CuGenDBv2

Gene ID	Carg06655
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DNA-binding protein RHL1-like isoform X2
Genome location	Carg_Chr18:478740..485382
RNA-Seq Expression	Carg06655
Synteny	Carg06655
Gene Ontology terms	GO:0042023 - DNA endoreduplication (biological process) GO:0003677 - DNA binding (molecular function)
InterPro domains	IPR038859 - DNA-binding protein RHL1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6572993.1 DNA-binding protein RHL1, partial [Cucurbita argyrosperma subsp. sororia]

2.1e-147

70.28

Show/hide

Query:  MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI
        MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI
Subjt:  MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI

Query:  LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI
        LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI
Subjt:  LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI

Query:  NRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVF-----------------------KYYPLH----------------------------
        NRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVF                       K   +H                            
Subjt:  NRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVF-----------------------KYYPLH----------------------------

Query:  -----------------------------ILLLFVVFAVLE----------------GFVSAQKVQLSGSKRKIDQ---------LLFEFAGGKVTRKDT
                                     IL+   + +  E                  VSAQKVQLSGSKRKIDQ         +  +  GGKVTRKDT
Subjt:  -----------------------------ILLLFVVFAVLE----------------GFVSAQKVQLSGSKRKIDQ---------LLFEFAGGKVTRKDT

Query:  EYEVEDDIEELSSSQEDTDEDWTS
        EYEVEDDIEELSSSQEDTDEDWTS
Subjt:  EYEVEDDIEELSSSQEDTDEDWTS

KAG7012176.1 DNA-binding protein RHL1 [Cucurbita argyrosperma subsp. argyrosperma]

6.2e-179

100

Show/hide

Query:  MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI
        MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI
Subjt:  MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI

Query:  LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI
        LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI
Subjt:  LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI

Query:  NRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVFKYYPLHILLLFVVFAVLEGFVSAQKVQLSGSKRKIDQLLFEFAGGKVTRKDTEYEVE
        NRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVFKYYPLHILLLFVVFAVLEGFVSAQKVQLSGSKRKIDQLLFEFAGGKVTRKDTEYEVE
Subjt:  NRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVFKYYPLHILLLFVVFAVLEGFVSAQKVQLSGSKRKIDQLLFEFAGGKVTRKDTEYEVE

Query:  DDIEELSSSQEDTDEDWTS
        DDIEELSSSQEDTDEDWTS
Subjt:  DDIEELSSSQEDTDEDWTS

XP_022955237.1 DNA-binding protein RHL1-like isoform X2 [Cucurbita moschata]

4.8e-147

70.35

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Query:  MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI
        MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI
Subjt:  MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI

Query:  LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI
        LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI
Subjt:  LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI

Query:  NRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVF------------------------KYYPLH---------------------------
        NRVE+NSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVF                        K   +H                           
Subjt:  NRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVF------------------------KYYPLH---------------------------

Query:  ------------------------------ILL---LFVVFAVLE-------------GFVSAQKVQLSGSKRKIDQ---------LLFEFAGGKVTRKD
                                      IL+   L  +F  +E               VSAQKVQLSGSKRKIDQ         +  +  GGKVTRKD
Subjt:  ------------------------------ILL---LFVVFAVLE-------------GFVSAQKVQLSGSKRKIDQ---------LLFEFAGGKVTRKD

Query:  TEYEVEDDIEELSSSQEDTDEDWTS
        TEYEVEDDIEELSSSQEDTDEDWTS
Subjt:  TEYEVEDDIEELSSSQEDTDEDWTS

XP_022994237.1 DNA-binding protein RHL1-like isoform X3 [Cucurbita maxima]

4.6e-142

68.71

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Query:  MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI
        MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQ CLCPSA VLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI
Subjt:  MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI

Query:  LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI
        LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDEN EEARLDFPKELSMV  GEYDFNGGAGVVTTIKP AQKKGI
Subjt:  LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI

Query:  NRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVF------------------------KYYPLH---------------------------
        NRVE+NSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVF                        K   +H                           
Subjt:  NRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVF------------------------KYYPLH---------------------------

Query:  ------------------------------ILL---LFVVFAVLE-------------GFVSAQKVQLSGSKRKIDQ---------LLFEFAGGKVTRKD
                                      IL+   L  +F  +E               V AQKVQLSGSKRKIDQ         +  +  GGKVTRKD
Subjt:  ------------------------------ILL---LFVVFAVLE-------------GFVSAQKVQLSGSKRKIDQ---------LLFEFAGGKVTRKD

Query:  TEYEVEDDIEELSSSQEDTDEDWTS
        TEYEVEDDIEELSSSQEDTDEDWTS
Subjt:  TEYEVEDDIEELSSSQEDTDEDWTS

XP_023542520.1 DNA-binding protein RHL1-like [Cucurbita pepo subsp. pepo]

