; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg06717 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06717
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein DELETION OF SUV3 SUPPRESSOR 1(I)-like
Genome locationCarg_Chr18:817776..819485
RNA-Seq ExpressionCarg06717
SyntenyCarg06717
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006406 - mRNA export from nucleus (biological process)
GO:0043248 - proteasome assembly (biological process)
GO:0008541 - proteasome regulatory particle, lid subcomplex (cellular component)
InterPro domainsIPR007834 - DSS1/SEM1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573049.1 Protein DELETION OF SUV3 SUPPRESSOR 1(I), partial [Cucurbita argyrosperma subsp. sororia]7.1e-30100Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK
        MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK

XP_004152470.1 protein DELETION OF SUV3 SUPPRESSOR 1(I) [Cucumis sativus]1.7e-2897.26Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK
        MATESKTATEEVKIDLFEDDDEFEEFEINEEWE+KEEGKEITQQWEDDWDDDDVNDDFSLQLRRELES TEKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK

XP_022923645.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita moschata]1.7e-2897.26Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK
        MATE+KTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELES TEKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK

XP_022954951.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita moschata]7.1e-30100Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK
        MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK

XP_038893721.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Benincasa hispida]8.7e-2894.52Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK
        MATESKTATEEVK+DLFEDDDEFEEFEINEEWEVKEEGKE+TQQWEDDWDDDDVNDDFSLQLRRELES  EKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK

TrEMBL top hitse value%identityAlignment
A0A0A0LU33 Uncharacterized protein8.5e-2997.26Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK
        MATESKTATEEVKIDLFEDDDEFEEFEINEEWE+KEEGKEITQQWEDDWDDDDVNDDFSLQLRRELES TEKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK

A0A5A7UJ57 Putative 26S proteasome complex subunit sem1-18.5e-2997.26Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK
        MATESKTATEEVKIDLFEDDDEFEEFEINEEWE+KEEGKEITQQWEDDWDDDDVNDDFSLQLRRELES TEKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK

A0A6J1ECF8 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like8.5e-2997.26Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK
        MATE+KTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELES TEKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK

A0A6J1GSC9 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like3.4e-30100Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK
        MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK

A0A6J1KGG4 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like8.5e-2997.26Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK
        MATE+KTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELES TEKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK

SwissProt top hitse value%identityAlignment
P60896 26S proteasome complex subunit SEM11.7e-0550.79Show/hide
Query:  EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEK
        + V + L E+DDEFEEF   E+W   +E ++    WED+WDDD+V DDFS QLR ELE +  K
Subjt:  EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEK

P60897 26S proteasome complex subunit SEM11.7e-0550.79Show/hide
Query:  EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEK
        + V + L E+DDEFEEF   E+W   +E ++    WED+WDDD+V DDFS QLR ELE +  K
Subjt:  EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEK

Q3ZBR6 26S proteasome complex subunit SEM11.7e-0550.79Show/hide
Query:  EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEK
        + V + L E+DDEFEEF   E+W   +E ++    WED+WDDD+V DDFS QLR ELE +  K
Subjt:  EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEK

Q9FL96 Protein DSS1 HOMOLOG ON CHROMOSOME V2.8e-2172.6Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK
        MA E K A E VK+DLFEDDDEFEEFEINE+W  KEE KE++ QWEDDWDDDDV+DDFS QL++ELE+ +EKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK

Q9XIR8 Protein DELETION OF SUV3 SUPPRESSOR 1(I)4.3e-2277.03Show/hide
Query:  MATESKTATEE-VKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK
        MA E K AT E VK+DLFEDDDEFEEFEINE+W  KEE KE++QQWEDDWDDDDVNDDFS QLR+ELE+ T+KK
Subjt:  MATESKTATEE-VKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK

Arabidopsis top hitse value%identityAlignment
AT1G64750.1 deletion of SUV3 suppressor 1(I)3.1e-2377.03Show/hide
Query:  MATESKTATEE-VKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK
        MA E K AT E VK+DLFEDDDEFEEFEINE+W  KEE KE++QQWEDDWDDDDVNDDFS QLR+ELE+ T+KK
Subjt:  MATESKTATEE-VKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK

AT1G64750.2 deletion of SUV3 suppressor 1(I)3.1e-2377.03Show/hide
Query:  MATESKTATEE-VKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK
        MA E K AT E VK+DLFEDDDEFEEFEINE+W  KEE KE++QQWEDDWDDDDVNDDFS QLR+ELE+ T+KK
Subjt:  MATESKTATEE-VKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK

AT1G64750.3 deletion of SUV3 suppressor 1(I)3.3e-1749.57Show/hide
Query:  MATESKTATEE-VKIDLFEDDDEFEEFEINE-----------------------------------------EWEVKEEGKEITQQWEDDWDDDDVNDDF
        MA E K AT E VK+DLFEDDDEFEEFEINE                                         +W  KEE KE++QQWEDDWDDDDVNDDF
Subjt:  MATESKTATEE-VKIDLFEDDDEFEEFEINE-----------------------------------------EWEVKEEGKEITQQWEDDWDDDDVNDDF

Query:  SLQLRRELESYTEKK
        S QLR+ELE+ T+KK
Subjt:  SLQLRRELESYTEKK

AT5G45010.1 DSS1 homolog on chromosome V2.0e-2272.6Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK
        MA E K A E VK+DLFEDDDEFEEFEINE+W  KEE KE++ QWEDDWDDDDV+DDFS QL++ELE+ +EKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGAATCCAAAACCGCTACTGAGGAAGTTAAGATTGATCTCTTTGAAGATGATGATGAGTTTGAAGAGTTTGAGATTAATGAAGAGTGGGAAGTCAAAGAAGA
AGGGAAGGAAATTACTCAGCAGTGGGAAGACGACTGGGATGACGATGATGTCAACGACGACTTCTCGTTGCAGCTTAGGAGAGAATTGGAGAGCTATACCGAGAAGAAAT
GA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACTGAATCCAAAACCGCTACTGAGGAAGTTAAGATTGATCTCTTTGAAGATGATGATGAGTTTGAAGAGTTTGAGATTAATGAAGAGTGGGAAGTCAAAGAAGA
AGGGAAGGAAATTACTCAGCAGTGGGAAGACGACTGGGATGACGATGATGTCAACGACGACTTCTCGTTGCAGCTTAGGAGAGAATTGGAGAGCTATACCGAGAAGAAAT
GA
Protein sequenceShow/hide protein sequence
MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK