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Carg06630 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06630
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAuxin efflux carrier component
Genome locationCarg_Chr18:331080..332304
RNA-Seq ExpressionCarg06630
SyntenyCarg06630
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0060918 - auxin transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6430972.1 hypothetical protein SASPL_109046 [Salvia splendens]2.5e-0542.55Show/hide
Query:  AALPQGIVPFVFAKEYNSY----------LWNVNRFAYHACLLHFAGDLRLPWKPRSAMAASAMGDHFKSFKALGEKILTG---KKIKEKKKEE
        A+LPQGIVPFVFAKEYN +          +W+VN  ++H+CLLHFAG L++     +A    A     K  +    KIL     KK  +KKK+E
Subjt:  AALPQGIVPFVFAKEYNSY----------LWNVNRFAYHACLLHFAGDLRLPWKPRSAMAASAMGDHFKSFKALGEKILTG---KKIKEKKKEE
KAG7012151.1 hypothetical protein SDJN02_24903, partial [Cucurbita argyrosperma subsp. argyrosperma]6.2e-57100Show/hide
Query:  MVAFWHGLRTSIAKTAALPQGIVPFVFAKEYNSYLWNVNRFAYHACLLHFAGDLRLPWKPRSAMAASAMGDHFKSFKALGEKILTGKKIKEKKKEERFEG
        MVAFWHGLRTSIAKTAALPQGIVPFVFAKEYNSYLWNVNRFAYHACLLHFAGDLRLPWKPRSAMAASAMGDHFKSFKALGEKILTGKKIKEKKKEERFEG
Subjt:  MVAFWHGLRTSIAKTAALPQGIVPFVFAKEYNSYLWNVNRFAYHACLLHFAGDLRLPWKPRSAMAASAMGDHFKSFKALGEKILTGKKIKEKKKEERFEG

Query:  NGENSSKKRGKNRL
        NGENSSKKRGKNRL
Subjt:  NGENSSKKRGKNRL
RVW21396.1 Auxin efflux carrier component 1a [Vitis vinifera]5.0e-0653.57Show/hide
Query:  LRTSIAKTAALPQGIVPFVFAKEYN--------SYLWNVNRFAYHACLLHFAGDLR
        LR +I + AALPQGIVPFVFAKEYN         ++W+VN  A++ CLLHF G+++
Subjt:  LRTSIAKTAALPQGIVPFVFAKEYN--------SYLWNVNRFAYHACLLHFAGDLR
RXH77229.1 hypothetical protein DVH24_023503 [Malus domestica]3.7e-0975Show/hide
Query:  AALPQGIVPFVFAKEYNSYLWNVNRFAYHACLLHFAGDLR
        AALPQGIVPFVFAKEYN Y+WNV+  A+HACLLHF G ++
Subjt:  AALPQGIVPFVFAKEYNSYLWNVNRFAYHACLLHFAGDLR
XP_024628438.1 probable auxin efflux carrier component 1c isoform X2 [Medicago truncatula]2.7e-0464.1Show/hide
Query:  AALPQGIVPFVFAKEYNSYLWNVNRFAYHACLLHFAGDL
        AALPQGIVPFVFAKEYN   W+V+  A++A LLH  G +
Subjt:  AALPQGIVPFVFAKEYNSYLWNVNRFAYHACLLHFAGDL
TrEMBL top hitse value%identityAlignment
A0A396GS05 Auxin efflux carrier component1.3e-0464.1Show/hide
Query:  AALPQGIVPFVFAKEYNSYLWNVNRFAYHACLLHFAGDL
        AALPQGIVPFVFAKEYN   W+V+  A++A LLH  G +
Subjt:  AALPQGIVPFVFAKEYNSYLWNVNRFAYHACLLHFAGDL
A0A438CDZ1 Auxin efflux carrier component2.4e-0653.57Show/hide
Query:  LRTSIAKTAALPQGIVPFVFAKEYN--------SYLWNVNRFAYHACLLHFAGDLR
        LR +I + AALPQGIVPFVFAKEYN         ++W+VN  A++ CLLHF G+++
Subjt:  LRTSIAKTAALPQGIVPFVFAKEYN--------SYLWNVNRFAYHACLLHFAGDLR
A0A438J7D3 Auxin efflux carrier component2.3e-0450Show/hide
Query:  AALPQGIVPFVFAKEYN---------------SYLWNVNRFAYHACLLHFAGDLRL
        AALPQGIVPFVFAKEYN                Y+W+ N F ++A LLH AG L++
Subjt:  AALPQGIVPFVFAKEYN---------------SYLWNVNRFAYHACLLHFAGDLRL
A0A498I2V7 Auxin efflux carrier component1.8e-0975Show/hide
Query:  AALPQGIVPFVFAKEYNSYLWNVNRFAYHACLLHFAGDLR
        AALPQGIVPFVFAKEYN Y+WNV+  A+HACLLHF G ++
Subjt:  AALPQGIVPFVFAKEYNSYLWNVNRFAYHACLLHFAGDLR
A0A4D9BL89 Auxin efflux carrier component1.2e-0542.55Show/hide
Query:  AALPQGIVPFVFAKEYNSY----------LWNVNRFAYHACLLHFAGDLRLPWKPRSAMAASAMGDHFKSFKALGEKILTG---KKIKEKKKEE
        A+LPQGIVPFVFAKEYN +          +W+VN  ++H+CLLHFAG L++     +A    A     K  +    KIL     KK  +KKK+E
Subjt:  AALPQGIVPFVFAKEYNSY----------LWNVNRFAYHACLLHFAGDLRLPWKPRSAMAASAMGDHFKSFKALGEKILTG---KKIKEKKKEE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01420.1 Auxin efflux carrier family protein8.5e-0475.86Show/hide
Query:  HG--LRTSIAKTAALPQGIVPFVFAKEYN
        HG  LR +I + AALPQGIVPFVFAKEYN
Subjt:  HG--LRTSIAKTAALPQGIVPFVFAKEYN
AT2G01420.2 Auxin efflux carrier family protein8.5e-0475.86Show/hide
Query:  HG--LRTSIAKTAALPQGIVPFVFAKEYN
        HG  LR +I + AALPQGIVPFVFAKEYN
Subjt:  HG--LRTSIAKTAALPQGIVPFVFAKEYN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGCTTTTTGGCATGGTTTAAGAACGTCCATAGCAAAGACAGCAGCTCTCCCACAAGGAATTGTCCCCTTTGTCTTTGCGAAGGAGTACAACAGTTATCTTTGGAA
TGTTAATCGCTTTGCCTATCACGCTTGTTTACTACATTTTGCTGGGGATTTGAGGCTGCCATGGAAGCCAAGGTCAGCCATGGCTGCGTCCGCCATGGGAGACCATTTCA
AAAGCTTCAAAGCTTTGGGAGAGAAGATTTTAACAGGGAAAAAGATAAAGGAGAAGAAGAAAGAGGAGAGATTTGAGGGAAATGGGGAAAATTCTTCCAAGAAAAGGGGA
AAAAACAGGCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGCTTTTTGGCATGGTTTAAGAACGTCCATAGCAAAGACAGCAGCTCTCCCACAAGGAATTGTCCCCTTTGTCTTTGCGAAGGAGTACAACAGTTATCTTTGGAA
TGTTAATCGCTTTGCCTATCACGCTTGTTTACTACATTTTGCTGGGGATTTGAGGCTGCCATGGAAGCCAAGGTCAGCCATGGCTGCGTCCGCCATGGGAGACCATTTCA
AAAGCTTCAAAGCTTTGGGAGAGAAGATTTTAACAGGGAAAAAGATAAAGGAGAAGAAGAAAGAGGAGAGATTTGAGGGAAATGGGGAAAATTCTTCCAAGAAAAGGGGA
AAAAACAGGCTGTAAAATCATTATGTTTGGTAGTCAATTATATAAGAAAAAAAATGTTTTGGTTTTTTT
Protein sequenceShow/hide protein sequence
MVAFWHGLRTSIAKTAALPQGIVPFVFAKEYNSYLWNVNRFAYHACLLHFAGDLRLPWKPRSAMAASAMGDHFKSFKALGEKILTGKKIKEKKKEERFEGNGENSSKKRG
KNRL