5.8e-145

69.1

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Query:  MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI
        MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQ CLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI
Subjt:  MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI

Query:  LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI
        LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDEN+EEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI
Subjt:  LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI

Query:  NRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVFKYYPLH---------------------------------------------------
        NRVE+NSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVF +                                                       
Subjt:  NRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVFKYYPLH---------------------------------------------------

Query:  -----------------------------ILL---LFVVFAVLE-------------GFVSAQKVQLSGSKRKIDQ---------LLFEFAGGKVTRKDT
                                     IL+   L  +F  +E               VSAQKVQLSGSKRKIDQ         +  +  GG+VTRKDT
Subjt:  -----------------------------ILL---LFVVFAVLE-------------GFVSAQKVQLSGSKRKIDQ---------LLFEFAGGKVTRKDT

Query:  EYEVEDDIEELSSSQEDTDEDWTS
        EYEVED+IEELSSSQEDTDEDWTS
Subjt:  EYEVEDDIEELSSSQEDTDEDWTS

TrEMBL top hits

e value

%identity

Alignment

A0A6J1GT04 DNA-binding protein RHL1-like isoform X2

2.3e-147

70.35

Show/hide

Query:  MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI
        MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI
Subjt:  MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI

Query:  LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI
        LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI
Subjt:  LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI

Query:  NRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVF------------------------KYYPLH---------------------------
        NRVE+NSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVF                        K   +H                           
Subjt:  NRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVF------------------------KYYPLH---------------------------

Query:  ------------------------------ILL---LFVVFAVLE-------------GFVSAQKVQLSGSKRKIDQ---------LLFEFAGGKVTRKD
                                      IL+   L  +F  +E               VSAQKVQLSGSKRKIDQ         +  +  GGKVTRKD
Subjt:  ------------------------------ILL---LFVVFAVLE-------------GFVSAQKVQLSGSKRKIDQ---------LLFEFAGGKVTRKD

Query:  TEYEVEDDIEELSSSQEDTDEDWTS
        TEYEVEDDIEELSSSQEDTDEDWTS
Subjt:  TEYEVEDDIEELSSSQEDTDEDWTS

A0A6J1GT84 DNA-binding protein RHL1-like isoform X1

8.3e-137

98.78

Show/hide

Query:  MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI
        MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI
Subjt:  MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI

Query:  LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI
        LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI
Subjt:  LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI

Query:  NRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVFKY
        NRVE+NSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVF +
Subjt:  NRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVFKY

A0A6J1JV81 DNA-binding protein RHL1-like isoform X3

2.2e-142

68.71

Show/hide

Query:  MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI
        MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQ CLCPSA VLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI
Subjt:  MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI

Query:  LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI
        LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDEN EEARLDFPKELSMV  GEYDFNGGAGVVTTIKP AQKKGI
Subjt:  LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI

Query:  NRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVF------------------------KYYPLH---------------------------
        NRVE+NSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVF                        K   +H                           
Subjt:  NRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVF------------------------KYYPLH---------------------------

Query:  ------------------------------ILL---LFVVFAVLE-------------GFVSAQKVQLSGSKRKIDQ---------LLFEFAGGKVTRKD
                                      IL+   L  +F  +E               V AQKVQLSGSKRKIDQ         +  +  GGKVTRKD
Subjt:  ------------------------------ILL---LFVVFAVLE-------------GFVSAQKVQLSGSKRKIDQ---------LLFEFAGGKVTRKD

Query:  TEYEVEDDIEELSSSQEDTDEDWTS
        TEYEVEDDIEELSSSQEDTDEDWTS
Subjt:  TEYEVEDDIEELSSSQEDTDEDWTS

A0A6J1K0N2 DNA-binding protein RHL1-like isoform X1

1.6e-132

96.33

Show/hide

Query:  MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI
        MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQ CLCPSA VLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI
Subjt:  MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI

Query:  LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI
        LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDEN EEARLDFPKELSMV  GEYDFNGGAGVVTTIKP AQKKGI
Subjt:  LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI

Query:  NRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVFKY
        NRVE+NSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVF +
Subjt:  NRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVFKY

A0A6J1K2C7 DNA-binding protein RHL1-like isoform X4

6.3e-137

67.8

Show/hide

Query:  MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI
        MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQ CLCPSA VLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI
Subjt:  MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPI

Query:  LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI
        LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDEN EEARLDFPKELSMV  GEYDFNGGAGVVTTIKP AQKKGI
Subjt:  LYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGI

Query:  NRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVF------------------------KYYPLH---------------------------
        NRVE+NSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVF                        K   +H                           
Subjt:  NRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVF------------------------KYYPLH---------------------------

Query:  ------------------------------ILL---LFVVFAVLE----------GFVSAQKVQLSGSKRKIDQLLFEFAGGKVTRKDTEYEVEDDIEEL
                                      IL+   L  +F  +E             S    Q     RK   +  +  GGKVTRKDTEYEVEDDIEEL
Subjt:  ------------------------------ILL---LFVVFAVLE----------GFVSAQKVQLSGSKRKIDQLLFEFAGGKVTRKDTEYEVEDDIEEL

Query:  SSSQEDTDEDWTS
        SSSQEDTDEDWTS
Subjt:  SSSQEDTDEDWTS

SwissProt top hits

e value

%identity

Alignment

O81242 DNA-binding protein RHL1

3.6e-73

55.98

Show/hide

Query:  MARGSSSSK-TNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNP
        M R SSS K  +K   + + E   RKRLK LA  N LLS + AK    L PS  VLKH+G DI++KS RKNRFLFSF GLLAP+S   IG+L  L +KNP
Subjt:  MARGSSSSK-TNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNP

Query:  ILYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKK-
        +LYL FPQGRMKLFGTI+YPKNRYLTLQFSRGGKNV C+DYFDNMIVFS++WWIGTK+EN EEARLDFPKEL+  +  E+DF GGAG   ++K  A  + 
Subjt:  ILYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKK-

Query:  GINRVEDNSLK----------GEHGDDLVDLED--NMTTPIKTTPVRHSERSAGKVFKY
        G    E +S +          GE  DD + +     +T P++ TPVR S+R++GK F +
Subjt:  GINRVEDNSLK----------GEHGDDLVDLED--NMTTPIKTTPVRHSERSAGKVFKY

Arabidopsis top hits

e value

%identity

Alignment

AT1G48380.1 root hair initiation protein root hairless 1 (RHL1)

2.6e-74

55.98

Show/hide

Query:  MARGSSSSK-TNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNP
        M R SSS K  +K   + + E   RKRLK LA  N LLS + AK    L PS  VLKH+G DI++KS RKNRFLFSF GLLAP+S   IG+L  L +KNP
Subjt:  MARGSSSSK-TNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNP

Query:  ILYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKK-
        +LYL FPQGRMKLFGTI+YPKNRYLTLQFSRGGKNV C+DYFDNMIVFS++WWIGTK+EN EEARLDFPKEL+  +  E+DF GGAG   ++K  A  + 
Subjt:  ILYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKK-

Query:  GINRVEDNSLK----------GEHGDDLVDLED--NMTTPIKTTPVRHSERSAGKVFKY
        G    E +S +          GE  DD + +     +T P++ TPVR S+R++GK F +
Subjt:  GINRVEDNSLK----------GEHGDDLVDLED--NMTTPIKTTPVRHSERSAGKVFKY

AT1G48380.2 root hair initiation protein root hairless 1 (RHL1)

6.6e-70

50.34

Show/hide

Query:  MARGSSSSK-TNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNP
        M R SSS K  +K   + + E   RKRLK LA  N LLS + AK    L PS  VLKH+G DI++KS RKNRFLFSF GLLAP+S   IG+L  L +KNP
Subjt:  MARGSSSSK-TNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNP

Query:  ILYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMV-------------------------
        +LYL FPQGRMKLFGTI+YPKNRYLTLQFSRGGKNV C+DYFDNMIVFS++WWIGTK+EN EEARLDFPKEL+ V                         
Subjt:  ILYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMV-------------------------

Query:  ------QCGEYDFNGGAGVVTTIKPSAQKK-GINRVEDNSLK----------GEHGDDLVDLED--NMTTPIKTTPVRHSERSAGKVFKY
              +  E+DF GGAG   ++K  A  + G    E +S +          GE  DD + +     +T P++ TPVR S+R++GK F +
Subjt:  ------QCGEYDFNGGAGVVTTIKPSAQKK-GINRVEDNSLK----------GEHGDDLVDLED--NMTTPIKTTPVRHSERSAGKVFKY

