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Carg06698 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06698
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription factor MYB1R1-like
Genome locationCarg_Chr18:714804..716649
RNA-Seq ExpressionCarg06698
SyntenyCarg06698
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573031.1 hypothetical protein SDJN03_26918, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3895.65Show/hide
Query:  MPTFPLSVCPAVLPVPNPIENLTLGQENLDLTAEILPLNPTTPKINLNSKSTLKSGALSLNLSLPSNSANSSSKHPDFPGITRMSSGDNIIS
        MPTFPLSVCPAVLPVPNPIENLTLGQENLDL AEILPLNPT PKIN NSKS LKSGALSLNLSLPSNSANSSSKHPDFPGITRMSSGDNIIS
Subjt:  MPTFPLSVCPAVLPVPNPIENLTLGQENLDLTAEILPLNPTTPKINLNSKSTLKSGALSLNLSLPSNSANSSSKHPDFPGITRMSSGDNIIS

KAG7012219.1 hypothetical protein SDJN02_24971, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-59100Show/hide
Query:  MPTFPLSVCPAVLPVPNPIENLTLGQENLDLTAEILPLNPTTPKINLNSKSTLKSGALSLNLSLPSNSANSSSKHPDFPGITRMSSGDNIISGKERCSST
        MPTFPLSVCPAVLPVPNPIENLTLGQENLDLTAEILPLNPTTPKINLNSKSTLKSGALSLNLSLPSNSANSSSKHPDFPGITRMSSGDNIISGKERCSST
Subjt:  MPTFPLSVCPAVLPVPNPIENLTLGQENLDLTAEILPLNPTTPKINLNSKSTLKSGALSLNLSLPSNSANSSSKHPDFPGITRMSSGDNIISGKERCSST

Query:  EKELRERSSAARLIRSQGKGAVQLDR
        EKELRERSSAARLIRSQGKGAVQLDR
Subjt:  EKELRERSSAARLIRSQGKGAVQLDR

XP_022954795.1 transcription factor MYB1R1-like [Cucurbita moschata]3.8e-3996.74Show/hide
Query:  MPTFPLSVCPAVLPVPNPIENLTLGQENLDLTAEILPLNPTTPKINLNSKSTLKSGALSLNLSLPSNSANSSSKHPDFPGITRMSSGDNIIS
        MPTFPLSVCPAVLPVPNPIENLTLG ENLDLTAEILPLNPTTPKIN NSKS LKSGALSLNLSLPSNSANSSSKHPDFPGITRMSSGDNIIS
Subjt:  MPTFPLSVCPAVLPVPNPIENLTLGQENLDLTAEILPLNPTTPKINLNSKSTLKSGALSLNLSLPSNSANSSSKHPDFPGITRMSSGDNIIS

XP_022994648.1 transcription factor MYB1R1-like [Cucurbita maxima]3.6e-3793.48Show/hide
Query:  MPTFPLSVCPAVLPVPNPIENLTLGQENLDLTAEILPLNPTTPKINLNSKSTLKSGALSLNLSLPSNSANSSSKHPDFPGITRMSSGDNIIS
        MPTFPLSVCPAVLPVPNPIEN TLGQENLDL AEILPLNPTTPKIN N KS LKSGALSLNLSLPSNSANSSSKHPDFPGI+RMSSGDNIIS
Subjt:  MPTFPLSVCPAVLPVPNPIENLTLGQENLDLTAEILPLNPTTPKINLNSKSTLKSGALSLNLSLPSNSANSSSKHPDFPGITRMSSGDNIIS

XP_023541660.1 transcription factor MYB1R1-like [Cucurbita pepo subsp. pepo]3.6e-3793.48Show/hide
Query:  MPTFPLSVCPAVLPVPNPIENLTLGQENLDLTAEILPLNPTTPKINLNSKSTLKSGALSLNLSLPSNSANSSSKHPDFPGITRMSSGDNIIS
        MPTFPLSVCPAVLPVPNPIENLTL QENLDL AEILPLNPTTP IN NSKS LKSGALSLNLSLPSNSANSSSKHPDFPGI+RMSSGDNIIS
Subjt:  MPTFPLSVCPAVLPVPNPIENLTLGQENLDLTAEILPLNPTTPKINLNSKSTLKSGALSLNLSLPSNSANSSSKHPDFPGITRMSSGDNIIS

TrEMBL top hitse value%identityAlignment
A0A5A7ULN5 Transcription factor MYB1R19.5e-2059.79Show/hide
Query:  MPTFPLSVCPAVLPVPNPIENLTLGQENLD-----LTAEILPLNPTTPKINLNSKSTLKSGALSLNLSLPSNSANSSSKHPDFPGITRMSSGDNIIS
        +PTFPLSVCPA++P+P P+E  T  + NL+     + AE+LPL+ TT + NLNSKSTL SGALSLNL+LPS+S+NSS KH  F G++ +S+GDNIIS
Subjt:  MPTFPLSVCPAVLPVPNPIENLTLGQENLD-----LTAEILPLNPTTPKINLNSKSTLKSGALSLNLSLPSNSANSSSKHPDFPGITRMSSGDNIIS

