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Carg06852 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06852
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDetected protein of confused Function
Genome locationCarg_Chr18:1674066..1674470
RNA-Seq ExpressionCarg06852
SyntenyCarg06852
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573192.1 hypothetical protein SDJN03_27079, partial [Cucurbita argyrosperma subsp. sororia]1.9e-4991.74Show/hide
Query:  MGIMMKRKQNGYSRMEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPSCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIGLCNQFQQL
        MGIMMKRKQNGYSR+EKEDPEEKRHRQALFLIYKIMEQAS    NGNGNGNGNRRRPSCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIGLCNQFQQL
Subjt:  MGIMMKRKQNGYSRMEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPSCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIGLCNQFQQL

Query:  TTCKSALRRQPKVESY-FPHL
        TTC SALRRQPKVE   FP L
Subjt:  TTCKSALRRQPKVESY-FPHL

KAG6584084.1 hypothetical protein SDJN03_20016, partial [Cucurbita argyrosperma subsp. sororia]2.5e-2864.17Show/hide
Query:  MGIMMKRKQNGYSRMEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPSCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIGLCNQFQQL
        M  ++ R+QNGYSRMEKEDPEEK+HRQA FLIYKIMEQA+          +G+RRR SCLRIR RK KLRIGRRLKKLKK MSM + TARIG+C QF QL
Subjt:  MGIMMKRKQNGYSRMEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPSCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIGLCNQFQQL

Query:  TTCKSALRRQPKVESYFPHL
         TCKS   R  +    FP L
Subjt:  TTCKSALRRQPKVESYFPHL

KAG7012370.1 hypothetical protein SDJN02_25122, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-66100Show/hide
Query:  MGIMMKRKQNGYSRMEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPSCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIGLCNQFQQL
        MGIMMKRKQNGYSRMEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPSCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIGLCNQFQQL
Subjt:  MGIMMKRKQNGYSRMEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPSCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIGLCNQFQQL

Query:  TTCKSALRRQPKVESYFPHLSDVDRYQLSIVISI
        TTCKSALRRQPKVESYFPHLSDVDRYQLSIVISI
Subjt:  TTCKSALRRQPKVESYFPHLSDVDRYQLSIVISI

XP_022140046.1 uncharacterized protein LOC111010796 [Momordica charantia]2.2e-2964.46Show/hide
Query:  MGIMMKRKQNGYSRMEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPSCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIGLCNQFQQL
        M +++ RKQ+GYSRMEKEDPEEK+HR+A FLIYKIMEQA+          +G+RRRP+CLRIR RK KLRIGRRLKKL+K MS  LSTARIG+C Q  QL
Subjt:  MGIMMKRKQNGYSRMEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPSCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIGLCNQFQQL

Query:  TTCKSALRRQPKVESY-FPHL
         TCKS   R  KVE+  FP L
Subjt:  TTCKSALRRQPKVESY-FPHL

XP_023542186.1 uncharacterized protein LOC111802152 [Cucurbita pepo subsp. pepo]1.3e-4594.39Show/hide
Query:  MEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPSCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIGLCNQFQQLTTCKSALRRQPKVE
        MEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPSCLRIR RKLKLRIGRRLKKLKKGMSMCLSTARIGLCNQFQQL TCKSALRRQPKVE
Subjt:  MEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPSCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIGLCNQFQQLTTCKSALRRQPKVE

Query:  SY-FPHL
        +  FP L
Subjt:  SY-FPHL

TrEMBL top hitse value%identityAlignment
A0A0A0LUT4 Uncharacterized protein1.5e-2663.72Show/hide
Query:  IMMKRKQNGYSRMEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPSCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIGLCNQFQQLTT
        +M  R+  GYS+MEKEDP+EK+HRQA FLIYKIMEQAS          NG++RRPSCLRIR RK KLR+GRR KK+KK M+M  STARIG+CNQF QL +
Subjt:  IMMKRKQNGYSRMEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPSCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIGLCNQFQQLTT

Query:  CKSALRRQPKVES
        CKS L  + KVE+
Subjt:  CKSALRRQPKVES

A0A540M3N5 Uncharacterized protein4.0e-1647.15Show/hide
Query:  MGIMMKRKQNGYSRMEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPSCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIGLCNQ-FQQ
        M + +++    YS+M+KEDPEE  HR+A FLIYK+M+Q               RRRPS LRIR RKLKL+IGRRLKKL+K M + +S AR+ +  Q F Q
Subjt:  MGIMMKRKQNGYSRMEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPSCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIGLCNQ-FQQ

