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Carg06649 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06649
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein BOLA1, chloroplastic
Genome locationCarg_Chr18:450926..451171
RNA-Seq ExpressionCarg06649
SyntenyCarg06649
Gene Ontology termsGO:0001732 - formation of cytoplasmic translation initiation complex (biological process)
GO:0005852 - eukaryotic translation initiation factor 3 complex (cellular component)
GO:0016282 - eukaryotic 43S preinitiation complex (cellular component)
GO:0033290 - eukaryotic 48S preinitiation complex (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsIPR002634 - BolA protein
IPR036065 - BolA-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012170.1 SufE-like protein 1, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]9.7e-36100Show/hide
Query:  MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL
        MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL
Subjt:  MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL

KGN64204.1 hypothetical protein Csa_014195 [Cucumis sativus]1.3e-3293.9Show/hide
Query:  MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL
        MASRGANVVLSRANRMKTKLQSALSAS+LEIEDVSHQHAGHA VKGS GETHFNVKIVSP FEGQSLVKRHRMVYDALA+EL
Subjt:  MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL

TXG51754.1 hypothetical protein EZV62_024278 [Acer yangbiense]8.8e-2981.71Show/hide
Query:  MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL
        MASRGAN ++SRA RM+TKL+S L ASVLEIEDVSHQHAGHA VKGS+GE+HFNV+IVSPNF+GQ+LVKRHRMVYDAL DEL
Subjt:  MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL

TYJ99061.1 protein BOLA1 [Cucumis melo var. makuwa]2.9e-3293.9Show/hide
Query:  MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL
        MASRGANVVLSRANRMKTKLQSALSAS LEIEDVSHQHAGHA VKGS GETHFNVKIVSP FEGQSLVKRHRMVYDALA+EL
Subjt:  MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL

XP_022994950.1 protein BOLA1, chloroplastic [Cucurbita maxima]9.7e-36100Show/hide
Query:  MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL
        MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL
Subjt:  MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL

TrEMBL top hitse value%identityAlignment
A0A0A0LT67 Uncharacterized protein6.4e-3393.9Show/hide
Query:  MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL
        MASRGANVVLSRANRMKTKLQSALSAS+LEIEDVSHQHAGHA VKGS GETHFNVKIVSP FEGQSLVKRHRMVYDALA+EL
Subjt:  MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL

A0A444YZ34 Uncharacterized protein8.0e-2881.93Show/hide
Query:  MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKG-SDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL
        MASRGA+VVLSRANR+K+KLQ+AL A+VLE++DVS+QHAGHA VKG SD ETHFNVKIVSP F+GQSLVKRHRMVYD LADEL
Subjt:  MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKG-SDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL

A0A5C7H427 Uncharacterized protein4.3e-2981.71Show/hide
Query:  MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL
        MASRGAN ++SRA RM+TKL+S L ASVLEIEDVSHQHAGHA VKGS+GE+HFNV+IVSPNF+GQ+LVKRHRMVYDAL DEL
Subjt:  MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL

A0A5D3BK08 Protein BOLA11.4e-3293.9Show/hide
Query:  MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL
        MASRGANVVLSRANRMKTKLQSALSAS LEIEDVSHQHAGHA VKGS GETHFNVKIVSP FEGQSLVKRHRMVYDALA+EL
Subjt:  MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL

A0A6J1K2R4 protein BOLA1, chloroplastic4.7e-36100Show/hide
Query:  MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL
        MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL
Subjt:  MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL

SwissProt top hitse value%identityAlignment
Q3E793 BolA-like protein 16.2e-0957.14Show/hide
Query:  SHQHAGHAGVKGS-DGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL
        SH+H GHAGV+G+   ETHF +++VS  FEG  L +RHRMVY  L DE+
Subjt:  SHQHAGHAGVKGS-DGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL

Q682I1 Protein BOLA1, chloroplastic2.5e-1861.54Show/hide
Query:  ANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKG-SDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL
        +  + +RA+RM+ KLQ  L    L IEDVS+QHAGHAG+KG +D ETHFNVKIVS  FEG +LVKRHR+VY  L +EL
Subjt:  ANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKG-SDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL

Q84W65 SufE-like protein 1, chloroplastic/mitochondrial5.0e-1960.24Show/hide
Query:  GANVVL--SRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGS---DGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL
        G+NVV   SR  R++ KL+  L    LE+EDVS+QHAGHA V+GS   DGETHFN++IVS  F+G+SLVKRHR++YD L DEL
Subjt:  GANVVL--SRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGS---DGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL

Q9D8S9 BolA-like protein 11.8e-0847.76Show/hide
Query:  MKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL
        ++ KL+ ALS  VLE+ + S  HA  AG      ETHF V +VS  FEG S ++RHR+V++AL++EL
Subjt:  MKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL

Q9Y3E2 BolA-like protein 12.3e-0846.25Show/hide
Query:  SRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL
        S G+  +      ++TKL+ ALS  VLE+ + S    GHA   GS  ETHF V +VS  FEG S ++RHR+V+ ALA+EL
Subjt:  SRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL

Arabidopsis top hitse value%identityAlignment
AT1G55805.1 BolA-like family protein1.8e-1961.54Show/hide
Query:  ANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKG-SDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL
        +  + +RA+RM+ KLQ  L    L IEDVS+QHAGHAG+KG +D ETHFNVKIVS  FEG +LVKRHR+VY  L +EL
Subjt:  ANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKG-SDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL

AT4G26500.1 chloroplast sulfur E3.6e-2060.24Show/hide
Query:  GANVVL--SRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGS---DGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL
        G+NVV   SR  R++ KL+  L    LE+EDVS+QHAGHA V+GS   DGETHFN++IVS  F+G+SLVKRHR++YD L DEL
Subjt:  GANVVL--SRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGS---DGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL

AT5G17560.1 BolA-like family protein8.0e-0437.31Show/hide
Query:  MKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL
        M+ K++  L+A  + + D+S            DG  H  + +VS  FEGQS V R RMVY A+ +EL
Subjt:  MKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCACGAGGGGCAAACGTGGTGCTCTCAAGGGCGAACAGGATGAAGACGAAGTTGCAATCAGCATTATCAGCGAGTGTTTTGGAAATCGAGGACGTTTCGCACCA
GCACGCTGGGCATGCGGGAGTTAAGGGAAGCGATGGGGAGACTCATTTCAATGTAAAGATTGTGTCACCAAATTTCGAAGGGCAGAGCCTTGTGAAGCGCCATAGAATGG
TGTATGATGCGTTGGCTGATGAGCTT
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCACGAGGGGCAAACGTGGTGCTCTCAAGGGCGAACAGGATGAAGACGAAGTTGCAATCAGCATTATCAGCGAGTGTTTTGGAAATCGAGGACGTTTCGCACCA
GCACGCTGGGCATGCGGGAGTTAAGGGAAGCGATGGGGAGACTCATTTCAATGTAAAGATTGTGTCACCAAATTTCGAAGGGCAGAGCCTTGTGAAGCGCCATAGAATGG
TGTATGATGCGTTGGCTGATGAGCTT
Protein sequenceShow/hide protein sequence
MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSPNFEGQSLVKRHRMVYDALADEL