATGCCTTGGGTTATTGGATTGGTTATGTTTTTCTATGTTGCTGCTGTGGTTTCGTGCCTCTCCATGATCGGACGCTCG
ATTTTCTGCTACGCTACGGCTCCGCCTAGACAGGATATTCCAGGTACGGTGGTTTGTTTTGATGAGTTTCTTGTGAATCTGGATGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGCGACGGCAGCAGCAAGATGAGCAATCGAGTGTTTTCTACGAGCTTTCTTCTCTTGTTATGAATATCCTCCGATCGCCCTCGGCGGCGATTCCGTCTTCCGATCA
GCCGTCGATGGTTTCAGCCGTGTCGTCGCGGCGGCCGATTCCGATGCAGATAACCCCGGCGGGGTTTGCGTCGCTACTTCTAGGGATTTCTTTGGCTCTAATGCTCTGTG
GATCGGTTACGTTCTTCATCGGCTTTATGATGATGCCTTGGGTTATTGGATTGGTTATGTTTTTCTATGTTGCTGCTGTGGTTTCGTGCCTCTCCATGATCGGACGCTCG
ATTTTCTGCTACGCTACGGCTCCGCCTAGACAGGATATTCCAGGTACGGTGGTTTGTTTTGATGAGTTTCTTGTGAATCTGGATGTCTAA
Protein sequenceShow/hide protein sequence
MMRRQQQDEQSSVFYELSSLVMNILRSPSAAIPSSDQPSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVVSCLSMIGRS
IFCYATAPPRQDIPGTVVCFDEFLVNLDV