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Carg06590 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06590
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionL51_S25_CI-B8 domain-containing protein
Genome locationCarg_Chr14:10901513..10903074
RNA-Seq ExpressionCarg06590
SyntenyCarg06590
Gene Ontology termsGO:0032543 - mitochondrial translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR036249 - Thioredoxin-like superfamily
IPR039927 - 39S ribosomal protein L43/54S ribosomal protein L51


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018439.1 hypothetical protein SDJN02_20307, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-60100Show/hide
Query:  FLLLNPLSFTFSHPLHSITSRRRRRTLSCHSLSLPRVTNLCSPETQWFAVGAIAPPPLVFQIPKMAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPT
        FLLLNPLSFTFSHPLHSITSRRRRRTLSCHSLSLPRVTNLCSPETQWFAVGAIAPPPLVFQIPKMAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPT
Subjt:  FLLLNPLSFTFSHPLHSITSRRRRRTLSCHSLSLPRVTNLCSPETQWFAVGAIAPPPLVFQIPKMAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPT

Query:  FKEKNPQLQIKAVIIG
        FKEKNPQLQIKAVIIG
Subjt:  FKEKNPQLQIKAVIIG
KAG8481330.1 hypothetical protein CXB51_026272 [Gossypium anomalum]1.9e-1680.77Show/hide
Query:  KMAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPTFKEKNPQLQIKAVII
        +MA +GVWQLKKLIVSYCDWGGSSRGIRAFM+SELPTFKEKNPQL++   +I
Subjt:  KMAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPTFKEKNPQLQIKAVII
TYH49572.1 hypothetical protein ES332_D10G146400v1 [Gossypium tomentosum]6.4e-1784.31Show/hide
Query:  MAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPTFKEKNPQLQIKAVII
        MAF+GVWQLKKLIVSYCDWGGSSRGIRAFM+SELPTFKEKNPQL++   +I
Subjt:  MAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPTFKEKNPQLQIKAVII
XP_016699056.1 54S ribosomal protein L51, mitochondrial-like [Gossypium hirsutum]3.2e-1682.35Show/hide
Query:  MAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPTFKEKNPQLQIKAVII
        MA +GVWQLKKLIVSYCDWGGSSRGIRAFM+SELPTFKEKNPQL++   +I
Subjt:  MAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPTFKEKNPQLQIKAVII
XP_022979453.1 54S ribosomal protein L51, mitochondrial-like [Cucurbita maxima]3.2e-1684.31Show/hide
Query:  MAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPTFKEKNPQLQIKAVII
        MA +GVWQLKKLIVSYCDWGGSSRGIRAFMDSELP F+EKNPQLQI   +I
Subjt:  MAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPTFKEKNPQLQIKAVII
TrEMBL top hitse value%identityAlignment
A0A1U8IMF4 54S ribosomal protein L51, mitochondrial-like isoform X21.5e-1682.35Show/hide
Query:  MAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPTFKEKNPQLQIKAVII
        MA +GVWQLKKLIVSYCDWGGSSRGIRAFM+SELPTFKEKNPQL++   +I
Subjt:  MAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPTFKEKNPQLQIKAVII
A0A1U8K992 54S ribosomal protein L51, mitochondrial-like1.5e-1682.35Show/hide
Query:  MAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPTFKEKNPQLQIKAVII
        MA +GVWQLKKLIVSYCDWGGSSRGIRAFM+SELPTFKEKNPQL++   +I
Subjt:  MAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPTFKEKNPQLQIKAVII
A0A5D2AYQ2 L51_S25_CI-B8 domain-containing protein1.5e-1682.35Show/hide
Query:  MAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPTFKEKNPQLQIKAVII
        MA +GVWQLKKLIVSYCDWGGSSRGIRAFM+SELPTFKEKNPQL++   +I
Subjt:  MAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPTFKEKNPQLQIKAVII
A0A5D2F1M4 L51_S25_CI-B8 domain-containing protein1.5e-1682.35Show/hide
Query:  MAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPTFKEKNPQLQIKAVII
        MA +GVWQLKKLIVSYCDWGGSSRGIRAFM+SELPTFKEKNPQL++   +I
Subjt:  MAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPTFKEKNPQLQIKAVII
A0A5D2J6A4 L51_S25_CI-B8 domain-containing protein3.1e-1784.31Show/hide
Query:  MAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPTFKEKNPQLQIKAVII
        MAF+GVWQLKKLIVSYCDWGGSSRGIRAFM+SELPTFKEKNPQL++   +I
Subjt:  MAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPTFKEKNPQLQIKAVII
SwissProt top hitse value%identityAlignment
Q758S3 54S ribosomal protein L51, mitochondrial7.6e-0544.44Show/hide
Query:  VWQLKKLIVSYCDWGGSSRGIRAFMDSE-LPTFKEKNPQLQIKAV
        ++  KK+ + YC+WGGSS+G+R F+ S+ L  + EK PQ+Q + V
Subjt:  VWQLKKLIVSYCDWGGSSRGIRAFMDSE-LPTFKEKNPQLQIKAV
Arabidopsis top hitse value%identityAlignment
AT3G59650.1 mitochondrial ribosomal protein L51/S25/CI-B8 family protein4.7e-1880.43Show/hide
Query:  MAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPTFKEKNPQLQI
        MA +GVWQLKKL+VSYC+WGGSSRGIRAFM+SELP  KEKNPQL++
Subjt:  MAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPTFKEKNPQLQI
AT3G59650.2 mitochondrial ribosomal protein L51/S25/CI-B8 family protein4.7e-1880.43Show/hide
Query:  MAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPTFKEKNPQLQI
        MA +GVWQLKKL+VSYC+WGGSSRGIRAFM+SELP  KEKNPQL++
Subjt:  MAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPTFKEKNPQLQI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTCTTCTTCTAAACCCCCTTTCTTTCACGTTCAGCCACCCCCTCCACTCCATTACCAGCCGCCGCCGCCGCCGCACTCTCAGCTGCCACAGTCTCAGCCTTCCGAGAGT
TACTAATCTCTGTTCCCCAGAAACCCAGTGGTTCGCCGTTGGTGCGATCGCGCCGCCGCCGCTCGTTTTCCAAATTCCGAAGATGGCTTTCCAAGGTGTATGGCAGCTTA
AGAAGCTGATTGTCAGCTATTGTGACTGGGGAGGAAGCAGCAGGGGTATCAGGGCATTTATGGACTCAGAATTGCCAACTTTTAAAGAGAAAAATCCTCAGCTACAAATA
AAAGCAGTAATCATCGGG
mRNA sequenceShow/hide mRNA sequence
TTTCTTCTTCTAAACCCCCTTTCTTTCACGTTCAGCCACCCCCTCCACTCCATTACCAGCCGCCGCCGCCGCCGCACTCTCAGCTGCCACAGTCTCAGCCTTCCGAGAGT
TACTAATCTCTGTTCCCCAGAAACCCAGTGGTTCGCCGTTGGTGCGATCGCGCCGCCGCCGCTCGTTTTCCAAATTCCGAAGATGGCTTTCCAAGGTGTATGGCAGCTTA
AGAAGCTGATTGTCAGCTATTGTGACTGGGGAGGAAGCAGCAGGGGTATCAGGGCATTTATGGACTCAGAATTGCCAACTTTTAAAGAGAAAAATCCTCAGCTACAAATA
AAAGCAGTAATCATCGGG
Protein sequenceShow/hide protein sequence
FLLLNPLSFTFSHPLHSITSRRRRRTLSCHSLSLPRVTNLCSPETQWFAVGAIAPPPLVFQIPKMAFQGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPTFKEKNPQLQI
KAVIIG