CuGenDBv2

Gene ID	Carg06641
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Endoplasmic reticulum transmembrane protein
Genome location	Carg_Chr18:397109..400333
RNA-Seq Expression	Carg06641
Synteny	Carg06641
Gene Ontology terms	GO:0006886 - intracellular protein transport (biological process) GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process) GO:0070973 - protein localization to endoplasmic reticulum exit site (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR008417 - B-cell receptor-associated protein 29/31 IPR040463 - BAP29/BAP31, transmembrane domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6572980.1 UV-B-induced protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

2.6e-59

100

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Query:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC
        MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC
Subjt:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC

Query:  LLYWCIYRICKYNQEIERLEE
        LLYWCIYRICKYNQEIERLEE
Subjt:  LLYWCIYRICKYNQEIERLEE

XP_008466920.1 PREDICTED: uncharacterized protein LOC103504239 [Cucumis melo]

4.1e-57

89.92

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Query:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC
        MALQW+LLAYTVAVE A+AILLT+PSPKLLKKR VSLISLILQPALFVVPFAGFQILDIYWKNEHRL CTSEICTA+ERDRYEK+ YKAQRNVILCV AC
Subjt:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC

Query:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ
        LLYWCIYR+CKYN+EIE LEEVEKRYKEQ
Subjt:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ

XP_022955053.1 uncharacterized protein LOC111457130 [Cucurbita moschata]

1.7e-63

100

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Query:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC
        MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC
Subjt:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC

Query:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ
        LLYWCIYRICKYNQEIERLEEVEKRYKEQ
Subjt:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ

XP_022994132.1 uncharacterized protein LOC111489960 [Cucurbita maxima]

5.6e-62

97.67

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Query:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC
        MALQWVLLAYTVAVE AVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRL CTSEICTA+ERDRYEKTNYKAQRNVILCVCAC
Subjt:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC

Query:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ
        LLYWCIYRICKYNQEIERLEEVEKRYKEQ
Subjt:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ

XP_023541197.1 uncharacterized protein LOC111801431 [Cucurbita pepo subsp. pepo]

8.6e-63

99.22

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Query:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC
        MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRL CTSEICTASERDRYEKTNYKAQRNVILCVCAC
Subjt:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC

Query:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ
        LLYWCIYRICKYNQEIERLEEVEKRYKEQ
Subjt:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CSB5 Endoplasmic reticulum transmembrane protein

2.0e-57

89.92

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Query:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC
        MALQW+LLAYTVAVE A+AILLT+PSPKLLKKR VSLISLILQPALFVVPFAGFQILDIYWKNEHRL CTSEICTA+ERDRYEK+ YKAQRNVILCV AC
Subjt:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC

Query:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ
        LLYWCIYR+CKYN+EIE LEEVEKRYKEQ
Subjt:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ

A0A6J1E863 Endoplasmic reticulum transmembrane protein

4.5e-57

89.15

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Query:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC
        MALQW+LLAYTVAVE A+AILLTIPSPKLLK+R VSLISLILQPALFVVPFAGFQILDIYWKNEHRL CTSEICTA+ERDRYEK+ +KAQRNVILCVCAC
Subjt:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC

Query:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ
        LLYWCIYRICKYN++IE LEEVEKRYK+Q
Subjt:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ

A0A6J1GSV9 Endoplasmic reticulum transmembrane protein

8.4e-64

100

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Query:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC
        MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC
Subjt:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC

Query:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ
        LLYWCIYRICKYNQEIERLEEVEKRYKEQ
Subjt:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ

A0A6J1JUV5 Endoplasmic reticulum transmembrane protein

2.7e-62

97.67

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Query:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC
        MALQWVLLAYTVAVE AVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRL CTSEICTA+ERDRYEKTNYKAQRNVILCVCAC
Subjt:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC

Query:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ
        LLYWCIYRICKYNQEIERLEEVEKRYKEQ
Subjt:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ

A0A6J1KNQ5 Endoplasmic reticulum transmembrane protein

4.5e-57

89.15

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Query:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC
        MALQW+LLAYTVAVE A+AILLTIPSPKLLK+R VSLISLILQPALFVVPFAGFQILDIYWKNEHRL CTSEICTA+ERDRYEK+ +KAQRNVILCVCAC
Subjt:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC

Query:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ
        LLYWCIYRICKYN++IE LEEVEKRYK+Q
Subjt:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G48440.1 B-cell receptor-associated 31-like

4.4e-49

69.77

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Query:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC
        MALQW++L+Y VAVEV + ++LT+P P LLKKR+V L+SLILQPA  +V FAGFQ+LDIYWK EHRL C+SE+CTA+ERDRYEK+ YKAQRNV+LC    
Subjt:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC

