; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg06851 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06851
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein of unknown function, DUF584
Genome locationCarg_Chr18:1665179..1665730
RNA-Seq ExpressionCarg06851
SyntenyCarg06851
Gene Ontology termsGO:0005829 - cytosol (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR007608 - Senescence regulator S40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573190.1 hypothetical protein SDJN03_27077, partial [Cucurbita argyrosperma subsp. sororia]3.1e-98100Show/hide
Query:  MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRGARGRHLAASAPMN
        MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRGARGRHLAASAPMN
Subjt:  MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRGARGRHLAASAPMN

Query:  VPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG
        VPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG
Subjt:  VPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG

XP_022954487.1 uncharacterized protein LOC111456739 [Cucurbita moschata]1.1e-9598.36Show/hide
Query:  MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRGARGRHLAASAPMN
        MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDE NVGGVSIAFQDSNR ARGRHLAASAPMN
Subjt:  MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRGARGRHLAASAPMN

Query:  VPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG
        VPDW KILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG
Subjt:  VPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG

XP_022994200.1 uncharacterized protein LOC111490009 [Cucurbita maxima]1.6e-9496.72Show/hide
Query:  MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRGARGRHLAASAPMN
        MAKGRKLGINR+ERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNR ARGRH+AASAPMN
Subjt:  MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRGARGRHLAASAPMN

Query:  VPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG
        VPDW KILRAESVESLPE DGGGYYNNDE DMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG
Subjt:  VPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG

XP_023542780.1 uncharacterized protein LOC111802588 [Cucurbita pepo subsp. pepo]4.9e-9698.36Show/hide
Query:  MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRGARGRHLAASAPMN
        MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNR ARGRHLAASAPMN
Subjt:  MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRGARGRHLAASAPMN

Query:  VPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG
        VPDW KILRAESVESLPEMDGGGYYNNDE DMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG
Subjt:  VPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG

XP_038894790.1 uncharacterized protein LOC120083209 [Benincasa hispida]9.6e-7676.65Show/hide
Query:  MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDE---SMTVRNRRRSTPLDEPNVGGVSIAFQDSNR-----------
        MAKGRKLGINRNERFLGSY NGY QGS  GD+SSE REEDVW++IDN NS +GEDE   ++TVR RRRSTP DE  VGGVSIAF+DS R           
Subjt:  MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDE---SMTVRNRRRSTPLDEPNVGGVSIAFQDSNR-----------

Query:  GARGRHLAASAPMNVPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG
          RGRH++ASAP+NVPDW KILRAE VESLPEMD GGYYNNDE +MVPPHEYLAREYARSRN AAATSV EGVGRTLKGRDMRRVRDAVW+QTGFDG
Subjt:  GARGRHLAASAPMNVPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG

TrEMBL top hitse value%identityAlignment
A0A0A0LU86 Uncharacterized protein7.0e-7275.51Show/hide
Query:  MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDE---SMTVRNRRRSTPLDEPNVGGVSIAFQDS----------NRG
        MAKGRKLGINRNERFLGSY NG+ Q S  GD+SSE REEDVW++IDN NS + EDE   ++T+R RRRSTP DE NVGGVSIAFQDS             
Subjt:  MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDE---SMTVRNRRRSTPLDEPNVGGVSIAFQDS----------NRG

Query:  ARGRHLAASAPMNVPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG
         RGRH++ASAP+NVPDW KIL AES  SL EMD GGYYNNDET+MVPPHEYLAREYARSRNTAAATSV EGVGRTLKGRDMRRVRDAVWSQTGFDG
Subjt:  ARGRHLAASAPMNVPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG

A0A1S3B268 uncharacterized protein LOC1034853229.7e-7476.65Show/hide
Query:  MAKGRKLGINRNERFLGSY-GNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDE---SMTVRNRRRSTPLDEPNVGGVSIAFQDS----------NR
        MAKGRKLGINRNERFLGSY  NG+ QGS  GD+SSE REEDVW++IDN NS +GEDE   ++TVR RRRSTP DE ++GGVSIAFQDS            
Subjt:  MAKGRKLGINRNERFLGSY-GNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDE---SMTVRNRRRSTPLDEPNVGGVSIAFQDS----------NR

Query:  GARGRHLAASAPMNVPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG
          RGRH++ASAP+NVPDW KIL AESVESL EMD GGYYNNDET+MVPPHEYLAREYARSRNTAAATSV EGVGRTLKGRDMRRVRDAVWSQTGFDG
Subjt:  GARGRHLAASAPMNVPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG

A0A5A7UP29 Uncharacterized protein9.7e-7476.65Show/hide
Query:  MAKGRKLGINRNERFLGSY-GNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDE---SMTVRNRRRSTPLDEPNVGGVSIAFQDS----------NR
        MAKGRKLGINRNERFLGSY  NG+ QGS  GD+SSE REEDVW++IDN NS +GEDE   ++TVR RRRSTP DE ++GGVSIAFQDS            
Subjt:  MAKGRKLGINRNERFLGSY-GNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDE---SMTVRNRRRSTPLDEPNVGGVSIAFQDS----------NR

Query:  GARGRHLAASAPMNVPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG
          RGRH++ASAP+NVPDW KIL AESVESL EMD GGYYNNDET+MVPPHEYLAREYARSRNTAAATSV EGVGRTLKGRDMRRVRDAVWSQTGFDG
Subjt:  GARGRHLAASAPMNVPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG

A0A6J1GR42 uncharacterized protein LOC1114567395.3e-9698.36Show/hide
Query:  MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRGARGRHLAASAPMN
        MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDE NVGGVSIAFQDSNR ARGRHLAASAPMN
Subjt:  MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRGARGRHLAASAPMN

Query:  VPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG
        VPDW KILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG
Subjt:  VPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG

A0A6J1K0K9 uncharacterized protein LOC1114900097.6e-9596.72Show/hide
Query:  MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRGARGRHLAASAPMN
        MAKGRKLGINR+ERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNR ARGRH+AASAPMN
Subjt:  MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRGARGRHLAASAPMN

Query:  VPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG
        VPDW KILRAESVESLPE DGGGYYNNDE DMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG
Subjt:  VPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11700.1 Protein of unknown function, DUF5842.4e-3243.46Show/hide
Query:  MAKGRKLGINRNERFLG-SYGNGYGQGSNKGDESSEFREEDVWA--------MIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRGAR--
        MA+GRKL ++++ER+LG SY  G   G++  DE SE  EED+W+        M+++  + N  D    VRN R          GG+S+AF+D++   R  
Subjt:  MAKGRKLGINRNERFLG-SYGNGYGQGSNKGDESSEFREEDVWA--------MIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRGAR--

Query:  -------------------GRHLAASAPMNVPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAR-EYARSRNTAAATSVLEGVGRTLKGRDMR
                            R LA+SAP+NVPDW KI R  SVES+ E D       D   M+PPHEYLA+ +  RSR +    SV EGVGRTLKGR++R
Subjt:  -------------------GRHLAASAPMNVPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAR-EYARSRNTAAATSVLEGVGRTLKGRDMR

Query:  RVRDAVWSQTGFDG
        RVRDA+WSQTGF G
Subjt:  RVRDAVWSQTGFDG

AT1G61930.1 Protein of unknown function, DUF5841.4e-3245.63Show/hide
Query:  MAKGRK-LGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDS---------------
        MAKGRK   +NR++R+LGSY  G   G++  DE  E  EED+W+     + T   +ES    N  R+T      VGG+S+AF+ S               
Subjt:  MAKGRK-LGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDS---------------

Query:  -NRGARG----RHLAASAPMNVPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYA-RSRNT-AAATSVLEGVGRTLKGRDMRRVRDAVWS
           G  G    R LA+SAP+NVPDW KI R +SVES+ E+D      ++E+ M+PPHEYLA+  A RSR       SV +GVGRTLKGR++RRVRDA+WS
Subjt:  -NRGARG----RHLAASAPMNVPDWRKILRAESVESLPEMDGGGYYNNDETDMVPPHEYLAREYA-RSRNT-AAATSVLEGVGRTLKGRDMRRVRDAVWS

Query:  QTGFDG
        QTGF G
Subjt:  QTGFDG

AT4G04630.1 Protein of unknown function, DUF5843.1e-1637.87Show/hide
Query:  KGDESSEFREEDVWAM------------IDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRGARGRHLAASAPMNVPDWRKIL-RAESVES
        +GDE  EF+EEDVW++            I  S+ ++    S +  N RRS       V GV                 +SAPMNVPDW K+   ++S   
Subjt:  KGDESSEFREEDVWAM------------IDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRGARGRHLAASAPMNVPDWRKIL-RAESVES

Query:  LPEMDGGGYYNNDETD---MVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGF
           +      ++DE D   MVPPHE++AR+ AR++   ++ S+ EGVGRTLKGRD+ +VR+AV S+TGF
Subjt:  LPEMDGGGYYNNDETD---MVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGF

AT4G21930.1 Protein of unknown function, DUF5847.2e-2945.03Show/hide
Query:  MAKGRKLGINRNERFLGSYGNGYGQG-SNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRR--RSTPLDEPNVGGVSIAFQDSNRGARGRHLAASA
        M KGR L I+R+ERFLGS+          +     E  EEDVW++++       E + +   N R   ++  +    GG        + G R RH+A SA
Subjt:  MAKGRKLGINRNERFLGSYGNGYGQG-SNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRR--RSTPLDEPNVGGVSIAFQDSNRGARGRHLAASA

Query:  PMNVPDWRKILRAESVESL----PEMDGGGYYNND-ETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG
        P+ VPDW KIL+ ESV+S+     + D     + D E+ MVPPHEY+A   ARSRN    +SV  GVGRTLKGRDMRRVRDAVWSQTGF G
Subjt:  PMNVPDWRKILRAESVESL----PEMDGGGYYNND-ETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG

AT5G60680.1 Protein of unknown function, DUF5844.1e-1635.14Show/hide
Query:  MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRGARGRHLAASAPMN
        MA G+      + RFLG+    Y   S+ G    EF E D++  I + +       S +VR+ ++S+  + P+    + A             A+S P+N
Subjt:  MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRGARGRHLAASAPMN

Query:  VPDWRKILRAESVE----SLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGF
        VPDW KILR E  +    S+ + D     N D  D +PPHE+LA      +   A+ SV EGVGRTLKGRD+ RVR+A++ + GF
Subjt:  VPDWRKILRAESVE----SLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAGGACGGAAGTTGGGTATAAACAGGAACGAGCGGTTTCTCGGGAGCTATGGAAATGGATACGGTCAAGGCTCCAATAAAGGAGATGAATCATCGGAGTTTCG
TGAAGAAGATGTGTGGGCGATGATTGACAACAGCAATTCAACCAACGGTGAGGATGAGAGCATGACAGTAAGAAATCGCCGGAGATCAACACCGCTTGATGAACCAAACG
TCGGCGGAGTTTCGATTGCTTTTCAAGACTCCAACAGGGGGGCACGTGGACGGCACTTAGCGGCATCGGCTCCGATGAACGTGCCGGACTGGAGAAAGATTCTGAGGGCG
GAATCGGTGGAGTCACTACCGGAGATGGACGGAGGAGGTTACTACAACAACGATGAGACGGATATGGTGCCGCCGCATGAGTATTTGGCGAGGGAATACGCGAGGAGCCG
GAATACTGCGGCGGCGACATCGGTTTTGGAGGGCGTCGGGAGGACACTGAAAGGGAGAGATATGAGAAGGGTTCGGGATGCGGTTTGGAGTCAGACCGGGTTCGATGGTT
AA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAGGACGGAAGTTGGGTATAAACAGGAACGAGCGGTTTCTCGGGAGCTATGGAAATGGATACGGTCAAGGCTCCAATAAAGGAGATGAATCATCGGAGTTTCG
TGAAGAAGATGTGTGGGCGATGATTGACAACAGCAATTCAACCAACGGTGAGGATGAGAGCATGACAGTAAGAAATCGCCGGAGATCAACACCGCTTGATGAACCAAACG
TCGGCGGAGTTTCGATTGCTTTTCAAGACTCCAACAGGGGGGCACGTGGACGGCACTTAGCGGCATCGGCTCCGATGAACGTGCCGGACTGGAGAAAGATTCTGAGGGCG
GAATCGGTGGAGTCACTACCGGAGATGGACGGAGGAGGTTACTACAACAACGATGAGACGGATATGGTGCCGCCGCATGAGTATTTGGCGAGGGAATACGCGAGGAGCCG
GAATACTGCGGCGGCGACATCGGTTTTGGAGGGCGTCGGGAGGACACTGAAAGGGAGAGATATGAGAAGGGTTCGGGATGCGGTTTGGAGTCAGACCGGGTTCGATGGTT
AA
Protein sequenceShow/hide protein sequence
MAKGRKLGINRNERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRGARGRHLAASAPMNVPDWRKILRA
ESVESLPEMDGGGYYNNDETDMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG