CuGenDBv2

Gene ID	Carg06770
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RPM1-interacting protein 4-like
Genome location	Carg_Chr18:1162739..1165215
RNA-Seq Expression	Carg06770
Synteny	Carg06770
Gene Ontology terms	NA
InterPro domains	IPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site IPR040387 - RPM1-interacting protein 4/NOI4

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004152507.2 protein NOI4 [Cucumis sativus]

1.3e-29

81.58

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Query:  MAPQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG
        MA QDKGR LPKFG+WDVNNPASAEGFTVIFNKAR+EKKTTG+ ANMV  + NEP +NNES+PQ PPPKKRWFCCG
Subjt:  MAPQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG

XP_008439256.1 PREDICTED: RPM1-interacting protein 4 isoform X1 [Cucumis melo]

1.5e-30

82.89

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Query:  MAPQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG
        MA QD+GRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG+ ANMV  + NEP +NNES+PQ PPPKKRWFCCG
Subjt:  MAPQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG

XP_022954832.1 RPM1-interacting protein 4-like [Cucurbita moschata]

3.7e-37

100

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Query:  MAPQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG
        MAPQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG
Subjt:  MAPQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG

XP_022994173.1 RPM1-interacting protein 4-like [Cucurbita maxima]

3.1e-36

98.68

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Query:  MAPQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG
        MAPQDKG PLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG
Subjt:  MAPQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG

XP_038894676.1 protein NOI4 isoform X1 [Benincasa hispida]

7.4e-30

82.89

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Query:  MAPQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG
        MA QDKGRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG+ AN V  Q +EP +NNES+PQ PPPKKRWFCCG
Subjt:  MAPQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LRE5 AvrRpt-cleavage domain-containing protein

6.1e-30

81.58

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Query:  MAPQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG
        MA QDKGR LPKFG+WDVNNPASAEGFTVIFNKAR+EKKTTG+ ANMV  + NEP +NNES+PQ PPPKKRWFCCG
Subjt:  MAPQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG

A0A1S3AYE6 RPM1-interacting protein 4 isoform X2

2.3e-29

83.33

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Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG
        D+GRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG+ ANMV  + NEP +NNES+PQ PPPKKRWFCCG
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG

A0A1S3AZ04 RPM1-interacting protein 4 isoform X1

7.2e-31

82.89

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Query:  MAPQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG
        MA QD+GRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG+ ANMV  + NEP +NNES+PQ PPPKKRWFCCG
Subjt:  MAPQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG

A0A6J1GRZ4 RPM1-interacting protein 4-like

1.8e-37

100

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Query:  MAPQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG
        MAPQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG
Subjt:  MAPQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG

A0A6J1K4F5 RPM1-interacting protein 4-like

1.5e-36

98.68

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Query:  MAPQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG
        MAPQDKG PLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG
Subjt:  MAPQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG

SwissProt top hits

e value

%identity

Alignment

O22633 Protein NOI4

4.4e-17

61.97

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Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCC
        DKGRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT G   +    +S+E    +     S P  K+W CC
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCC

Q8GYN5 RPM1-interacting protein 4

2.7e-06

45.9

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Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQS
        +K   +PKFG+WD NNP+SA+G+T IFNK R+E+    S AN VS  S  P + +   P +
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQS

Arabidopsis top hits

e value

%identity

Alignment

AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein

6.9e-18

63.38

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Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCC
        DKGRPLPKFGEWDVN+P+SAEGFTVIFNKAR+EKK  G      S   +EP YN        P KK WFCC
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCC

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein

1.9e-15

62.69

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Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKR
        DKGRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT G   +   S S     +    P  P P K+
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKR

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein

1.4e-15

61.76

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Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKR
        +DKGRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT G   +   S S     +    P  P P K+
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKR

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein

2.4e-18

61.11

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Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCC
        +DKGRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT G   +    +S+E    +     S P  K+W CC
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCC

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein

5.3e-18

60.53

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Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKT---TGSVAN-MVSSQSNEPA-YNNESFPQSPPPKKRWFC
        ++KG+PLPKFGEWDVNNPASAEGFTVIF+KA DEKKT   +G+  N +VS Q N+ +  NN    Q+P  K +WFC
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKT---TGSVAN-MVSSQSNEPA-YNNESFPQSPPPKKRWFC

Sequences

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CDS sequence

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ATGGCACCGCAGGACAAGGGTCGTCCACTGCCGAAGTTCGGGGAATGGGATGTAAATAATCCTGCATCTGCTGAGGGATTTACGGTCATATTTAACAAGGCTAGAGATGA
GAAGAAGACTACTGGAAGTGTTGCCAATATGGTTTCTTCACAAAGTAATGAGCCTGCCTACAACAATGAAAGTTTCCCTCAGTCTCCTCCACCAAAGAAGAGGTGGTTTT
GCTGTGGTTGA

mRNA sequence

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AATGTTTTTGAGATCACTTGGGGAAGTTGAAACGACGTGAATCCCACGTTATCTTGCGTGTCGTTTCGATTTCAATTCTCTTTTGGGGGGCGTTTGATTCGCTGGGTTGG
AGGTTTGATAAGAAATCACTGACGATTTGTTTTCTTTTCGTTTTTGTTTTCCTCGTATCCGATCCACCGCCCTGCGTCCTGCGATCATGGCACCGCAGGACAAGGGTCGT
CCACTGCCGAAGTTCGGGGAATGGGATGTAAATAATCCTGCATCTGCTGAGGGATTTACGGTCATATTTAACAAGGCTAGAGATGAGAAGAAGACTACTGGAAGTGTTGC
CAATATGGTTTCTTCACAAAGTAATGAGCCTGCCTACAACAATGAAAGTTTCCCTCAGTCTCCTCCACCAAAGAAGAGGTGGTTTTGCTGTGGTTGATGCCACCACAGTG
GTTTCAGGGTCTTGACTTATGTAATCCATTGTGAAAGCCCGTAAGATTTGAGGGCCCTATCCAACGGTGGATCACTGGATCACAACATAGTTGTTGCGCCAAAAAATGAC
TCATATTATTCCTTTTTCCTTTTCACTTTGGCTTTCACGCTTCATTGACGTTATATAATAATGTTTATCACATGTTATTCTGTATTTGCATTGTAATACAGAATGGAAAG
GATAAATTCCATTGTCGAGATCTTTTTTCAATTTCATGATGATGATCTTTATGTGGACCTATGGTGGAAGGATTCTGATGGGAACTTTCTATAAATTAGCTGCTTTGTTT
T

Protein sequence

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MAPQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG

Carg06770 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome