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Carg06716 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06716
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNHL domain protein
Genome locationCarg_Chr18:815798..816289
RNA-Seq ExpressionCarg06716
SyntenyCarg06716
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012236.1 hypothetical protein SDJN02_24988, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-92100Show/hide
Query:  MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR
        MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR
Subjt:  MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR

Query:  FNRNRPAAVKLGKFQYDPISYALNFDEGNNGDVDFEEEECNGGFKNFSERFAAVPAPVKSADV
        FNRNRPAAVKLGKFQYDPISYALNFDEGNNGDVDFEEEECNGGFKNFSERFAAVPAPVKSADV
Subjt:  FNRNRPAAVKLGKFQYDPISYALNFDEGNNGDVDFEEEECNGGFKNFSERFAAVPAPVKSADV

XP_022954946.1 uncharacterized protein LOC111457052 [Cucurbita moschata]5.5e-91100Show/hide
Query:  MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR
        MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR
Subjt:  MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR

Query:  FNRNRPAAVKLGKFQYDPISYALNFDEGNNGDVDFEEEECNGGFKNFSERFAAVPAPVKSA
        FNRNRPAAVKLGKFQYDPISYALNFDEGNNGDVDFEEEECNGGFKNFSERFAAVPAPVKSA
Subjt:  FNRNRPAAVKLGKFQYDPISYALNFDEGNNGDVDFEEEECNGGFKNFSERFAAVPAPVKSA

XP_022994674.1 uncharacterized protein LOC111490316 [Cucurbita maxima]8.8e-8997.52Show/hide
Query:  MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR
        MGDRDGAFKE ESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKAT+D EDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR
Subjt:  MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR

Query:  FNRNRPAAVKLGKFQYDPISYALNFDEGNNGDVDFEEEECNGGFKNFSERFAAVPAPVKSA
        FNRNRPAAVKLGKFQYDPISYALNFDEGNNG+VDFEEEECNGGFKNFSERFAAVPAPVKSA
Subjt:  FNRNRPAAVKLGKFQYDPISYALNFDEGNNGDVDFEEEECNGGFKNFSERFAAVPAPVKSA

XP_023519821.1 uncharacterized protein LOC111783153 [Cucurbita pepo subsp. pepo]6.6e-6877.64Show/hide
Query:  MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR
        MGDRDG FKE ES GEI GADA L S RY+C CFPCFG  RS SDE+SWWERAKA A++      DGEDHWW+GG+RS+KKLREWSEIVAGPRWKTFIRR
Subjt:  MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR

Query:  FNRNRPAAVKLGKFQYDPISYALNFDEGNNGDVDFEEEECNGGFKNFSERFAAVPAPVKSA
        FNRNRPAAVKLGKFQYDPISYALNFDEG+NGDVDFE +E +GGF+NFS+RF+AVPA  KS+
Subjt:  FNRNRPAAVKLGKFQYDPISYALNFDEGNNGDVDFEEEECNGGFKNFSERFAAVPAPVKSA

XP_038894780.1 uncharacterized protein LOC120083201 [Benincasa hispida]1.0e-6877.78Show/hide
Query:  MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR
        MGDRDGAFKE ES GEI GADA L S RY+C CFPCFGPRRS SDE+SWWER K  A++      DGEDHWWTGG+RS+KKLREWSEIVAGPRWKTFIRR
Subjt:  MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR

Query:  FNRNRPAAVKLGKFQYDPISYALNFDEGNNGDVDFE-EEECNGGFKNFSERFAAVPAPVKSA
        FNRNRPA VKLGKFQYDPISYALNFD+G+NGDVDF+ +E   GGF+NFS+RFAAVP PVKS+
Subjt:  FNRNRPAAVKLGKFQYDPISYALNFDEGNNGDVDFE-EEECNGGFKNFSERFAAVPAPVKSA

TrEMBL top hitse value%identityAlignment
A0A5A7ULQ3 Uncharacterized protein5.3e-6375.9Show/hide
Query:  MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR
        MGDRDGAFKE ES   I GADA L S RY+C CFPCFGP RS SDE+SWWER K  A++      DGEDHWWTGG+RS+KKLREWSEIVAGPRWKTFIRR
Subjt:  MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR

Query:  FNRNRPAAVKLGKFQYDPISYALNFDEG-NNGDVDFE---EEECNGGFKNFSERFAAV-PAPVKSA
        FNRNRPA VKLGKFQYDPISYALNFDEG NNGDVDFE   E    GGF+NFS+RFAAV PAP+KS+
Subjt:  FNRNRPAAVKLGKFQYDPISYALNFDEG-NNGDVDFE---EEECNGGFKNFSERFAAV-PAPVKSA

A0A6J1ED51 uncharacterized protein LOC1114314564.2e-6877.64Show/hide
Query:  MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR
        MGDRDG FKE ES GEI GADA L S RY C CFPCFG  RS SDE+SWWERAKA A++      DGEDHWW+GG+RS+KKLREWSEIVAGPRWKTFIRR
Subjt:  MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR

Query:  FNRNRPAAVKLGKFQYDPISYALNFDEGNNGDVDFEEEECNGGFKNFSERFAAVPAPVKSA
        FNRNRPAAVKLGKFQYDPISYALNFDEG+NGDVDFE +E +GGF+NFS+RF+AVPA  KS+
Subjt:  FNRNRPAAVKLGKFQYDPISYALNFDEGNNGDVDFEEEECNGGFKNFSERFAAVPAPVKSA

A0A6J1GSC5 uncharacterized protein LOC1114570522.7e-91100Show/hide
Query:  MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR
        MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR
Subjt:  MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR

Query:  FNRNRPAAVKLGKFQYDPISYALNFDEGNNGDVDFEEEECNGGFKNFSERFAAVPAPVKSA
        FNRNRPAAVKLGKFQYDPISYALNFDEGNNGDVDFEEEECNGGFKNFSERFAAVPAPVKSA
Subjt:  FNRNRPAAVKLGKFQYDPISYALNFDEGNNGDVDFEEEECNGGFKNFSERFAAVPAPVKSA

A0A6J1K3I4 uncharacterized protein LOC1114903164.3e-8997.52Show/hide
Query:  MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR
        MGDRDGAFKE ESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKAT+D EDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR
Subjt:  MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR

Query:  FNRNRPAAVKLGKFQYDPISYALNFDEGNNGDVDFEEEECNGGFKNFSERFAAVPAPVKSA
        FNRNRPAAVKLGKFQYDPISYALNFDEGNNG+VDFEEEECNGGFKNFSERFAAVPAPVKSA
Subjt:  FNRNRPAAVKLGKFQYDPISYALNFDEGNNGDVDFEEEECNGGFKNFSERFAAVPAPVKSA

A0A6J1KJ01 uncharacterized protein LOC1114950355.4e-6877.02Show/hide
Query:  MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR
        MGDRDG FKE ES GEI GADA L S RY+C CFPCFG  RS SDE+SWWERAKA A++      DGEDHWW+GG+RS+KKLREWSEIVAGPRWKTFIRR
Subjt:  MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRR

Query:  FNRNRPAAVKLGKFQYDPISYALNFDEGNNGDVDFEEEECNGGFKNFSERFAAVPAPVKSA
        FNRNRPAAVKLGKFQYDPISYALNFDEG+NGDV+FE +E +GGF+NFS+RF+AVPA  KS+
Subjt:  FNRNRPAAVKLGKFQYDPISYALNFDEGNNGDVDFEEEECNGGFKNFSERFAAVPAPVKSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01430.1 BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1)4.3e-1732.5Show/hide
Query:  LVSGRYNCLCFPCFGPRR-SVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRRFNRNR-----------------
        L + R  C   PC    + S      WW+R     +      ++ ++ WW   +R  +++REWSE+VAGPRWKT+IRRF R+                  
Subjt:  LVSGRYNCLCFPCFGPRR-SVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRRFNRNR-----------------

Query:  -----PAAVKLGKFQYDPISYALNFDEGNNGDVDFEEEECNGGFKNFSERFAAVPAPVKS
               +   GKF+YD +SY+LNFD+GN     F++E     ++++S RFAA   PV +
Subjt:  -----PAAVKLGKFQYDPISYALNFDEGNNGDVDFEEEECNGGFKNFSERFAAVPAPVKS

AT3G48020.1 unknown protein9.3e-2044.44Show/hide
Query:  SVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRRFNRNRPAAV---KLGKFQYDPISYALNFDEGNNGDVDFEEE
        S + + SWW+R               E  WW   VR+  K+REWSEIVAGPRWKTFIRRFNR+           KF+YDP+SY L+F++    D D ++E
Subjt:  SVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRRFNRNRPAAV---KLGKFQYDPISYALNFDEGNNGDVDFEEE

