; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg06720 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06720
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription factor bHLH162-like
Genome locationCarg_Chr18:831274..832373
RNA-Seq ExpressionCarg06720
SyntenyCarg06720
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:2000112 - regulation of cellular macromolecule biosynthetic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR015660 - Achaete-scute transcription factor-related
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573052.1 Transcription factor basic helix-loop-helix 168, partial [Cucurbita argyrosperma subsp. sororia]7.3e-6286.96Show/hide
Query:  MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFPIVEVRELCSGIVHVTLISSVDRNVMLNEI
        MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTF IVEVRELCSGIVHVTLISSVDRNVMLN+I
Subjt:  MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFPIVEVRELCSGIVHVTLISSVDRNVMLNEI

Query:  IGVVEEEGGEV-------------------AKISRVGIETSRVEKRLKHLIIEAREDGRDK
        IGVVEEEGGEV                   AKISRVGIETSRVEKRLKHLIIEAREDGRDK
Subjt:  IGVVEEEGGEV-------------------AKISRVGIETSRVEKRLKHLIIEAREDGRDK

KAG7012240.1 Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-82100Show/hide
Query:  MAKPGIDGGASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFPIVE
        MAKPGIDGGASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFPIVE
Subjt:  MAKPGIDGGASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFPIVE

Query:  VRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEVAKISRVGIETSRVEKRLKHLIIEAREDGRDK
        VRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEVAKISRVGIETSRVEKRLKHLIIEAREDGRDK
Subjt:  VRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEVAKISRVGIETSRVEKRLKHLIIEAREDGRDK

XP_022954432.1 transcription factor bHLH168-like [Cucurbita moschata]1.1e-7889.84Show/hide
Query:  MAKPGIDGGASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFPIVE
        MAKPGIDGGASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFPIVE
Subjt:  MAKPGIDGGASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFPIVE

Query:  VRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEV-------------------AKISRVGIETSRVEKRLKHLIIEAREDGRDK
        VRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEV                   AKISRVGIETSRVEKRLKHLIIEAREDGRDK
Subjt:  VRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEV-------------------AKISRVGIETSRVEKRLKHLIIEAREDGRDK

XP_022994121.1 transcription factor bHLH168-like [Cucurbita maxima]4.2e-7081.82Show/hide
Query:  MAKPGIDGGASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFPIVE
        MAKPG +GGAS KLDRK VEKNRRIHMKSLCSKLF+LVPSSHYKISKDLLSQQTQISYVIAYI ELKERVESLEKRKEALQLQIHSQL TS+DSTFPIVE
Subjt:  MAKPGIDGGASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFPIVE

Query:  VRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEV-------------------AKISRVGIETSRVEKRLKHLIIEAREDGRDK
        V+ELCSGIVHVTLISSV RNVMLNEII V+EEEGGEV                   AKISRVGIETSR+EKRL++LIIEAREDGRDK
Subjt:  VRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEV-------------------AKISRVGIETSRVEKRLKHLIIEAREDGRDK

XP_023542199.1 transcription factor bHLH168-like [Cucurbita pepo subsp. pepo]4.0e-7687.17Show/hide
Query:  MAKPGIDGGASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFPIVE
        MAKPGIDGGAS KLDRK VEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYI ELKERVESLEK+KEALQLQIHSQLPTSSDSTFPIVE
Subjt:  MAKPGIDGGASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFPIVE

Query:  VRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEV-------------------AKISRVGIETSRVEKRLKHLIIEAREDGRDK
        VRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEV                   AKI RVGIETSRVEKRLKHLIIEAREDGRDK
Subjt:  VRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEV-------------------AKISRVGIETSRVEKRLKHLIIEAREDGRDK

TrEMBL top hitse value%identityAlignment
A0A1S3AW43 uncharacterized protein LOC1034834407.6e-4155.56Show/hide
Query:  GIDGGASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQ-----IHSQLPTSSDSTFPIV
        G    +S +LDRK +EKNRR HMKSLCS LFNLVP SH+KI K+L+SQQ QI +VIAYI ELKERVE+LEKRK+AL+LQ     IH Q   ++D T PI+
Subjt:  GIDGGASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQ-----IHSQLPTSSDSTFPIV

Query:  EVRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEV-------------------AKISRVGIETSRVEKRLKHLIIE
        E+ +L + IVH+ LISSV+R+ ML++II V+EEEGG+V                   AKISR+GIETSRV++RL +L+ +
Subjt:  EVRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEV-------------------AKISRVGIETSRVEKRLKHLIIE

A0A4D6KXF0 Achaete-scute transcription factor-related1.1e-2645.93Show/hide
Query:  ASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPT----SSDSTFPIVEVRELC
        AS KLDRK +E+NRRIHMK+LC KL +++PS + K +KD+LSQQ Q+     YIK L+ER+E L+  KE +   + +        S DS  P++E++EL 
Subjt:  ASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPT----SSDSTFPIVEVRELC

Query:  SGIVHVTLISSVDRNVMLNEIIGVVEEEGGEV-------------------AKISRVGIETSRVEKRLKHLI
        SGI  V LIS V++N ML E+IGV+EEEG EV                    KISRVG+E +RV ++L+ LI
Subjt:  SGIVHVTLISSVDRNVMLNEIIGVVEEEGGEV-------------------AKISRVGIETSRVEKRLKHLI

A0A6J1C669 transcription factor bHLH162-like5.3e-3459.18Show/hide
Query:  MAKPGIDGGASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIH------SQLPTSSDS
        MAK G     S+KLDRK +EKNRR+HMKSLCSKL +L+P SH+KISKDLLSQQ QISYVIAYI ELKERVE LEK+K AL+   H      S+ P    S
Subjt:  MAKPGIDGGASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIH------SQLPTSSDS

Query:  TFPIVEVRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEVAKIS
        T P+VE+R+L S ++ V LIS ++RN +L ++I +VEEEGG+V   S
Subjt:  TFPIVEVRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEVAKIS

A0A6J1GQZ4 transcription factor bHLH168-like5.4e-7989.84Show/hide
Query:  MAKPGIDGGASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFPIVE
        MAKPGIDGGASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFPIVE
Subjt:  MAKPGIDGGASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFPIVE

Query:  VRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEV-------------------AKISRVGIETSRVEKRLKHLIIEAREDGRDK
        VRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEV                   AKISRVGIETSRVEKRLKHLIIEAREDGRDK
Subjt:  VRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEV-------------------AKISRVGIETSRVEKRLKHLIIEAREDGRDK

A0A6J1JY79 transcription factor bHLH168-like2.1e-7081.82Show/hide
Query:  MAKPGIDGGASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFPIVE
        MAKPG +GGAS KLDRK VEKNRRIHMKSLCSKLF+LVPSSHYKISKDLLSQQTQISYVIAYI ELKERVESLEKRKEALQLQIHSQL TS+DSTFPIVE
Subjt:  MAKPGIDGGASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFPIVE

Query:  VRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEV-------------------AKISRVGIETSRVEKRLKHLIIEAREDGRDK
        V+ELCSGIVHVTLISSV RNVMLNEII V+EEEGGEV                   AKISRVGIETSR+EKRL++LIIEAREDGRDK
Subjt:  VRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEV-------------------AKISRVGIETSRVEKRLKHLIIEAREDGRDK

SwissProt top hitse value%identityAlignment
F4JIJ7 Transcription factor bHLH1624.3e-0934.9Show/hide
Query:  GASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEAL-------------QLQIHSQLPTSSDST
        G S  +DRK VEKNRR+ MKSL S+L +L+P   +  S + L+   Q+     YIK+L+  VE   +RK  L                + S +  S    
Subjt:  GASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEAL-------------QLQIHSQLPTSSDST

Query:  FPIVEVRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEVAKISRVG
         P +E++E  S I H+ L++S++   M  EII V+ EE G  A+I+  G
Subjt:  FPIVEVRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEVAKISRVG

Q9XIJ1 Transcription factor bHLH1686.9e-0730.46Show/hide
Query:  GIDGGASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFPIVEVREL
        G    +S++  R + EK RR+ MK L S L     SSH   ++ L   Q  I   ++Y+ +LKE+V  L + K  + L    +  +   S  P + +R L
Subjt:  GIDGGASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFPIVEVREL

Query:  CSGIVHVTLISSVD-RNVMLNEIIGVVEEEGGEV-------------------AKISRVGIETSRVEKRLKHLI
         S I+ + L+  ++ + VML++++ V EEEG +V                   A I R+GI+ SR+E+RL+ +I
Subjt:  CSGIVHVTLISSVD-RNVMLNEIIGVVEEEGGEV-------------------AKISRVGIETSRVEKRLKHLI

Arabidopsis top hitse value%identityAlignment
AT1G10586.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.9e-0830.46Show/hide
Query:  GIDGGASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFPIVEVREL
        G    +S++  R + EK RR+ MK L S L     SSH   ++ L   Q  I   ++Y+ +LKE+V  L + K  + L    +  +   S  P + +R L
Subjt:  GIDGGASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFPIVEVREL

Query:  CSGIVHVTLISSVD-RNVMLNEIIGVVEEEGGEV-------------------AKISRVGIETSRVEKRLKHLI
         S I+ + L+  ++ + VML++++ V EEEG +V                   A I R+GI+ SR+E+RL+ +I
Subjt:  CSGIVHVTLISSVD-RNVMLNEIIGVVEEEGGEV-------------------AKISRVGIETSRVEKRLKHLI

AT1G10586.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.5e-0429.23Show/hide
Query:  LLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFPIVEVRELCSGIVHVTLISSVD-RNVMLNEIIGVVEEEGGEV----------
        LL     I   ++Y+ +LKE+V  L + K  + L    +  +   S  P + +R L S I+ + L+  ++ + VML++++ V EEEG +V          
Subjt:  LLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFPIVEVRELCSGIVHVTLISSVD-RNVMLNEIIGVVEEEGGEV----------

Query:  ---------AKISRVGIETSRVEKRLKHLI
                 A I R+GI+ SR+E+RL+ +I
Subjt:  ---------AKISRVGIETSRVEKRLKHLI

AT4G20970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein3.1e-1034.9Show/hide
Query:  GASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEAL-------------QLQIHSQLPTSSDST
        G S  +DRK VEKNRR+ MKSL S+L +L+P   +  S + L+   Q+     YIK+L+  VE   +RK  L                + S +  S    
Subjt:  GASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEAL-------------QLQIHSQLPTSSDST

Query:  FPIVEVRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEVAKISRVG
         P +E++E  S I H+ L++S++   M  EII V+ EE G  A+I+  G
Subjt:  FPIVEVRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEVAKISRVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGCCCGGCATCGATGGCGGAGCTTCGATCAAACTCGATCGTAAAATCGTCGAGAAAAACCGAAGAATTCATATGAAATCGCTGTGTTCTAAGCTCTTCAATCT
TGTTCCTTCCTCCCATTACAAAATTTCTAAGGATTTGCTATCCCAACAGACCCAAATCTCATACGTGATTGCTTACATAAAAGAGCTGAAAGAAAGAGTGGAGAGTTTGG
AGAAAAGGAAGGAAGCTTTACAATTACAAATTCATTCTCAATTGCCAACTTCTAGTGATTCTACATTTCCTATAGTTGAGGTGAGAGAATTGTGTAGTGGGATCGTTCAC
GTAACGTTGATTAGCAGTGTTGATCGAAACGTCATGCTTAATGAAATCATTGGTGTCGTTGAAGAGGAAGGTGGTGAAGTTGCTAAAATTTCTAGGGTTGGAATAGAGAC
GTCGAGAGTAGAAAAAAGATTGAAGCATTTGATAATTGAAGCTCGAGAAGATGGACGAGATAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAGCCCGGCATCGATGGCGGAGCTTCGATCAAACTCGATCGTAAAATCGTCGAGAAAAACCGAAGAATTCATATGAAATCGCTGTGTTCTAAGCTCTTCAATCT
TGTTCCTTCCTCCCATTACAAAATTTCTAAGGATTTGCTATCCCAACAGACCCAAATCTCATACGTGATTGCTTACATAAAAGAGCTGAAAGAAAGAGTGGAGAGTTTGG
AGAAAAGGAAGGAAGCTTTACAATTACAAATTCATTCTCAATTGCCAACTTCTAGTGATTCTACATTTCCTATAGTTGAGGTGAGAGAATTGTGTAGTGGGATCGTTCAC
GTAACGTTGATTAGCAGTGTTGATCGAAACGTCATGCTTAATGAAATCATTGGTGTCGTTGAAGAGGAAGGTGGTGAAGTTGCTAAAATTTCTAGGGTTGGAATAGAGAC
GTCGAGAGTAGAAAAAAGATTGAAGCATTTGATAATTGAAGCTCGAGAAGATGGACGAGATAAGTAA
Protein sequenceShow/hide protein sequence
MAKPGIDGGASIKLDRKIVEKNRRIHMKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFPIVEVRELCSGIVH
VTLISSVDRNVMLNEIIGVVEEEGGEVAKISRVGIETSRVEKRLKHLIIEAREDGRDK