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGCGCGGATCATCGTCTTCGAAGACGAACAAAGCGAACGCAGAGCTCGAACCGGAGATTGCAGCGCGAAAGCGGCTTAAGAAGCTCGCATTTTCCAATAATCTACT
TTCAGGAACTCAGGCAAAGCCCCAGGGATGTCTGTGTCCATCCGCAACCGTTCTGAAGCACAATGGCAAAGACATTGTCAAGAAATCTCACCGAAAGAACAGGTTCCTCT
TCTCGTTTTCAGGCTTGCTCGCCCCCGTCAGTGGAGGCAAGATTGGTGAGCTCAAGGATTTGGGATCCAAGAATCCAATTCTCTATCTCGAATTTCCTCAGGGACGTATG
AAGTTGTTTGGAACTATAATGTATCCGAAGAACAGATATTTGACTTTGCAGTTTTCTAGAGGAGGAAAGAATGTGACATGTGAAGATTATTTTGATAATATGATTGTCTT
TTCGGATGCATGGTGGATTGGAACAAAAGATGAAAATCAAGAGGAGGCTCGTCTCGATTTTCCGAAAGAATTGTCTATGGTACAATGTGGTGAATATGACTTTAATGGTG
GTGCTGGTGTTGTCACTACGATTAAGCCAAGTGCTCAAAAGAAGGGAATCAACCGTGTTGAAGATAATTCCCTCAAAGGAGAACATGGAGACGACTTAGTAGACCTCGAA
GACAACATGACAACTCCTATAAAGACTACACCAGTTAGACATTCCGAAAGATCTGCTGGGAAAGTATTCAAGTATTACCCGTTGCATATATTGTTACTGTTTGTGGTGTT
TGCTGTTTTGGAGGGGTTTGTTTCTGCCCAAAAGGTGCAGCTTTCTGGTTCAAAGCGAAAGATTGACCAGCTGCTCTTTGAATTTGCAGGAGGAAAAGTCACGAGGAAGG
ATACAGAATATGAGGTTGAAGATGACATTGAAGAGTTGTCGAGCTCTCAAGAGGACACTGATGAAGATTGGACAAGTTGA

mRNA sequence

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AAGAAGGCTCGAGGGATCCGAGAATAGACAGTGGTGGGTCTGCAGCCCACTGCCAGCATCAGAAATGGCGCGCGGATCATCGTCTTCGAAGACGAACAAAGCGAACGCAG
AGCTCGAACCGGAGATTGCAGCGCGAAAGCGGCTTAAGAAGCTCGCATTTTCCAATAATCTACTTTCAGGAACTCAGGCAAAGCCCCAGGGATGTCTGTGTCCATCCGCA
ACCGTTCTGAAGCACAATGGCAAAGACATTGTCAAGAAATCTCACCGAAAGAACAGGTTCCTCTTCTCGTTTTCAGGCTTGCTCGCCCCCGTCAGTGGAGGCAAGATTGG
TGAGCTCAAGGATTTGGGATCCAAGAATCCAATTCTCTATCTCGAATTTCCTCAGGGACGTATGAAGTTGTTTGGAACTATAATGTATCCGAAGAACAGATATTTGACTT
TGCAGTTTTCTAGAGGAGGAAAGAATGTGACATGTGAAGATTATTTTGATAATATGATTGTCTTTTCGGATGCATGGTGGATTGGAACAAAAGATGAAAATCAAGAGGAG
GCTCGTCTCGATTTTCCGAAAGAATTGTCTATGGTACAATGTGGTGAATATGACTTTAATGGTGGTGCTGGTGTTGTCACTACGATTAAGCCAAGTGCTCAAAAGAAGGG
AATCAACCGTGTTGAAGATAATTCCCTCAAAGGAGAACATGGAGACGACTTAGTAGACCTCGAAGACAACATGACAACTCCTATAAAGACTACACCAGTTAGACATTCCG
AAAGATCTGCTGGGAAAGTATTCAAGTATTACCCGTTGCATATATTGTTACTGTTTGTGGTGTTTGCTGTTTTGGAGGGGTTTGTTTCTGCCCAAAAGGTGCAGCTTTCT
GGTTCAAAGCGAAAGATTGACCAGCTGCTCTTTGAATTTGCAGGAGGAAAAGTCACGAGGAAGGATACAGAATATGAGGTTGAAGATGACATTGAAGAGTTGTCGAGCTC
TCAAGAGGACACTGATGAAGATTGGACAAGTTGAGGTCGTTACATTACAATGGTAAGCCGCCGCAGCAGCAGCTAGGATGCATTGCAGAGGTTATCATATTCAAAGTAAG
AGAATGCTCTACCAGTTTCTTTGAAAAGCTGCTGGCTTACTGAAATTAAAGAAATTTAACCATAAAATAATATTGAAGTCAAGTTTTTACCATGCTGTTAGTCATGTAAA
AATTCTGTTTTTGATATACCAGAGAGAAACTGTTACCCTTTTCTTGGGTTTAGAGGAAATTTTCAGCATCGACAAGGTTTGTATGCAATTTATAAACTCTCAATCGTCTG
TACTGTATGTATGTATTATGGTATTATGAAATTTTCTATATTTTATGTTAAATTTAGACCTCAACAATATTTACGAGTATTATTAGATATTAAGATATCAAGTAATGAGG
TAATT

Protein sequence

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MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRM
KLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGINRVEDNSLKGEHGDDLVDLE
DNMTTPIKTTPVRHSERSAGKVFKYYPLHILLLFVVFAVLEGFVSAQKVQLSGSKRKIDQLLFEFAGGKVTRKDTEYEVEDDIEELSSSQEDTDEDWTS

Carg06655 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome