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Carg06685 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06685
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionIntegral membrane HPP family protein
Genome locationCarg_Chr18:640184..641092
RNA-Seq ExpressionCarg06685
SyntenyCarg06685
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573018.1 hypothetical protein SDJN03_26905, partial [Cucurbita argyrosperma subsp. sororia]5.5e-7599.32Show/hide
Query:  MSLELKPIHHHFCRRSRRHYDCQQRFQPSSFISLLPNYHLLNGKQGISAKGSVGLLRRRSGGGVSRRNVVVVSSVGGVPISDGSKPDKGFVSPPLSDILW
        MSLELKPIHHHFCRRSRRHYDCQQRFQPSSFISLLPNYHLLNGKQGISAKGSVGLLRRRSGGG+SRRNVVVVSSVGGVPISDGSKPDKGFVSPPLSDILW
Subjt:  MSLELKPIHHHFCRRSRRHYDCQQRFQPSSFISLLPNYHLLNGKQGISAKGSVGLLRRRSGGGVSRRNVVVVSSVGGVPISDGSKPDKGFVSPPLSDILW

Query:  PSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR
        PSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR
Subjt:  PSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR

KAG7012206.1 hypothetical protein SDJN02_24958 [Cucurbita argyrosperma subsp. argyrosperma]4.2e-83100Show/hide
Query:  MSLELKPIHHHFCRRSRRHYDCQQRFQPSSFISLLPNYHLLNGKQGISAKGSVGLLRRRSGGGVSRRNVVVVSSVGGVPISDGSKPDKGFVSPPLSDILW
        MSLELKPIHHHFCRRSRRHYDCQQRFQPSSFISLLPNYHLLNGKQGISAKGSVGLLRRRSGGGVSRRNVVVVSSVGGVPISDGSKPDKGFVSPPLSDILW
Subjt:  MSLELKPIHHHFCRRSRRHYDCQQRFQPSSFISLLPNYHLLNGKQGISAKGSVGLLRRRSGGGVSRRNVVVVSSVGGVPISDGSKPDKGFVSPPLSDILW

Query:  PSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAARVLTLSRICLWLWLL
        PSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAARVLTLSRICLWLWLL
Subjt:  PSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAARVLTLSRICLWLWLL

XP_022954994.1 uncharacterized protein LOC111457084 [Cucurbita moschata]2.3e-7397.3Show/hide
Query:  MSLELKPIHHHFCRRSRRHYDCQQRFQPSSFISLLPNYHLLNGKQGISAKGSVGLLRRRSGGGVSRRNVVVVSSVGGVPISDGSKPDKGFVSPPLSDILW
        MSLELKPIHHHFCRRSRRHYDCQ++FQPSSFISLLPNY+LLNGKQGISAKGSVGLLRRRSGGG+SRRNVVVVSSVGGVPISDGSKPDKGFVSPPLSDILW
Subjt:  MSLELKPIHHHFCRRSRRHYDCQQRFQPSSFISLLPNYHLLNGKQGISAKGSVGLLRRRSGGGVSRRNVVVVSSVGGVPISDGSKPDKGFVSPPLSDILW

Query:  PSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR
        PSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR
Subjt:  PSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR

XP_022994663.1 uncharacterized protein LOC111490307 [Cucurbita maxima]1.2e-7297.3Show/hide
Query:  MSLELKPIHHHFCRRSRRHYDCQQRFQPSSFISLLPNYHLLNGKQGISAKGSVGLLRRRSGGGVSRRNVVVVSSVGGVPISDGSKPDKGFVSPPLSDILW
        MSLELK IHHHFCRRSRRHYDCQQ+FQPSSFISLLPNYHLLNGKQGISAK SVGLLRRRSGGG+SRRNVVVVSSVGGVPISDGSKPDKGFVSPPLSDILW
Subjt:  MSLELKPIHHHFCRRSRRHYDCQQRFQPSSFISLLPNYHLLNGKQGISAKGSVGLLRRRSGGGVSRRNVVVVSSVGGVPISDGSKPDKGFVSPPLSDILW

Query:  PSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR
        PSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR
Subjt:  PSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR

XP_023541980.1 uncharacterized protein LOC111801962 [Cucurbita pepo subsp. pepo]4.4e-7295.95Show/hide
Query:  MSLELKPIHHHFCRRSRRHYDCQQRFQPSSFISLLPNYHLLNGKQGISAKGSVGLLRRRSGGGVSRRNVVVVSSVGGVPISDGSKPDKGFVSPPLSDILW
        MSLELKPIHHHFCRRSRR YDCQQ+FQPSSFISLLPNYHLLNGK+GISA GSVGLLRRRSGGG+SRRNVVVVSSVGGVPISDGSKPDKGFVSPPLSDILW
Subjt:  MSLELKPIHHHFCRRSRRHYDCQQRFQPSSFISLLPNYHLLNGKQGISAKGSVGLLRRRSGGGVSRRNVVVVSSVGGVPISDGSKPDKGFVSPPLSDILW

Query:  PSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR
        PSAGAFAAMAILGK+DQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR
Subjt:  PSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR

TrEMBL top hitse value%identityAlignment
A0A0A0LR37 Uncharacterized protein1.6e-4363.69Show/hide
Query:  MSLELKPIHHHFCRRSRRHYDCQQRFQPS---------------SFISLLPNYHLLNGKQGISAKGSVGLL---RRRSGGGVSR--RNVVVVSSVGGVPI
        MSL+LKPIHHH      R     + +QPS               SF+SLLP+ HLLNGK+GISA+ S+GL    RRR   G  R     +V SS+ G P+
Subjt:  MSLELKPIHHHFCRRSRRHYDCQQRFQPS---------------SFISLLPNYHLLNGKQGISAKGSVGLL---RRRSGGGVSR--RNVVVVSSVGGVPI

Query:  SDGSKPDKGFVSPPLSDILWPSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR
        SDGSKP+KGFVSPPLSDILWPSAGAFAAMA+LGK+DQILAPKGLSMTIAPLGAVCAVLFATP+APAAR
Subjt:  SDGSKPDKGFVSPPLSDILWPSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR

A0A1S3AUM8 uncharacterized protein LOC1034829851.6e-4363.91Show/hide
Query:  MSLELKPIHHHFCRRSRRHYDCQQRFQPS---------------SFISLLPNYHLLNGKQGISAKGSVGLL----RRRSGG--GVSRRNVVVVSSVGGVP
        MSL+LKPIHHH      RH  C + +QPS               S +SLLP  HLLNGK+GI  + S+GL     RRRS G  G+  R+ +V SS+ G P
Subjt:  MSLELKPIHHHFCRRSRRHYDCQQRFQPS---------------SFISLLPNYHLLNGKQGISAKGSVGLL----RRRSGG--GVSRRNVVVVSSVGGVP

Query:  ISDGSKPDKGFVSPPLSDILWPSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR
        +SDGSKP+KGFVSPPLSDILWPSAGAFAAMA+LGK+DQILAPKGLSMTIAPLGAVCAVLFATP+APAAR
Subjt:  ISDGSKPDKGFVSPPLSDILWPSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR

A0A6J1E7R0 uncharacterized protein LOC111431576 isoform X11.0e-4266.26Show/hide
Query:  MSLELKPIHHHFCRRSRRHYDCQQRFQPS-----SFISLLPNYHLLNGKQGISAKGSV---GLL-----RRRSGGGVS--RRNVVVVSSVGGVPISDGSK
        MSL+LKPIHH            QQ +QPS     SFISLLPN HLLNGK+G+S  GSV   GLL     RRR+GGG        +V S +   PISDGSK
Subjt:  MSLELKPIHHHFCRRSRRHYDCQQRFQPS-----SFISLLPNYHLLNGKQGISAKGSV---GLL-----RRRSGGGVS--RRNVVVVSSVGGVPISDGSK

Query:  PDKGFVSPPLSDILWPSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR
        PDKGFVSPPLSDILWPSAGAFAAMA+LGK+DQILAPKGLSMTIAPLGAVCA+LFA P++PAAR
Subjt:  PDKGFVSPPLSDILWPSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR

A0A6J1GUM6 uncharacterized protein LOC1114570841.1e-7397.3Show/hide
Query:  MSLELKPIHHHFCRRSRRHYDCQQRFQPSSFISLLPNYHLLNGKQGISAKGSVGLLRRRSGGGVSRRNVVVVSSVGGVPISDGSKPDKGFVSPPLSDILW
        MSLELKPIHHHFCRRSRRHYDCQ++FQPSSFISLLPNY+LLNGKQGISAKGSVGLLRRRSGGG+SRRNVVVVSSVGGVPISDGSKPDKGFVSPPLSDILW
Subjt:  MSLELKPIHHHFCRRSRRHYDCQQRFQPSSFISLLPNYHLLNGKQGISAKGSVGLLRRRSGGGVSRRNVVVVSSVGGVPISDGSKPDKGFVSPPLSDILW

Query:  PSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR
        PSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR
Subjt:  PSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR

A0A6J1K5S3 uncharacterized protein LOC1114903075.6e-7397.3Show/hide
Query:  MSLELKPIHHHFCRRSRRHYDCQQRFQPSSFISLLPNYHLLNGKQGISAKGSVGLLRRRSGGGVSRRNVVVVSSVGGVPISDGSKPDKGFVSPPLSDILW
        MSLELK IHHHFCRRSRRHYDCQQ+FQPSSFISLLPNYHLLNGKQGISAK SVGLLRRRSGGG+SRRNVVVVSSVGGVPISDGSKPDKGFVSPPLSDILW
Subjt:  MSLELKPIHHHFCRRSRRHYDCQQRFQPSSFISLLPNYHLLNGKQGISAKGSVGLLRRRSGGGVSRRNVVVVSSVGGVPISDGSKPDKGFVSPPLSDILW

Query:  PSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR
        PSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR
Subjt:  PSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G47980.1 Integral membrane HPP family protein2.4e-2070.31Show/hide
Query:  KPDKGFVSPPLSDILWPSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR
        KP+K  V+P LSD++WP+AGAFAAMAI+G+IDQ+L PKG+SM++APLGAV A+LF TP+APAAR
Subjt:  KPDKGFVSPPLSDILWPSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR

AT5G62720.1 Integral membrane HPP family protein1.6e-1958.62Show/hide
Query:  RRNVVVVSSVGGV--PISDGSKPDKGFVSPP--LSDILWPSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR
        RR   VV+S G +  P  D  KPDK   +    LSD++WP+AGAFAAMA+LG++DQ+L+PKG+SM++APLGAV A+LF TP+APAAR
Subjt:  RRNVVVVSSVGGV--PISDGSKPDKGFVSPP--LSDILWPSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR

AT5G62720.2 Integral membrane HPP family protein1.6e-1958.62Show/hide
Query:  RRNVVVVSSVGGV--PISDGSKPDKGFVSPP--LSDILWPSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR
        RR   VV+S G +  P  D  KPDK   +    LSD++WP+AGAFAAMA+LG++DQ+L+PKG+SM++APLGAV A+LF TP+APAAR
Subjt:  RRNVVVVSSVGGV--PISDGSKPDKGFVSPP--LSDILWPSAGAFAAMAILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCTGGAATTGAAGCCGATTCACCACCATTTCTGCCGCCGTAGCCGCCGCCATTACGACTGTCAGCAGCGGTTTCAACCCAGTTCGTTCATTTCTTTGCTGCCGAA
TTACCATTTATTGAATGGGAAACAAGGGATTTCAGCAAAAGGGTCCGTTGGGCTGCTGAGAAGACGAAGTGGCGGCGGAGTTAGTCGCCGGAATGTTGTGGTGGTGTCCA
GCGTTGGTGGTGTCCCGATTTCAGATGGGTCGAAACCAGACAAAGGCTTTGTTTCTCCTCCTCTCAGTGACATCCTTTGGCCTTCTGCAGGGGCGTTTGCAGCGATGGCA
ATACTGGGGAAAATAGATCAAATTCTAGCGCCGAAGGGGCTTTCTATGACAATTGCACCATTGGGCGCCGTCTGTGCCGTCCTGTTCGCAACGCCCGCCGCCCCTGCCGC
TCGAGTACTCACCCTGTCTCGAATTTGCCTGTGGCTTTGGTTACTATAG
mRNA sequenceShow/hide mRNA sequence
AATGTTTTAGAAGTGGCAACGACACAGAACTGGAGTTGTCTCTTTCTGCTAATGGCTTTCTGATCTCTTCAAAGGCCAATCTGTAACACAGCTTCGAGTTTTTTCTTTAC
AGGCCTCTGTGTTCTTCAGAACTTTCCCAAATCCCCTTTGTCAGATTCACGTCTGAATTTACATTGCATGCCATTATTACTGTGATTATATTCTGTTTCTTTTCCATTTC
TATATCGCCGACACTTTTTGCGTCTTTTGTCGGCCAAACATCCAAGATAACGTTTGGTTGAGCTAGAGCAACAGTAGCTTGGAGGTGGGTCGAGGGTAAAATCCAGTATG
AGTCTGGAATTGAAGCCGATTCACCACCATTTCTGCCGCCGTAGCCGCCGCCATTACGACTGTCAGCAGCGGTTTCAACCCAGTTCGTTCATTTCTTTGCTGCCGAATTA
CCATTTATTGAATGGGAAACAAGGGATTTCAGCAAAAGGGTCCGTTGGGCTGCTGAGAAGACGAAGTGGCGGCGGAGTTAGTCGCCGGAATGTTGTGGTGGTGTCCAGCG
TTGGTGGTGTCCCGATTTCAGATGGGTCGAAACCAGACAAAGGCTTTGTTTCTCCTCCTCTCAGTGACATCCTTTGGCCTTCTGCAGGGGCGTTTGCAGCGATGGCAATA
CTGGGGAAAATAGATCAAATTCTAGCGCCGAAGGGGCTTTCTATGACAATTGCACCATTGGGCGCCGTCTGTGCCGTCCTGTTCGCAACGCCCGCCGCCCCTGCCGCTCG
AGTACTCACCCTGTCTCGAATTTGCCTGTGGCTTTGGTTACTATAG
Protein sequenceShow/hide protein sequence
MSLELKPIHHHFCRRSRRHYDCQQRFQPSSFISLLPNYHLLNGKQGISAKGSVGLLRRRSGGGVSRRNVVVVSSVGGVPISDGSKPDKGFVSPPLSDILWPSAGAFAAMA
ILGKIDQILAPKGLSMTIAPLGAVCAVLFATPAAPAARVLTLSRICLWLWLL