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Carg06807 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06807
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDUF4408 domain-containing protein
Genome locationCarg_Chr18:1380110..1380595
RNA-Seq ExpressionCarg06807
SyntenyCarg06807
Gene Ontology termsGO:0008643 - carbohydrate transport (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573141.1 hypothetical protein SDJN03_27028, partial [Cucurbita argyrosperma subsp. sororia]1.2e-82100Show/hide
Query:  MALTNIKTRSSMITNILCFLVALFFILLLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDGTLIVGGDENRGLKICHDDD
        MALTNIKTRSSMITNILCFLVALFFILLLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDGTLIVGGDENRGLKICHDDD
Subjt:  MALTNIKTRSSMITNILCFLVALFFILLLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDGTLIVGGDENRGLKICHDDD

Query:  EWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNRVNG
        EWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNRVNG
Subjt:  EWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNRVNG

KAG7012326.1 hypothetical protein SDJN02_25078, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-82100Show/hide
Query:  MALTNIKTRSSMITNILCFLVALFFILLLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDGTLIVGGDENRGLKICHDDD
        MALTNIKTRSSMITNILCFLVALFFILLLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDGTLIVGGDENRGLKICHDDD
Subjt:  MALTNIKTRSSMITNILCFLVALFFILLLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDGTLIVGGDENRGLKICHDDD

Query:  EWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNRVNG
        EWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNRVNG
Subjt:  EWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNRVNG

KGN64433.2 hypothetical protein Csa_013667 [Cucumis sativus]2.8e-2656.29Show/hide
Query:  MALTNIKTRSS----------MITNIL---CFLVALFFIL---LLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDG---
        M LT I+T SS          +I NIL   CFL AL +IL    LF P SNY INFPTP  VFI+GNLIVV+LIGESKVF+S + D F  ++CFYDG   
Subjt:  MALTNIKTRSS----------MITNIL---CFLVALFFIL---LLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDG---

Query:  -TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEA
         TL+  GD  R  +   ++DEWE+   N E+LSKRADDFIARVNMQR+IEA
Subjt:  -TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEA

XP_008446247.1 PREDICTED: uncharacterized protein LOC103489033 [Cucumis melo]3.5e-2949.7Show/hide
Query:  SSMITNI--LCFLVALFFILLLFLPL------------------SNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDG----TLIV
        +++I NI  L FL ALF  LL  +PL                   NY INFPTP  VFI+GNLIVV+LIGESK+F+S + D F  ++CFY G    T + 
Subjt:  SSMITNI--LCFLVALFFILLLFLPL------------------SNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDG----TLIV

Query:  GGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK
         GD+ R  +   ++DEWE+   N E+LSKRADDFIARVNMQR+IEA ++ +CC++ TTK +YRKK
Subjt:  GGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK

XP_011660360.1 uncharacterized protein LOC105436383 [Cucumis sativus]7.5e-3254.12Show/hide
Query:  MALTNIKTRSS----------MITNIL---CFLVALFFIL---LLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDG---
        M LT I+T SS          +I NIL   CFL AL +IL    LF P SNY INFPTP  VFI+GNLIVV+LIGESKVF+S + D F  ++CFYDG   
Subjt:  MALTNIKTRSS----------MITNIL---CFLVALFFIL---LLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDG---

Query:  -TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK
         TL+  GD  R  +   ++DEWE+   N E+LSKRADDFIARVNMQR+IEA ++ +CC++ T K +Y KK
Subjt:  -TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK

TrEMBL top hitse value%identityAlignment
A0A0A0LWQ9 Uncharacterized protein3.6e-3254.12Show/hide
Query:  MALTNIKTRSS----------MITNIL---CFLVALFFIL---LLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDG---
        M LT I+T SS          +I NIL   CFL AL +IL    LF P SNY INFPTP  VFI+GNLIVV+LIGESKVF+S + D F  ++CFYDG   
Subjt:  MALTNIKTRSS----------MITNIL---CFLVALFFIL---LLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDG---

Query:  -TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK
         TL+  GD  R  +   ++DEWE+   N E+LSKRADDFIARVNMQR+IEA ++ +CC++ T K +Y KK
Subjt:  -TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK

A0A1S3BFF3 uncharacterized protein LOC1034890331.7e-2949.7Show/hide
Query:  SSMITNI--LCFLVALFFILLLFLPL------------------SNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDG----TLIV
        +++I NI  L FL ALF  LL  +PL                   NY INFPTP  VFI+GNLIVV+LIGESK+F+S + D F  ++CFY G    T + 
Subjt:  SSMITNI--LCFLVALFFILLLFLPL------------------SNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDG----TLIV

Query:  GGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK
         GD+ R  +   ++DEWE+   N E+LSKRADDFIARVNMQR+IEA ++ +CC++ TTK +YRKK
Subjt:  GGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK

A0A5A7UM42 Protoheme IX farnesyltransferase1.7e-2949.7Show/hide
Query:  SSMITNI--LCFLVALFFILLLFLPL------------------SNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDG----TLIV
        +++I NI  L FL ALF  LL  +PL                   NY INFPTP  VFI+GNLIVV+LIGESK+F+S + D F  ++CFY G    T + 
Subjt:  SSMITNI--LCFLVALFFILLLFLPL------------------SNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDG----TLIV

Query:  GGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK
         GD+ R  +   ++DEWE+   N E+LSKRADDFIARVNMQR+IEA ++ +CC++ TTK +YRKK
Subjt:  GGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK

A0A6J1CA01 uncharacterized protein LOC1110088103.0e-1845.24Show/hide
Query:  NIKTRSSMITNILCFLVAL-----FFILLLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFA--DNLCFYDGTL------IVGGDENR
        NI   + + + +L FL AL     FFI    LP    S N PT  SVF++GNLIV VL+GESK+F+ K+ D     D+ C +DG+        +  D + 
Subjt:  NIKTRSSMITNILCFLVAL-----FFILLLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFA--DNLCFYDGTL------IVGGDENR

Query:  GLKICHDDDEWEM-GLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNR
        G +I    DEWEM  L + E+LS+RADDFIARVNMQR+IEA+IL + CE  T   KYR++ + CL  R
Subjt:  GLKICHDDDEWEM-GLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNR

V4TA27 DUF4408 domain-containing protein7.4e-0934.3Show/hide
Query:  IKTRSSMITNILCFLVALFFILL------LFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSS--------DFFADNL----------CFYDG
        I + +++  ++ CF    F  LL      LF+ L    +   +P  +F +GNLI+++LIGESK FAS+SS        D+ + +           C  + 
Subjt:  IKTRSSMITNILCFLVALFFILL------LFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSS--------DFFADNL----------CFYDG

Query:  TLIVGGD--ENRGLKICHDDDEWEMGLEN------------CEDLSKRADDFIARVNMQREIEASILCFCCE
            G D  EN  ++   D++E E+G EN             E+LSKRADDFIARVN QR +EA +L  C E
Subjt:  TLIVGGD--ENRGLKICHDDDEWEMGLEN------------CEDLSKRADDFIARVNMQREIEASILCFCCE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTTACAAACATCAAAACAAGATCTTCAATGATTACAAACATCCTCTGTTTTCTTGTTGCTCTGTTTTTCATCCTCTTATTGTTCCTTCCATTATCCAATTACTC
AATAAATTTCCCAACACCCATTTCCGTTTTCATCATCGGCAATCTGATCGTTGTCGTTCTCATTGGAGAATCCAAAGTTTTTGCTTCAAAAAGTTCGGATTTTTTTGCTG
ATAATCTCTGTTTTTACGATGGAACATTGATTGTCGGAGGAGATGAAAACAGGGGTTTGAAGATTTGTCATGATGATGATGAATGGGAGATGGGTTTGGAGAATTGTGAG
GATTTGAGTAAAAGAGCCGATGATTTCATTGCTAGAGTGAATATGCAGAGAGAAATTGAAGCTTCGATACTCTGTTTTTGTTGTGAATTGAAGACGACGAAGAACAAATA
TAGAAAGAAAGCTTTGAAATGTTTGACGAATCGTGTCAATGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTTACAAACATCAAAACAAGATCTTCAATGATTACAAACATCCTCTGTTTTCTTGTTGCTCTGTTTTTCATCCTCTTATTGTTCCTTCCATTATCCAATTACTC
AATAAATTTCCCAACACCCATTTCCGTTTTCATCATCGGCAATCTGATCGTTGTCGTTCTCATTGGAGAATCCAAAGTTTTTGCTTCAAAAAGTTCGGATTTTTTTGCTG
ATAATCTCTGTTTTTACGATGGAACATTGATTGTCGGAGGAGATGAAAACAGGGGTTTGAAGATTTGTCATGATGATGATGAATGGGAGATGGGTTTGGAGAATTGTGAG
GATTTGAGTAAAAGAGCCGATGATTTCATTGCTAGAGTGAATATGCAGAGAGAAATTGAAGCTTCGATACTCTGTTTTTGTTGTGAATTGAAGACGACGAAGAACAAATA
TAGAAAGAAAGCTTTGAAATGTTTGACGAATCGTGTCAATGGCTGA
Protein sequenceShow/hide protein sequence
MALTNIKTRSSMITNILCFLVALFFILLLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDGTLIVGGDENRGLKICHDDDEWEMGLENCE
DLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNRVNG