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Carg06621 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06621
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionWD_REPEATS_REGION domain-containing protein
Genome locationCarg_Chr18:280129..286359
RNA-Seq ExpressionCarg06621
SyntenyCarg06621
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012142.1 hypothetical protein SDJN02_24894, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-211100Show/hide
Query:  MYEPSSWIVRPDSDGRPASGRHRYCVSLRRIDEIILRRIPGHIEIPKSSADDEEIVPMDMNWMILHIQKTCPLKHDFQICPVCNFQNPSSKFCVHVVRQW
        MYEPSSWIVRPDSDGRPASGRHRYCVSLRRIDEIILRRIPGHIEIPKSSADDEEIVPMDMNWMILHIQKTCPLKHDFQICPVCNFQNPSSKFCVHVVRQW
Subjt:  MYEPSSWIVRPDSDGRPASGRHRYCVSLRRIDEIILRRIPGHIEIPKSSADDEEIVPMDMNWMILHIQKTCPLKHDFQICPVCNFQNPSSKFCVHVVRQW

Query:  VRTRVIINLRRFFWKIGRVGLSSRVPVMRFQYGQSRTNEGLIVHRSKEALPVQTLARFPRWAILKVEAYSYDNSFMNCFRNITWVHRRSKAAEFVQKCRS
        VRTRVIINLRRFFWKIGRVGLSSRVPVMRFQYGQSRTNEGLIVHRSKEALPVQTLARFPRWAILKVEAYSYDNSFMNCFRNITWVHRRSKAAEFVQKCRS
Subjt:  VRTRVIINLRRFFWKIGRVGLSSRVPVMRFQYGQSRTNEGLIVHRSKEALPVQTLARFPRWAILKVEAYSYDNSFMNCFRNITWVHRRSKAAEFVQKCRS

Query:  KRSILHFWEVFSINFHHCQCVIGYGEEKFIVECCIDDSQQRKDIEVPSSQTHSRRARLTKENRNLSFNGRRGEWVRHARYHLHELQWLALDTVHSQLEVA
        KRSILHFWEVFSINFHHCQCVIGYGEEKFIVECCIDDSQQRKDIEVPSSQTHSRRARLTKENRNLSFNGRRGEWVRHARYHLHELQWLALDTVHSQLEVA
Subjt:  KRSILHFWEVFSINFHHCQCVIGYGEEKFIVECCIDDSQQRKDIEVPSSQTHSRRARLTKENRNLSFNGRRGEWVRHARYHLHELQWLALDTVHSQLEVA

Query:  LYGPTFSPSSTPPYRKQNHHAFELKWQSNVNNHKDMRKLKFKSINTTDMCKRKK
        LYGPTFSPSSTPPYRKQNHHAFELKWQSNVNNHKDMRKLKFKSINTTDMCKRKK
Subjt:  LYGPTFSPSSTPPYRKQNHHAFELKWQSNVNNHKDMRKLKFKSINTTDMCKRKK

RZS12601.1 hypothetical protein BHM03_00044067 [Ensete ventricosum]9.1e-0630.18Show/hide
Query:  MYEPSSWIVRPDSDGRPASGRHRYCVSLRRIDEIILRRIPGHIEIPKSSADDEEIVPMDMNWMILHIQKTCPLKHDFQICPVCNFQNPSSKFCVHVVRQW
        M+EP++WIV  + D  P+SG     V + RID++ LRR    + +    ADD E V M M+ M+L   +   L+H     P     +P     + +V + 
Subjt:  MYEPSSWIVRPDSDGRPASGRHRYCVSLRRIDEIILRRIPGHIEIPKSSADDEEIVPMDMNWMILHIQKTCPLKHDFQICPVCNFQNPSSKFCVHVVRQW

Query:  VRTRVIINLRRFFWKIGRV--GLSSRVPVMRFQYGQSRTNEGLIVH-RSKEAL--PVQTLARFPRWAIL
        +   V++      W  G +   ++ RV V+  Q    R +EG  VH RS++A   P     R  R A+L
Subjt:  VRTRVIINLRRFFWKIGRV--GLSSRVPVMRFQYGQSRTNEGLIVH-RSKEAL--PVQTLARFPRWAIL

THU55106.1 hypothetical protein C4D60_Mb11t03080 [Musa balbisiana]7.7e-0530.25Show/hide
Query:  MYEPSSWIVRPDSDGRPASGRHRYCVSLRRIDEIILRRIPGHIEIPKSSADDEEIVPMDMNWMILHIQKTCPLKHDFQICPVCNFQNPSSKFCVHVVRQW
        M+EP++WIV  + D  P+SG    CV + R+D++ LRR    + +    ADD E V M M+ ++L     C L+H     P     +P     + VV + 
Subjt:  MYEPSSWIVRPDSDGRPASGRHRYCVSLRRIDEIILRRIPGHIEIPKSSADDEEIVPMDMNWMILHIQKTCPLKHDFQICPVCNFQNPSSKFCVHVVRQW

Query:  VRTRVIINLRRFFWKIGRV
        +   V++      W  G V
Subjt:  VRTRVIINLRRFFWKIGRV

TrEMBL top hitse value%identityAlignment
A0A0A0LT31 Uncharacterized protein9.8e-2265.48Show/hide
Query:  MRFQYGQSRTNEGLIVHRSKEALPVQTLARFPRWAILKVEAYSYDNSFMNCFRNITWVHRRSKAAEFVQKCRSKRSILHFWEVF
        M FQYG+ R+NEGLIVHRS+++L VQTLA FPRWAIL++EAY  ++SF+NCFRNIT V  R KA EF  KC  K  ILH  EVF
Subjt:  MRFQYGQSRTNEGLIVHRSKEALPVQTLARFPRWAILKVEAYSYDNSFMNCFRNITWVHRRSKAAEFVQKCRSKRSILHFWEVF

A0A0A9KGA8 LAC122.4e-0434.67Show/hide
Query:  MYEPSSWIVRPDSDGRPASGRHRYCVSLRRIDEIILRRIPGHIEIPKSSADDEEIVPMDMNWMILHIQKTCPLKH
        M++P +W+V  ++DG PA+G H   V+L  IDE+ L RI G +E+ +   DD E+  + +  + L  +    L H
Subjt:  MYEPSSWIVRPDSDGRPASGRHRYCVSLRRIDEIILRRIPGHIEIPKSSADDEEIVPMDMNWMILHIQKTCPLKH

A0A4V4H588 WD_REPEATS_REGION domain-containing protein3.7e-0530.25Show/hide
Query:  MYEPSSWIVRPDSDGRPASGRHRYCVSLRRIDEIILRRIPGHIEIPKSSADDEEIVPMDMNWMILHIQKTCPLKHDFQICPVCNFQNPSSKFCVHVVRQW
        M+EP++WIV  + D  P+SG    CV + R+D++ LRR    + +    ADD E V M M+ ++L     C L+H     P     +P     + VV + 
Subjt:  MYEPSSWIVRPDSDGRPASGRHRYCVSLRRIDEIILRRIPGHIEIPKSSADDEEIVPMDMNWMILHIQKTCPLKHDFQICPVCNFQNPSSKFCVHVVRQW

Query:  VRTRVIINLRRFFWKIGRV
        +   V++      W  G V
Subjt:  VRTRVIINLRRFFWKIGRV

A0A7C8ZEL7 Uncharacterized protein1.4e-0429.41Show/hide
Query:  MYEPSSWIVRPDSDGRPASGRHRYCVSLRRIDEIILRRIPGHIEIPKSSADDEEIVPMDMNWMILHIQ
        +++P  W+V P+ +  P++ R   C+ LRR+ ++IL R+   +++  + ++ +E+VPM +  + LH Q
Subjt:  MYEPSSWIVRPDSDGRPASGRHRYCVSLRRIDEIILRRIPGHIEIPKSSADDEEIVPMDMNWMILHIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGAACCAAGCTCCTGGATTGTTCGCCCTGATTCTGATGGCCGCCCAGCCTCCGGTCGACACCGCTACTGTGTTTCTCTCCGGCGGATCGACGAGATTATACTTCG
CCGGATCCCTGGCCACATTGAAATTCCCAAATCCTCTGCCGACGACGAAGAAATTGTGCCCATGGACATGAATTGGATGATTCTCCACATTCAAAAAACTTGTCCCCTGA
AACACGATTTCCAAATCTGTCCCGTATGCAACTTCCAAAACCCTAGTTCCAAATTTTGCGTTCATGTTGTTCGTCAATGGGTTCGCACCCGTGTAATCATAAATCTTCGG
AGGTTTTTCTGGAAAATCGGAAGAGTAGGTCTTAGTAGCCGTGTTCCTGTAATGAGATTCCAATATGGACAAAGCCGGACGAACGAAGGATTGATTGTTCATAGAAGCAA
AGAAGCTCTTCCCGTTCAAACCCTGGCAAGATTTCCCAGATGGGCAATCTTGAAGGTTGAGGCTTATAGTTATGACAACTCTTTTATGAACTGTTTTAGGAACATTACAT
GGGTACATAGGAGATCCAAGGCTGCGGAGTTTGTTCAAAAATGCCGTAGCAAACGCAGTATCCTTCATTTCTGGGAGGTTTTCAGCATCAACTTCCACCACTGTCAATGT
GTGATTGGCTATGGCGAAGAAAAGTTCATTGTTGAGTGCTGCATTGATGACTCTCAGCAGAGGAAGGATATAGAGGTCCCGTCATCCCAAACTCACTCAAGACGAGCGAG
ACTTACCAAAGAGAATAGGAATCTCAGCTTCAATGGGAGAAGAGGAGAATGGGTAAGGCATGCGAGGTATCACCTTCATGAACTGCAATGGTTGGCCCTGGATACTGTCC
ATTCACAGTTAGAAGTTGCTTTGTATGGCCCAACCTTCTCACCTTCTTCCACTCCACCTTATAGGAAACAAAATCATCACGCTTTTGAGTTGAAATGGCAGAGTAATGTC
AATAACCACAAGGATATGCGCAAACTGAAGTTTAAATCGATCAACACCACTGACATGTGCAAGAGGAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTATGAACCAAGCTCCTGGATTGTTCGCCCTGATTCTGATGGCCGCCCAGCCTCCGGTCGACACCGCTACTGTGTTTCTCTCCGGCGGATCGACGAGATTATACTTCG
CCGGATCCCTGGCCACATTGAAATTCCCAAATCCTCTGCCGACGACGAAGAAATTGTGCCCATGGACATGAATTGGATGATTCTCCACATTCAAAAAACTTGTCCCCTGA
AACACGATTTCCAAATCTGTCCCGTATGCAACTTCCAAAACCCTAGTTCCAAATTTTGCGTTCATGTTGTTCGTCAATGGGTTCGCACCCGTGTAATCATAAATCTTCGG
AGGTTTTTCTGGAAAATCGGAAGAGTAGGTCTTAGTAGCCGTGTTCCTGTAATGAGATTCCAATATGGACAAAGCCGGACGAACGAAGGATTGATTGTTCATAGAAGCAA
AGAAGCTCTTCCCGTTCAAACCCTGGCAAGATTTCCCAGATGGGCAATCTTGAAGGTTGAGGCTTATAGTTATGACAACTCTTTTATGAACTGTTTTAGGAACATTACAT
GGGTACATAGGAGATCCAAGGCTGCGGAGTTTGTTCAAAAATGCCGTAGCAAACGCAGTATCCTTCATTTCTGGGAGGTTTTCAGCATCAACTTCCACCACTGTCAATGT
GTGATTGGCTATGGCGAAGAAAAGTTCATTGTTGAGTGCTGCATTGATGACTCTCAGCAGAGGAAGGATATAGAGGTCCCGTCATCCCAAACTCACTCAAGACGAGCGAG
ACTTACCAAAGAGAATAGGAATCTCAGCTTCAATGGGAGAAGAGGAGAATGGGTAAGGCATGCGAGGTATCACCTTCATGAACTGCAATGGTTGGCCCTGGATACTGTCC
ATTCACAGTTAGAAGTTGCTTTGTATGGCCCAACCTTCTCACCTTCTTCCACTCCACCTTATAGGAAACAAAATCATCACGCTTTTGAGTTGAAATGGCAGAGTAATGTC
AATAACCACAAGGATATGCGCAAACTGAAGTTTAAATCGATCAACACCACTGACATGTGCAAGAGGAAGAAATGA
Protein sequenceShow/hide protein sequence
MYEPSSWIVRPDSDGRPASGRHRYCVSLRRIDEIILRRIPGHIEIPKSSADDEEIVPMDMNWMILHIQKTCPLKHDFQICPVCNFQNPSSKFCVHVVRQWVRTRVIINLR
RFFWKIGRVGLSSRVPVMRFQYGQSRTNEGLIVHRSKEALPVQTLARFPRWAILKVEAYSYDNSFMNCFRNITWVHRRSKAAEFVQKCRSKRSILHFWEVFSINFHHCQC
VIGYGEEKFIVECCIDDSQQRKDIEVPSSQTHSRRARLTKENRNLSFNGRRGEWVRHARYHLHELQWLALDTVHSQLEVALYGPTFSPSSTPPYRKQNHHAFELKWQSNV
NNHKDMRKLKFKSINTTDMCKRKK