; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg06865 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06865
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDRT111 protein
Genome locationCarg_Chr20:571370..573844
RNA-Seq ExpressionCarg06865
SyntenyCarg06865
Gene Ontology termsGO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0005730 - nucleolus (cellular component)
InterPro domainsIPR027973 - Protein of unknown function DUF4602


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570433.1 Proteasome adapter and scaffold protein ECM29, partial [Cucurbita argyrosperma subsp. sororia]2.7e-7598.69Show/hide
Query:  MHSRDKSAKAGSSRNSMDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTAS
        MHSRDKSAKAGSSRNS DMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGK QKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTAS
Subjt:  MHSRDKSAKAGSSRNSMDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTAS

Query:  SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGK
        SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGK
Subjt:  SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGK
KAG7010308.1 hypothetical protein SDJN02_27101 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-87100Show/hide
Query:  MHSRDKSAKAGSSRNSMDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTAS
        MHSRDKSAKAGSSRNSMDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTAS
Subjt:  MHSRDKSAKAGSSRNSMDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTAS

Query:  SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
        SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
Subjt:  SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
XP_022944773.1 uncharacterized protein LOC111449125 [Cucurbita moschata]6.8e-8799.43Show/hide
Query:  MHSRDKSAKAGSSRNSMDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTAS
        MHSRDKSAKAGSSRNS DMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTAS
Subjt:  MHSRDKSAKAGSSRNSMDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTAS

Query:  SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
        SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
Subjt:  SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
XP_022985670.1 uncharacterized protein LOC111483659 [Cucurbita maxima]2.4e-8497.16Show/hide
Query:  MHSRDKSAKAGSSRNSMDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTAS
        MHSRDKSAKAGSSRNS DMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPI+KKQKEREQKMVQEHWNVSQFGG AS
Subjt:  MHSRDKSAKAGSSRNSMDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTAS

Query:  SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
        SNHSRNSLGKRKPE QVLKSSEGFFKHGVLDVKHLLRPAPSRNSD GNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
Subjt:  SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
XP_023511857.1 uncharacterized protein LOC111776750 [Cucurbita pepo subsp. pepo]3.7e-8597.73Show/hide
Query:  MHSRDKSAKAGSSRNSMDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTAS
        MHSRDKSAKAGSSRNS D+EPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGG AS
Subjt:  MHSRDKSAKAGSSRNSMDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTAS

Query:  SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
        SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDV HLLRPAPSRNSDFGNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
Subjt:  SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
TrEMBL top hitse value%identityAlignment
A0A0A0KEY3 Uncharacterized protein2.2e-7081.91Show/hide
Query:  MHSRDKSAKAGSSRNSMDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTAS
        MHSRDK AKAGSSR+S DME  M MRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEH +V QFGG AS
Subjt:  MHSRDKSAKAGSSRNSMDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTAS

Query:  SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPA------------PSRNSDFGNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
        S++SR S GKR+PE QVLKSSEGFFKHGVLDVKHLLRP+            P RN+DFGNEM G GRRKGGKKKNNKS KKGGGKKRH
Subjt:  SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPA------------PSRNSDFGNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
A0A1S3BNE0 uncharacterized protein LOC1034914573.3e-7182.45Show/hide
Query:  MHSRDKSAKAGSSRNSMDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTAS
        MHSRDK AKAGSSR+S DME  M MRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEH +V QFGG AS
Subjt:  MHSRDKSAKAGSSRNSMDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTAS

Query:  SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPA------------PSRNSDFGNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
        S++SR S GKR+PE QVLKSSEGFFKHGVLDVKHLLRP+            P RN+DFGNEM GKGRRKGGKKKNNKS KKGGGKKRH
Subjt:  SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPA------------PSRNSDFGNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
A0A6J1DHM3 uncharacterized protein LOC1110205771.6e-5772.28Show/hide
Query:  MHSRDKSAKAGSSRNSMDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTAS
        MH RDKS + GSS  S D+EP MN+RNI KEI FLTSSHMSWKDKKEIE+RKIVSLGGKPQKKQ+LPLSVARPIMKKQKEREQKM++E  N+    G +S
Subjt:  MHSRDKSAKAGSSRNSMDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTAS

Query:  SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPAPS--------RNSDFGNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
         N+SR S+GKRKPE+QVL+ SEG F++GVLDVKHLL  AP+        RN+DFGN+M GKGRRKGGKKK NKS KKGGGKKRH
Subjt:  SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPAPS--------RNSDFGNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
A0A6J1FZ06 uncharacterized protein LOC1114491253.3e-8799.43Show/hide
Query:  MHSRDKSAKAGSSRNSMDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTAS
        MHSRDKSAKAGSSRNS DMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTAS
Subjt:  MHSRDKSAKAGSSRNSMDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTAS

Query:  SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
        SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
Subjt:  SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
A0A6J1JBZ2 uncharacterized protein LOC1114836591.2e-8497.16Show/hide
Query:  MHSRDKSAKAGSSRNSMDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTAS
        MHSRDKSAKAGSSRNS DMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPI+KKQKEREQKMVQEHWNVSQFGG AS
Subjt:  MHSRDKSAKAGSSRNSMDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTAS

Query:  SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
        SNHSRNSLGKRKPE QVLKSSEGFFKHGVLDVKHLLRPAPSRNSD GNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
Subjt:  SNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G44820.1 unknown protein1.5e-3149.42Show/hide
Query:  MNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKSSE
        ++ +NI K++    SSHM+WKDKK +E +K+ +LGGK QK  RLPLSVAR  MKKQK+RE+KM++++  + +FGG  SS+  + +  KR PE +VLKS+ 
Subjt:  MNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKSSE

Query:  GFFKHGVLDVKHLLRPAPSRNSD-------------------FGNEMAGKGRRKGGKKKNNKSNKKGGGKKR
        G FK GVLDVKHLLR  PS +SD                    G  +  KG++KGGK K NK  KKGGGKKR
Subjt:  GFFKHGVLDVKHLLRPAPSRNSD-------------------FGNEMAGKGRRKGGKKKNNKSNKKGGGKKR
AT2G44820.2 unknown protein1.5e-3149.42Show/hide
Query:  MNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKSSE
        ++ +NI K++    SSHM+WKDKK +E +K+ +LGGK QK  RLPLSVAR  MKKQK+RE+KM++++  + +FGG  SS+  + +  KR PE +VLKS+ 
Subjt:  MNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKSSE

Query:  GFFKHGVLDVKHLLRPAPSRNSD-------------------FGNEMAGKGRRKGGKKKNNKSNKKGGGKKR
        G FK GVLDVKHLLR  PS +SD                    G  +  KG++KGGK K NK  KKGGGKKR
Subjt:  GFFKHGVLDVKHLLRPAPSRNSD-------------------FGNEMAGKGRRKGGKKKNNKSNKKGGGKKR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTCCAGAGATAAAAGTGCAAAAGCGGGATCATCTAGGAACTCGATGGATATGGAACCTGTAATGAACATGCGAAATATTAAGAAAGAAATTGAATTCCTCACCTC
CTCTCATATGTCATGGAAAGACAAAAAGGAGATTGAGAGTAGGAAAATTGTTTCTTTGGGTGGAAAGCCTCAAAAGAAACAAAGATTGCCTCTAAGTGTAGCACGACCAA
TCATGAAGAAGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGCATTGGAATGTTAGTCAATTTGGCGGGACGGCTAGTAGTAACCACTCTAGAAACTCGTTGGGGAAG
CGCAAACCCGAGAACCAGGTTCTTAAGTCGAGTGAAGGCTTTTTCAAACACGGTGTGCTTGATGTCAAGCATCTACTACGCCCAGCTCCTTCTAGGAATAGTGACTTCGG
AAACGAAATGGCCGGCAAAGGTAGAAGAAAAGGAGGGAAAAAGAAGAACAACAAAAGTAACAAAAAGGGTGGCGGTAAGAAGCGCCATTGA
mRNA sequenceShow/hide mRNA sequence
CCACTTTTCTTTCTCCTCTTCTTATTTTCACTCTCTGCTGCAACCTTACGCCGCCACGCCAACCCCATCTTCTGCTGCAGCCCCCCATCAATCGTGATAAGATGCATTCC
AGAGATAAAAGTGCAAAAGCGGGATCATCTAGGAACTCGATGGATATGGAACCTGTAATGAACATGCGAAATATTAAGAAAGAAATTGAATTCCTCACCTCCTCTCATAT
GTCATGGAAAGACAAAAAGGAGATTGAGAGTAGGAAAATTGTTTCTTTGGGTGGAAAGCCTCAAAAGAAACAAAGATTGCCTCTAAGTGTAGCACGACCAATCATGAAGA
AGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGCATTGGAATGTTAGTCAATTTGGCGGGACGGCTAGTAGTAACCACTCTAGAAACTCGTTGGGGAAGCGCAAACCC
GAGAACCAGGTTCTTAAGTCGAGTGAAGGCTTTTTCAAACACGGTGTGCTTGATGTCAAGCATCTACTACGCCCAGCTCCTTCTAGGAATAGTGACTTCGGAAACGAAAT
GGCCGGCAAAGGTAGAAGAAAAGGAGGGAAAAAGAAGAACAACAAAAGTAACAAAAAGGGTGGCGGTAAGAAGCGCCATTGAAATCATTCATCACCTACAACATTCCTGT
TTTACAATGGAATATGGATATCCTTTTGTCATATCAGATGCAATTCAATGAAATCTTGCATACCCTTGTTTTGCATATAAATTTATTACGTCCATCTATCCATTGAATGA
AATTTTTATTTTGATTTTGTTTTTTTGTTGGATTGGAACCCATTTGTACTTTTCGGCTTCATCTTGCCTTTTTACTTTTTTGTCGAGCTCCATCTTCTTTGTCGGGAAAG
CATGAAAGACGCATTTTAAAGCCTTGAGAGAAAGCTTGAAAGGGAAAGCCCAATCTGTGATATCCCACATTGGTTGGAGAGGAGAATGAAACACCAGAGTGTGAAAACCT
TTCTCTAGCAGACCTTTC
Protein sequenceShow/hide protein sequence
MHSRDKSAKAGSSRNSMDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGK
RKPENQVLKSSEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGKGRRKGGKKKNNKSNKKGGGKKRH