A0A5D3BJ54 Transcription factor MYB1R19.5e-2059.79Show/hide
Query:  MPTFPLSVCPAVLPVPNPIENLTLGQENLD-----LTAEILPLNPTTPKINLNSKSTLKSGALSLNLSLPSNSANSSSKHPDFPGITRMSSGDNIIS
        +PTFPLSVCPA++P+P P+E  T  + NL+     + AE+LPL+ TT + NLNSKSTL SGALSLNL+LPS+S+NSS KH  F G++ +S+GDNIIS
Subjt:  MPTFPLSVCPAVLPVPNPIENLTLGQENLD-----LTAEILPLNPTTPKINLNSKSTLKSGALSLNLSLPSNSANSSSKHPDFPGITRMSSGDNIIS

A0A6J1C6U7 transcription factor MYB1R1-like3.3e-2062.14Show/hide
Query:  MPTFPLSVCPAVLPVPNPIENLTLGQENLD----------LTAEILPLNPTTPKINLNSKSTLKS-GALSLNLSLPSNSANSSSKHPDFPGITRMSSGDN
        MP FPLSVCPA+LPVP P+E LTLG +NL+          L AEILPLN TTP+INLN KST+ S G+LSLNL+L S+S +SS  H  F GI+ MSS DN
Subjt:  MPTFPLSVCPAVLPVPNPIENLTLGQENLD----------LTAEILPLNPTTPKINLNSKSTLKS-GALSLNLSLPSNSANSSSKHPDFPGITRMSSGDN

Query:  IIS
        IIS
Subjt:  IIS

A0A6J1GTF0 transcription factor MYB1R1-like1.8e-3996.74Show/hide
Query:  MPTFPLSVCPAVLPVPNPIENLTLGQENLDLTAEILPLNPTTPKINLNSKSTLKSGALSLNLSLPSNSANSSSKHPDFPGITRMSSGDNIIS
        MPTFPLSVCPAVLPVPNPIENLTLG ENLDLTAEILPLNPTTPKIN NSKS LKSGALSLNLSLPSNSANSSSKHPDFPGITRMSSGDNIIS
Subjt:  MPTFPLSVCPAVLPVPNPIENLTLGQENLDLTAEILPLNPTTPKINLNSKSTLKSGALSLNLSLPSNSANSSSKHPDFPGITRMSSGDNIIS

A0A6J1K5R0 transcription factor MYB1R1-like1.7e-3793.48Show/hide
Query:  MPTFPLSVCPAVLPVPNPIENLTLGQENLDLTAEILPLNPTTPKINLNSKSTLKSGALSLNLSLPSNSANSSSKHPDFPGITRMSSGDNIIS
        MPTFPLSVCPAVLPVPNPIEN TLGQENLDL AEILPLNPTTPKIN N KS LKSGALSLNLSLPSNSANSSSKHPDFPGI+RMSSGDNIIS
Subjt:  MPTFPLSVCPAVLPVPNPIENLTLGQENLDLTAEILPLNPTTPKINLNSKSTLKSGALSLNLSLPSNSANSSSKHPDFPGITRMSSGDNIIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACTTTTCCTCTATCTGTTTGCCCTGCAGTTTTACCTGTGCCAAATCCAATCGAAAATCTCACACTTGGGCAAGAAAACCTTGACCTTACTGCTGAAATTTTGCC
ACTCAATCCAACCACACCCAAGATTAACTTGAATTCGAAGTCGACATTAAAATCTGGAGCTCTTTCTCTTAACCTTTCTTTGCCTTCAAACTCTGCCAATTCTTCATCAA
AACACCCTGATTTCCCAGGAATCACAAGAATGAGCAGCGGGGATAACATTATCAGTGGGAAGGAGCGGTGCAGCTCGACTGAAAAGGAGTTGAGGGAAAGGAGCAGTGCA
GCTCGACTGATAAGGAGCCAAGGGAAAGGAGCGGTGCAACTCGATCGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAACTTTTCCTCTATCTGTTTGCCCTGCAGTTTTACCTGTGCCAAATCCAATCGAAAATCTCACACTTGGGCAAGAAAACCTTGACCTTACTGCTGAAATTTTGCC
ACTCAATCCAACCACACCCAAGATTAACTTGAATTCGAAGTCGACATTAAAATCTGGAGCTCTTTCTCTTAACCTTTCTTTGCCTTCAAACTCTGCCAATTCTTCATCAA
AACACCCTGATTTCCCAGGAATCACAAGAATGAGCAGCGGGGATAACATTATCAGTGGGAAGGAGCGGTGCAGCTCGACTGAAAAGGAGTTGAGGGAAAGGAGCAGTGCA
GCTCGACTGATAAGGAGCCAAGGGAAAGGAGCGGTGCAACTCGATCGATAA
Protein sequenceShow/hide protein sequence
MPTFPLSVCPAVLPVPNPIENLTLGQENLDLTAEILPLNPTTPKINLNSKSTLKSGALSLNLSLPSNSANSSSKHPDFPGITRMSSGDNIISGKERCSSTEKELRERSSA
ARLIRSQGKGAVQLDR