Query:  LTTCKSALRR--QPKVESYFPHL
        L TCK+   R  Q  + +  P L
Subjt:  LTTCKSALRR--QPKVESYFPHL

A0A5N5FDB7 Uncharacterized protein4.0e-1648.18Show/hide
Query:  MGIMMKRKQNGYSRMEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPSCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIGLCNQ-FQQ
        M +M+++   GYS+++KEDPE+  HR+A FLIYK+++QA              RRRPS LRIR RKLK++IGRRLKKL+K M + +STAR+ +  + F Q
Subjt:  MGIMMKRKQNGYSRMEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPSCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIGLCNQ-FQQ

Query:  LTTCKSALRR
        L TC +   R
Subjt:  LTTCKSALRR

A0A6J1CEK3 uncharacterized protein LOC1110107961.1e-2964.46Show/hide
Query:  MGIMMKRKQNGYSRMEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPSCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIGLCNQFQQL
        M +++ RKQ+GYSRMEKEDPEEK+HR+A FLIYKIMEQA+          +G+RRRP+CLRIR RK KLRIGRRLKKL+K MS  LSTARIG+C Q  QL
Subjt:  MGIMMKRKQNGYSRMEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPSCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIGLCNQFQQL

Query:  TTCKSALRRQPKVESY-FPHL
         TCKS   R  KVE+  FP L
Subjt:  TTCKSALRRQPKVESY-FPHL

A0A6J1KG77 uncharacterized protein LOC1114954861.7e-2763.33Show/hide
Query:  MGIMMKRKQNGYSRMEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPSCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIGLCNQFQQL
        M  ++ R+QNGYSRMEKEDPEEK+HRQA FLIYKIMEQA+          +G RRR SCLRIR RK KLRIGRRLKKLKK MSM   TAR G+C QF QL
Subjt:  MGIMMKRKQNGYSRMEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPSCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIGLCNQFQQL

Query:  TTCKSALRRQPKVESYFPHL
         TCKS   R  +    FP L
Subjt:  TTCKSALRRQPKVESYFPHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11655.1 unknown protein3.1e-0539.76Show/hide
Query:  YSRMEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRP--SCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIG
        YS+M+KEDPEE   R+A FLIYK +++A             +RR P  S +R++   LK++IG+RL KL++ +   +S  R G
Subjt:  YSRMEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRP--SCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIG

AT4G04745.1 unknown protein7.4e-0740.24Show/hide
Query:  MGIMMKRKQNGYSRMEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPS--CLRIRARKLKLRIGRRLKKLKK
        M +M+K     Y++MEKEDP+E  HR+A FLI K++E+A     +     +  RRR S   + IR   +++RIG++L+KL+K
Subjt:  MGIMMKRKQNGYSRMEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPS--CLRIRARKLKLRIGRRLKKLKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATTATGATGAAACGCAAGCAAAATGGGTACTCAAGAATGGAGAAGGAAGACCCAGAAGAGAAAAGGCACAGACAAGCTCTGTTCTTGATTTACAAGATAATGGA
GCAGGCAAGCAATGGCAATGGCAATGGCAATGGCAATGGCAATGGCAACAGGAGGAGGCCTTCTTGTCTCAGAATCAGAGCACGAAAGCTTAAGCTAAGGATTGGAAGGA
GGTTGAAGAAGCTGAAGAAGGGCATGTCAATGTGTTTGTCCACAGCAAGAATTGGGCTCTGCAACCAATTTCAACAGCTTACAACTTGTAAGAGCGCGCTGCGGCGACAA
CCCAAGGTGGAATCTTACTTCCCCCATTTGTCCGACGTAGATCGATATCAATTATCGATCGTGATTTCAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTATTATGATGAAACGCAAGCAAAATGGGTACTCAAGAATGGAGAAGGAAGACCCAGAAGAGAAAAGGCACAGACAAGCTCTGTTCTTGATTTACAAGATAATGGA
GCAGGCAAGCAATGGCAATGGCAATGGCAATGGCAATGGCAATGGCAACAGGAGGAGGCCTTCTTGTCTCAGAATCAGAGCACGAAAGCTTAAGCTAAGGATTGGAAGGA
GGTTGAAGAAGCTGAAGAAGGGCATGTCAATGTGTTTGTCCACAGCAAGAATTGGGCTCTGCAACCAATTTCAACAGCTTACAACTTGTAAGAGCGCGCTGCGGCGACAA
CCCAAGGTGGAATCTTACTTCCCCCATTTGTCCGACGTAGATCGATATCAATTATCGATCGTGATTTCAATCTGA
Protein sequenceShow/hide protein sequence
MGIMMKRKQNGYSRMEKEDPEEKRHRQALFLIYKIMEQASNGNGNGNGNGNGNRRRPSCLRIRARKLKLRIGRRLKKLKKGMSMCLSTARIGLCNQFQQLTTCKSALRRQ
PKVESYFPHLSDVDRYQLSIVISI