Query:  ECNGGFKNFSERFAAVP
           GG ++FS R+A+VP
Subjt:  ECNGGFKNFSERFAAVP

AT5G14890.1 NHL domain-containing protein2.3e-1836.42Show/hide
Query:  MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEIS-WWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIR
        MG       E ++T E+  A   + + R  C   PC G  +      S WW+      R R    ++ ++ WW  G     K+REWSEIVAGP+WKTFIR
Subjt:  MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEIS-WWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIR

Query:  RFNR------------NRPAAVKLGKFQYDPISYALNFDEGNNGDVDFEEEECNGGFKNFSERFAAVPAPVKS
        RF R            NRP  V    F+YD  SY+LNFD+G      FE+E     ++++S RFAA   PV +
Subjt:  RFNR------------NRPAAVKLGKFQYDPISYALNFDEGNNGDVDFEEEECNGGFKNFSERFAAVPAPVKS

AT5G25240.1 unknown protein3.7e-0837.35Show/hide
Query:  WERAKAGARARAK-ATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRRFNRNRPAAVKLGKFQYDPISYALNFDEGNNG
        W R    +R+R   +    E+     G   +K L+E SE +AGP+WK FIR F+  R    +   F YD  +Y+LNFD+G +G
Subjt:  WERAKAGARARAK-ATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRRFNRNRPAAVKLGKFQYDPISYALNFDEGNNG

AT5G62865.1 unknown protein2.0e-2246.56Show/hide
Query:  CLCFPCF-GPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRRFNRNRPAAVKLG---KFQYDPISYALNFD
        C CFP F   R S +   S W R +    +        E  WW   +R+  K+REWSEIVAGPRWKTFIRRFNR+           KFQYDP+SY+LNFD
Subjt:  CLCFPCF-GPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRRFNRNRPAAVKLG---KFQYDPISYALNFD

Query:  EGNNGDVDFEEEEC--NGGFKNFSERFAAVP
        +      D EE+E    GG ++FS RFA+VP
Subjt:  EGNNGDVDFEEEEC--NGGFKNFSERFAAVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGACCGTGACGGAGCTTTCAAAGAATCGGAGTCCACAGGGGAAATCGGCGGCGCCGATGCTCATTTGGTCTCCGGACGATATAATTGCTTATGCTTCCCTTGCTT
CGGACCTCGTCGGTCGGTTTCCGACGAGATTTCCTGGTGGGAACGGGCGAAGGCGGGAGCGAGAGCGAGAGCGAAAGCCACCGTAGACGGCGAGGATCATTGGTGGACCG
GCGGAGTTAGATCTGTCAAGAAGCTTCGTGAATGGTCCGAGATCGTCGCCGGTCCGAGATGGAAAACGTTCATTCGTCGGTTCAACCGGAACCGGCCCGCTGCCGTGAAG
CTTGGGAAATTCCAGTATGATCCCATCAGTTACGCTTTGAATTTCGACGAGGGAAATAACGGCGATGTGGATTTCGAAGAGGAGGAGTGCAACGGTGGGTTTAAGAACTT
CTCCGAACGGTTCGCTGCCGTGCCGGCTCCGGTGAAGTCGGCGGATGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGACCGTGACGGAGCTTTCAAAGAATCGGAGTCCACAGGGGAAATCGGCGGCGCCGATGCTCATTTGGTCTCCGGACGATATAATTGCTTATGCTTCCCTTGCTT
CGGACCTCGTCGGTCGGTTTCCGACGAGATTTCCTGGTGGGAACGGGCGAAGGCGGGAGCGAGAGCGAGAGCGAAAGCCACCGTAGACGGCGAGGATCATTGGTGGACCG
GCGGAGTTAGATCTGTCAAGAAGCTTCGTGAATGGTCCGAGATCGTCGCCGGTCCGAGATGGAAAACGTTCATTCGTCGGTTCAACCGGAACCGGCCCGCTGCCGTGAAG
CTTGGGAAATTCCAGTATGATCCCATCAGTTACGCTTTGAATTTCGACGAGGGAAATAACGGCGATGTGGATTTCGAAGAGGAGGAGTGCAACGGTGGGTTTAAGAACTT
CTCCGAACGGTTCGCTGCCGTGCCGGCTCCGGTGAAGTCGGCGGATGTATAG
Protein sequenceShow/hide protein sequence
MGDRDGAFKESESTGEIGGADAHLVSGRYNCLCFPCFGPRRSVSDEISWWERAKAGARARAKATVDGEDHWWTGGVRSVKKLREWSEIVAGPRWKTFIRRFNRNRPAAVK
LGKFQYDPISYALNFDEGNNGDVDFEEEECNGGFKNFSERFAAVPAPVKSADV