Query:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ
        LLYWCIYRICKYN+++ERLE  EKR+KE+
Subjt:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ

AT3G03160.1 FUNCTIONS IN: molecular_function unknown

4.8e-19

37.98

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Query:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC
        MAL+WV+L Y  A E  + +LLT+P    L+K +V++   +L+P L +VPF  F ++DIYWK E    C  + CT SE  R++K+  K+QRN +L   A 
Subjt:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC

Query:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ
        + YW +Y +     +IE L +  +R + +
Subjt:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ

AT3G17780.1 FUNCTIONS IN: molecular_function unknown

2.9e-48

68.99

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Query:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC
        MALQW++L+Y VA EVA+A++LT+P P LLKKRIVSLISLIL PA  +V FAGFQ+LDIYWKNEHRL C+SE+CT +ERDR+EK+ YKAQRN +LC    
Subjt:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC

Query:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ
        LLYWCI+RICKY++++ERLE++EKRYK++
Subjt:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ

AT5G17190.1 FUNCTIONS IN: molecular_function unknown

2.5e-20

39.53

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Query:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC
        MAL+WV+L Y  A E  + ILLT+P    L+K +V++   +L+P L ++PF  F ++DIYWK E R  C  + CT SE  R++K+  K+QRN +L   A 
Subjt:  MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCAC

Query:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ
        + YW +Y +      IE+L +  +R K +
Subjt:  LLYWCIYRICKYNQEIERLEEVEKRYKEQ

Sequences

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CDS sequence

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ATGGCGTTGCAGTGGGTGCTATTGGCTTATACGGTGGCGGTGGAGGTTGCCGTCGCCATTCTGCTGACGATTCCTTCACCCAAGCTGCTCAAGAAACGCATCGTCTCTCT
GATTTCACTCATTCTTCAACCTGCACTCTTCGTCGTGCCCTTCGCCGGCTTTCAGATTCTAGATATATACTGGAAGAATGAGCATCGGTTGAAGTGCACATCTGAGATAT
GCACTGCTTCTGAGAGAGATCGATATGAGAAAACCAACTATAAAGCTCAGAGGAACGTGATTCTATGTGTTTGTGCATGCCTCCTCTACTGGTGTATCTATCGCATTTGC
AAGTATAACCAAGAGATTGAAAGATTGGAGGAGGTAGAAAAGAGATACAAAGAGCAGTAG

mRNA sequence

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AAAGGAAAAAGAAAATTGGACCGAGGGAGAAGAAAGAGGGCGTCGAAGACAAAGAGAAGAAGCAAAAGAAGGGCATTTGATCGAAAATGGCGTTGCAGTGGGTGCTATTG
GCTTATACGGTGGCGGTGGAGGTTGCCGTCGCCATTCTGCTGACGATTCCTTCACCCAAGCTGCTCAAGAAACGCATCGTCTCTCTGATTTCACTCATTCTTCAACCTGC
ACTCTTCGTCGTGCCCTTCGCCGGCTTTCAGATTCTAGATATATACTGGAAGAATGAGCATCGGTTGAAGTGCACATCTGAGATATGCACTGCTTCTGAGAGAGATCGAT
ATGAGAAAACCAACTATAAAGCTCAGAGGAACGTGATTCTATGTGTTTGTGCATGCCTCCTCTACTGGTGTATCTATCGCATTTGCAAGTATAACCAAGAGATTGAAAGA
TTGGAGGAGGTAGAAAAGAGATACAAAGAGCAGTAGATTTCAGGAAGTGTGAAATCCTGTTACATGTGGTAATGGTTTTGATCATTTCAATACTTGAATCTTTGTTTGTA
CTCGAGTATGAGAATTATGACATTATTAGAACACCATAACTTTGCTGGTTTAGCTTGGTCAAGTTTTAAGCTCTATGGACAAACTTTTTTTTCTTTTTCTTTTTGCCTTT
TATTACAACTGAAAAGCGAAGGTAGATATGATTTTGTACCTCATCATAGAGTCACTGCCGTTGGATTAATGAGAATAAATCAAATTTTTAAGC

Protein sequence

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MALQWVLLAYTVAVEVAVAILLTIPSPKLLKKRIVSLISLILQPALFVVPFAGFQILDIYWKNEHRLKCTSEICTASERDRYEKTNYKAQRNVILCVCACLLYWCIYRIC
KYNQEIERLEEVEKRYKEQ

Carg06641 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome