CuGenDBv2

Gene ID	Carg06811
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein kinase domain-containing protein
Genome location	Carg_Chr18:1412613..1413359
RNA-Seq Expression	Carg06811
Synteny	Carg06811
Gene Ontology terms	GO:0032968 - positive regulation of transcription elongation from RNA polymerase II promoter (biological process) GO:0051726 - regulation of cell cycle (biological process) GO:0070816 - phosphorylation of RNA polymerase II C-terminal domain (biological process) GO:0000307 - cyclin-dependent protein kinase holoenzyme complex (cellular component) GO:0005634 - nucleus (cellular component) GO:0004693 - cyclin-dependent protein serine/threonine kinase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0008353 - RNA polymerase II CTD heptapeptide repeat kinase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6573147.1 putative serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-39

100

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Query:  SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRDTSSRKFMRALKPSIGLSMDLLFR
        SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRDTSSRKFMRALKPSIGLSMDLLFR
Subjt:  SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRDTSSRKFMRALKPSIGLSMDLLFR

KAG7012330.1 hypothetical protein SDJN02_25082, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.6e-60

100

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Query:  MVHRSVAVVSNRGVYQEGYASLALRFSFSRRPVLPSKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTN
        MVHRSVAVVSNRGVYQEGYASLALRFSFSRRPVLPSKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTN
Subjt:  MVHRSVAVVSNRGVYQEGYASLALRFSFSRRPVLPSKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTN

Query:  RDTSSRKFMRALKPSIGLSMDLLFR
        RDTSSRKFMRALKPSIGLSMDLLFR
Subjt:  RDTSSRKFMRALKPSIGLSMDLLFR

XP_022955253.1 probable serine/threonine-protein kinase At1g54610 [Cucurbita moschata]

1.3e-39

100

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Query:  SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRDTSSRKFMRALKPSIGLSMDLLFR
        SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRDTSSRKFMRALKPSIGLSMDLLFR
Subjt:  SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRDTSSRKFMRALKPSIGLSMDLLFR

XP_022994370.1 probable serine/threonine-protein kinase At1g54610 [Cucurbita maxima]

8.4e-39

97.78

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Query:  SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRDTSSRKFMRALKPSIGLSMDLLFR
        SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRK+TNRDTSSRKF+RALKPSIGLSMDLLFR
Subjt:  SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRDTSSRKFMRALKPSIGLSMDLLFR

XP_023542615.1 probable serine/threonine-protein kinase At1g54610 [Cucurbita pepo subsp. pepo]

1.3e-39

100

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Query:  SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRDTSSRKFMRALKPSIGLSMDLLFR
        SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRDTSSRKFMRALKPSIGLSMDLLFR
Subjt:  SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRDTSSRKFMRALKPSIGLSMDLLFR

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B064 probable serine/threonine-protein kinase At1g54610

5.9e-30

79.79

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Query:  SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRD----TSSRKFMRALKPSIGLSMDLLFR
        SKSEKFPPPHQDGAVGYPPH+TSQRGH SFGAAD SFSSSIFSSKS SIK++ AP GPSRRK+ ++D    +SSRKF+RALKPSIGLS+DLLFR
Subjt:  SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRD----TSSRKFMRALKPSIGLSMDLLFR

A0A5A7UHP9 Putative serine/threonine-protein kinase

5.9e-30

79.79

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Query:  SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRD----TSSRKFMRALKPSIGLSMDLLFR
        SKSEKFPPPHQDGAVGYPPH+TSQRGH SFGAAD SFSSSIFSSKS SIK++ AP GPSRRK+ ++D    +SSRKF+RALKPSIGLS+DLLFR
Subjt:  SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRD----TSSRKFMRALKPSIGLSMDLLFR

A0A5D3BMA2 Putative serine/threonine-protein kinase

5.9e-30

79.79

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Query:  SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRD----TSSRKFMRALKPSIGLSMDLLFR
        SKSEKFPPPHQDGAVGYPPH+TSQRGH SFGAAD SFSSSIFSSKS SIK++ AP GPSRRK+ ++D    +SSRKF+RALKPSIGLS+DLLFR
Subjt:  SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRD----TSSRKFMRALKPSIGLSMDLLFR

A0A6J1GTF3 probable serine/threonine-protein kinase At1g54610

6.3e-40

100

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Query:  SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRDTSSRKFMRALKPSIGLSMDLLFR
        SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRDTSSRKFMRALKPSIGLSMDLLFR
Subjt:  SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRDTSSRKFMRALKPSIGLSMDLLFR

A0A6J1K111 probable serine/threonine-protein kinase At1g54610

4.1e-39

97.78

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Query:  SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRDTSSRKFMRALKPSIGLSMDLLFR
        SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRK+TNRDTSSRKF+RALKPSIGLSMDLLFR
Subjt:  SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRDTSSRKFMRALKPSIGLSMDLLFR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G50860.1 Protein kinase superfamily protein

9.3e-12

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Query:  SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSES----IKTTGAPEGPSRRKRTNRD----TSSRKFMRALK--PSIGLSMDLLFR
        SKSEKFPPPHQDGAVGYP  + S++             +S+F +K+E+     ++  + EG S RK +N+D     SSRK++  LK  P++GLSMDLLFR
Subjt:  SKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSES----IKTTGAPEGPSRRKRTNRD----TSSRKFMRALK--PSIGLSMDLLFR

Sequences

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CDS sequence

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ATGGTACACCGGTCTGTCGCAGTAGTGTCCAACCGGGGCGTATACCAGGAAGGCTACGCCTCCCTCGCTCTAAGATTCTCATTTAGCCGAAGACCTGTCTTACCCAGCAA
GAGCGAGAAGTTTCCCCCACCCCATCAAGATGGGGCAGTAGGGTATCCGCCACACGAGACATCCCAGAGGGGCCATTCATCATTTGGCGCAGCTGATGCTTCATTCAGCT
CCTCAATCTTTAGTTCAAAGTCTGAATCTATCAAAACTACAGGAGCTCCAGAGGGACCTTCCCGGAGAAAGAGAACCAACAGAGATACTTCATCTCGAAAATTCATGCGT
GCACTCAAGCCATCAATCGGGCTATCAATGGATCTGTTGTTTAGA

mRNA sequence

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Protein sequence

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MVHRSVAVVSNRGVYQEGYASLALRFSFSRRPVLPSKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRDTSSRKFMR
ALKPSIGLSMDLLFR

Carg06811 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome