; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg06888 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06888
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGibberellin regulated protein
Genome locationCarg_Chr20:441182..441895
RNA-Seq ExpressionCarg06888
SyntenyCarg06888
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570409.1 Protein GAST1, partial [Cucurbita argyrosperma subsp. sororia]4.8e-51100Show/hide
Query:  MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKT
        MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKT
Subjt:  MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKT

Query:  KR
        KR
Subjt:  KR

XP_022153040.1 protein GAST1-like [Momordica charantia]2.3e-4074.07Show/hide
Query:  MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKT
        MA++S+ LLL L  M L  TH QAA+S E A  SS++YG T+G+L+P+ECGGRCT RCSAT+FKKPCM FC+KCCA CLCVPPGTYGNKQMCPCYNNWKT
Subjt:  MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKT

Query:  KRGGPKCP
        KRGGPKCP
Subjt:  KRGGPKCP

XP_022944307.1 gibberellin-regulated protein 5-like [Cucurbita moschata]1.9e-55100Show/hide
Query:  MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKT
        MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKT
Subjt:  MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKT

Query:  KRGGPKCP
        KRGGPKCP
Subjt:  KRGGPKCP

XP_022985831.1 protein GAST1-like [Cucurbita maxima]9.4e-5599.07Show/hide
Query:  MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKT
        MATLSTFLLLCLA MLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKT
Subjt:  MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKT

Query:  KRGGPKCP
        KRGGPKCP
Subjt:  KRGGPKCP

XP_023511912.1 protein GAST1-like [Cucurbita pepo subsp. pepo]1.4e-5397.22Show/hide
Query:  MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKT
        MATLSTFLLLC A MLLSSTHIQAA SIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKT
Subjt:  MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKT

Query:  KRGGPKCP
        KRGGPKCP
Subjt:  KRGGPKCP

TrEMBL top hitse value%identityAlignment
A0A6J1DFN7 protein GAST1-like1.1e-4074.07Show/hide
Query:  MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKT
        MA++S+ LLL L  M L  TH QAA+S E A  SS++YG T+G+L+P+ECGGRCT RCSAT+FKKPCM FC+KCCA CLCVPPGTYGNKQMCPCYNNWKT
Subjt:  MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKT

Query:  KRGGPKCP
        KRGGPKCP
Subjt:  KRGGPKCP

A0A6J1FVD8 gibberellin-regulated protein 5-like9.2e-56100Show/hide
Query:  MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKT
        MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKT
Subjt:  MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKT

Query:  KRGGPKCP
        KRGGPKCP
Subjt:  KRGGPKCP

A0A6J1J9B2 protein GAST1-like4.6e-5599.07Show/hide
Query:  MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKT
        MATLSTFLLLCLA MLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKT
Subjt:  MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKT

Query:  KRGGPKCP
        KRGGPKCP
Subjt:  KRGGPKCP

A0A6P6TQ32 protein GAST1-like4.4e-3464.91Show/hide
Query:  MATLSTFLLLCLAFMLLSSTHIQAA------ASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPC
        MAT +TF LLCLAF+LL     QA+      +  +    +++ YG T+GSLRP+ECG RC  RCS T++KKPCM+FC+KCCAKCLCVPPGTYGNKQ+CPC
Subjt:  MATLSTFLLLCLAFMLLSSTHIQAA------ASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPC

Query:  YNNWKTKRGGPKCP
        YNNWKTKRGGPKCP
Subjt:  YNNWKTKRGGPKCP

A0A7C9AK22 Uncharacterized protein1.5e-3468.87Show/hide
Query:  STFLLLCLAFMLLSSTHIQAA--ASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR
        S  LLLC+  ML+     QAA  ++      S  MYG TQGSL P+ECGGRCT RCSAT +KKPC+ FC KCCAKCLCVPPGTYGNKQ+CPCYNNWKTKR
Subjt:  STFLLLCLAFMLLSSTHIQAA--ASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR

Query:  GGPKCP
        GGPKCP
Subjt:  GGPKCP

SwissProt top hitse value%identityAlignment
P27057 Protein GAST13.2e-2953.57Show/hide
Query:  MATLSTFLLLCLAFMLLSSTHIQAAASI----ETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYN
        MA   + +L  L  + L+   +  A  +    +    ++++YG ++G L P++C  +CT RCS TS+KKPCM FC+KCCAKCLCVP GTYGNKQ CPCYN
Subjt:  MATLSTFLLLCLAFMLLSSTHIQAAASI----ETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYN

Query:  NWKTKRGGPKCP
        NWKTKRGGPKCP
Subjt:  NWKTKRGGPKCP

P47926 Protein RSI-15.6e-2676.56Show/hide
Query:  LRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP
        LRP +C  RCT RCSATS KKPCM FC+KCCA CLCVP G YGNKQ CPCYNNWKT+ G PKCP
Subjt:  LRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP

Q6GKX7 Gibberellin-regulated protein 123.3e-2656.38Show/hide
Query:  LLSSTHIQAAASIETAVASSKMY-GGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP
        LL +T       +E+   +  ++  G +GSL+PEEC   C  RCSATS +KPC+ FC KCC KCLCVP GTYG+K+ CPCYNNW TK GGPKCP
Subjt:  LLSSTHIQAAASIETAVASSKMY-GGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP

Q6NMQ7 Gibberellin-regulated protein 66.0e-2857.14Show/hide
Query:  LSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRG
        +++FLLL + F  +  T        + A    + YG   GSL+  +CGG+CT RCS T + KPCM FC+KCCAKCLCVPPGTYGNKQ+CPCYNNWKT++G
Subjt:  LSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRG

Query:  GPKCP
        GPKCP
Subjt:  GPKCP

Q84J95 Gibberellin-regulated protein 51.1e-2656.73Show/hide
Query:  STFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGG
        +    L L F+L  S  +QAA             GG  G L+P++C  +C+ RCSATS KKPCM FC KCC KCLCVPPGT+GNKQ CPCYNNWKTK G 
Subjt:  STFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGG

Query:  PKCP
        PKCP
Subjt:  PKCP

Arabidopsis top hitse value%identityAlignment
AT1G74670.1 Gibberellin-regulated family protein4.3e-2957.14Show/hide
Query:  LSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRG
        +++FLLL + F  +  T        + A    + YG   GSL+  +CGG+CT RCS T + KPCM FC+KCCAKCLCVPPGTYGNKQ+CPCYNNWKT++G
Subjt:  LSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRG

Query:  GPKCP
        GPKCP
Subjt:  GPKCP

AT2G30810.1 Gibberellin-regulated family protein2.3e-2756.38Show/hide
Query:  LLSSTHIQAAASIETAVASSKMY-GGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP
        LL +T       +E+   +  ++  G +GSL+PEEC   C  RCSATS +KPC+ FC KCC KCLCVP GTYG+K+ CPCYNNW TK GGPKCP
Subjt:  LLSSTHIQAAASIETAVASSKMY-GGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP

AT3G02885.1 GAST1 protein homolog 58.0e-2856.73Show/hide
Query:  STFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGG
        +    L L F+L  S  +QAA             GG  G L+P++C  +C+ RCSATS KKPCM FC KCC KCLCVPPGT+GNKQ CPCYNNWKTK G 
Subjt:  STFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGG

Query:  PKCP
        PKCP
Subjt:  PKCP

AT3G10185.1 Gibberellin-regulated family protein7.5e-2654.87Show/hide
Query:  MAT-LSTFLLLCLAFMLLSSTH----IQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCY
        MAT LS  +   +   LL S H    I   A  ET  A   +           ECG RC  RCS T +KKPC+ FC KCC KCLCVPPGTYGNKQ+CPCY
Subjt:  MAT-LSTFLLLCLAFMLLSSTH----IQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCY

Query:  NNWKTKRGGPKCP
        NNWKTK GGPKCP
Subjt:  NNWKTKRGGPKCP

AT5G15230.2 GAST1 protein homolog 43.2e-2461.33Show/hide
Query:  SSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP
        S K YG   GSL+  +C   C  RC  T + K C+ FC KCC KCLCVPPG YGNKQ+C CYNNWKT+ GGPKCP
Subjt:  SSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCCTTTCCACCTTCCTCCTCCTCTGCCTTGCCTTCATGCTTCTTTCATCCACACACATTCAGGCCGCCGCTAGCATTGAAACAGCAGTAGCGTCGTCAAAGAT
GTATGGCGGCACCCAGGGCAGCCTCCGTCCGGAAGAATGCGGGGGGCGGTGCACGGTGCGGTGCTCGGCAACGTCGTTCAAGAAGCCGTGTATGGTGTTCTGCAGAAAGT
GCTGTGCGAAGTGCTTGTGCGTTCCTCCCGGCACCTATGGGAATAAGCAGATGTGCCCTTGCTATAACAATTGGAAGACCAAGCGCGGTGGCCCGAAATGCCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTACCCTTTCCACCTTCCTCCTCCTCTGCCTTGCCTTCATGCTTCTTTCATCCACACACATTCAGGCCGCCGCTAGCATTGAAACAGCAGTAGCGTCGTCAAAGAT
GTATGGCGGCACCCAGGGCAGCCTCCGTCCGGAAGAATGCGGGGGGCGGTGCACGGTGCGGTGCTCGGCAACGTCGTTCAAGAAGCCGTGTATGGTGTTCTGCAGAAAGT
GCTGTGCGAAGTGCTTGTGCGTTCCTCCCGGCACCTATGGGAATAAGCAGATGTGCCCTTGCTATAACAATTGGAAGACCAAGCGCGGTGGCCCGAAATGCCCCTAG
Protein sequenceShow/hide protein sequence
MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP