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Carg06841 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06841
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionglycine-rich protein 5
Genome locationCarg_Chr18:1609198..1609575
RNA-Seq ExpressionCarg06841
SyntenyCarg06841
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573180.1 hypothetical protein SDJN03_27067, partial [Cucurbita argyrosperma subsp. sororia]1.3e-36100Show/hide
Query:  MGSFLALKFLCLLVLFALICASEPRRLVGTGGGFGSEKTGYFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGGG
        MGSFLALKFLCLLVLFALICASEPRRLVGTGGGFGSEKTGYFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGGG
Subjt:  MGSFLALKFLCLLVLFALICASEPRRLVGTGGGFGSEKTGYFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGGG

Query:  GGSGVLGGGAGGGGGAGGGFGGGLP
        GGSGVLGGGAGGGGGAGGGFGGGLP
Subjt:  GGSGVLGGGAGGGGGAGGGFGGGLP

XP_022954435.1 glycine-rich protein 5 [Cucurbita moschata]6.7e-3699.2Show/hide
Query:  MGSFLALKFLCLLVLFALICASEPRRLVGTGGGFGSEKTGYFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGGG
        MGSFLALKFLCLLVLFALICASEPRRLVGTGGGFGSEKTGYFQFFPGYG GLGGGGGFGGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGGG
Subjt:  MGSFLALKFLCLLVLFALICASEPRRLVGTGGGFGSEKTGYFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGGG

Query:  GGSGVLGGGAGGGGGAGGGFGGGLP
        GGSGVLGGGAGGGGGAGGGFGGGLP
Subjt:  GGSGVLGGGAGGGGGAGGGFGGGLP

XP_022994117.1 glycine-rich protein 5 [Cucurbita maxima]5.3e-3396.8Show/hide
Query:  MGSFLALKFLCLLVLFALICASEPRRLVGTGGGFGSEKTGYFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGGG
        MGSFLALKFL LLVLFALICASEPRRLVGTGGGFGSEKTGYFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGGG
Subjt:  MGSFLALKFLCLLVLFALICASEPRRLVGTGGGFGSEKTGYFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGGG

Query:  GGSGVLGGGAGGGGGAGGGFGGGLP
         GSGVLGGGA  GGGAGGGFGGGLP
Subjt:  GGSGVLGGGAGGGGGAGGGFGGGLP

XP_023542188.1 glycine-rich protein 23 [Cucurbita pepo subsp. pepo]4.5e-3296.03Show/hide
Query:  MGSFLALKFLCLLVLFALICASEPRRLVGTGGGFGSEKTGYFQFFPGYGGGLGGGGGF-GGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGG
        MGSFLALKFL LLVLFALICASEPRRLVGTGGGFGSEKTGYFQFFPGYG GLGGGGGF GGGGGGGLGGGSGFGSGGG GFGSGIGGLGGGGGGGFGGGG
Subjt:  MGSFLALKFLCLLVLFALICASEPRRLVGTGGGFGSEKTGYFQFFPGYGGGLGGGGGF-GGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGG

Query:  GGGSGVLGGGAGGGGGAGGGFGGGLP
        G GSGVLGGGAGGGGGAGGGFGGGLP
Subjt:  GGGSGVLGGGAGGGGGAGGGFGGGLP

XP_038895952.1 glycine-rich cell wall structural protein-like [Benincasa hispida]9.6e-1982.54Show/hide
Query:  MGSFLALKFLCLLVLFALICASEPRRLVGTGGG-FGSEKTGYFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGG
        MGS LA KFL L+VL ALI ASEPR+LV T GG   SEKT  FQFFPG+GGGLGGGGG+GGGGGGGLGGGSGFGSGGG GFGSGIGGLG GGGGGFGGGG
Subjt:  MGSFLALKFLCLLVLFALICASEPRRLVGTGGG-FGSEKTGYFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGG

Query:  GGGSGVLGGGAGGGGGAGGGFGGGLP
        GGG G+LGGGA  GGGAGGGFGGGLP
Subjt:  GGGSGVLGGGAGGGGGAGGGFGGGLP

TrEMBL top hitse value%identityAlignment
A0A1S3BEW4 glycine-rich cell wall structural protein4.7e-1984.13Show/hide
Query:  MGSFLALKFLCLLVLFALICASEPRRLVGTGGG-FGSEKTGYFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGG
        MGS LA K+L L+VL ALICASEPRRLV T GG   SEKT  FQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGG GFGSGIGGLG GGGGGFGGGG
Subjt:  MGSFLALKFLCLLVLFALICASEPRRLVGTGGG-FGSEKTGYFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGG

Query:  GGGSGVLGGGAGGGGGAGGGFGGGLP
        GG  G+LGGGAGGGG  GGGFGGGLP
Subjt:  GGGSGVLGGGAGGGGGAGGGFGGGLP

A0A5D3BMG3 Glycine-rich cell wall structural protein4.7e-1984.13Show/hide
Query:  MGSFLALKFLCLLVLFALICASEPRRLVGTGGG-FGSEKTGYFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGG
        MGS LA K+L L+VL ALICASEPRRLV T GG   SEKT  FQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGG GFGSGIGGLG GGGGGFGGGG
Subjt:  MGSFLALKFLCLLVLFALICASEPRRLVGTGGG-FGSEKTGYFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGG

Query:  GGGSGVLGGGAGGGGGAGGGFGGGLP
        GG  G+LGGGAGGGG  GGGFGGGLP
Subjt:  GGGSGVLGGGAGGGGGAGGGFGGGLP

A0A6J1GSE7 glycine-rich protein 53.2e-3699.2Show/hide
Query:  MGSFLALKFLCLLVLFALICASEPRRLVGTGGGFGSEKTGYFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGGG
        MGSFLALKFLCLLVLFALICASEPRRLVGTGGGFGSEKTGYFQFFPGYG GLGGGGGFGGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGGG
Subjt:  MGSFLALKFLCLLVLFALICASEPRRLVGTGGGFGSEKTGYFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGGG

Query:  GGSGVLGGGAGGGGGAGGGFGGGLP
        GGSGVLGGGAGGGGGAGGGFGGGLP
Subjt:  GGSGVLGGGAGGGGGAGGGFGGGLP

A0A6J1JUT9 glycine-rich protein 52.6e-3396.8Show/hide
Query:  MGSFLALKFLCLLVLFALICASEPRRLVGTGGGFGSEKTGYFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGGG
        MGSFLALKFL LLVLFALICASEPRRLVGTGGGFGSEKTGYFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGGG
Subjt:  MGSFLALKFLCLLVLFALICASEPRRLVGTGGGFGSEKTGYFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGGG

Query:  GGSGVLGGGAGGGGGAGGGFGGGLP
         GSGVLGGGA  GGGAGGGFGGGLP
Subjt:  GGSGVLGGGAGGGGGAGGGFGGGLP

E5GC63 Uncharacterized protein4.7e-1984.13Show/hide
Query:  MGSFLALKFLCLLVLFALICASEPRRLVGTGGG-FGSEKTGYFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGG
        MGS LA K+L L+VL ALICASEPRRLV T GG   SEKT  FQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGG GFGSGIGGLG GGGGGFGGGG
Subjt:  MGSFLALKFLCLLVLFALICASEPRRLVGTGGG-FGSEKTGYFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGG

Query:  GGGSGVLGGGAGGGGGAGGGFGGGLP
        GG  G+LGGGAGGGG  GGGFGGGLP
Subjt:  GGGSGVLGGGAGGGGGAGGGFGGGLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTTTTTTGGCTTTGAAATTCCTCTGCCTGCTGGTTCTGTTTGCACTAATCTGTGCCTCCGAGCCCAGAAGGCTTGTTGGCACTGGGGGAGGGTTTGGAAGTGA
AAAGACAGGCTATTTCCAGTTCTTTCCTGGTTATGGCGGTGGGCTCGGCGGTGGTGGAGGGTTTGGTGGTGGTGGCGGCGGTGGATTAGGTGGTGGTTCGGGCTTTGGCA
GTGGAGGTGGAGCGGGATTTGGGTCTGGAATTGGTGGGCTTGGCGGTGGTGGAGGTGGAGGGTTCGGCGGTGGTGGTGGTGGTGGCAGTGGCGTTTTAGGTGGCGGAGCT
GGAGGTGGAGGAGGAGCTGGCGGTGGATTTGGAGGTGGACTGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCTTTTTTGGCTTTGAAATTCCTCTGCCTGCTGGTTCTGTTTGCACTAATCTGTGCCTCCGAGCCCAGAAGGCTTGTTGGCACTGGGGGAGGGTTTGGAAGTGA
AAAGACAGGCTATTTCCAGTTCTTTCCTGGTTATGGCGGTGGGCTCGGCGGTGGTGGAGGGTTTGGTGGTGGTGGCGGCGGTGGATTAGGTGGTGGTTCGGGCTTTGGCA
GTGGAGGTGGAGCGGGATTTGGGTCTGGAATTGGTGGGCTTGGCGGTGGTGGAGGTGGAGGGTTCGGCGGTGGTGGTGGTGGTGGCAGTGGCGTTTTAGGTGGCGGAGCT
GGAGGTGGAGGAGGAGCTGGCGGTGGATTTGGAGGTGGACTGCCTTGA
Protein sequenceShow/hide protein sequence
MGSFLALKFLCLLVLFALICASEPRRLVGTGGGFGSEKTGYFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGGGGGSGVLGGGA
GGGGGAGGGFGGGLP