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Carg06937 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06937
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane protein
Genome locationCarg_Chr20:192497..192871
RNA-Seq ExpressionCarg06937
SyntenyCarg06937
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570356.1 hypothetical protein SDJN03_29271, partial [Cucurbita argyrosperma subsp. sororia]7.7e-61100Show/hide
Query:  MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAIL
        MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAIL
Subjt:  MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAIL

Query:  LVFLLYVISHQSHYHRRWFPFGYR
        LVFLLYVISHQSHYHRRWFPFGYR
Subjt:  LVFLLYVISHQSHYHRRWFPFGYR

XP_007014761.1 PREDICTED: uncharacterized protein LOC18589643 [Theobroma cacao]1.5e-3263.93Show/hide
Query:  MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAIL
        MARYY   R  +L+YL+LPPL LC F  IL  V+ FSWYI Y+S  ED I QLK FL+  P++LLLL+H  S  +PFL+PLPEQ+SLHR GGSPWGVA+L
Subjt:  MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAIL

Query:  LVFLLYVISHQSHYHRRWFPFG
        LVFLLY+IS+QS +H RWFP G
Subjt:  LVFLLYVISHQSHYHRRWFPFG

XP_012462541.1 PREDICTED: uncharacterized protein LOC105782384 [Gossypium raimondii]4.9e-3161.48Show/hide
Query:  MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAIL
        MARYY   R  Y++YL+LPPL LC F  IL  V+ FSWY+ Y+S LED + QLK FL+  P++LLLLLH  S  +P L+P PE++SLHRAGGSPWGVA++
Subjt:  MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAIL

Query:  LVFLLYVISHQSHYHRRWFPFG
        LV LLY+IS+QS++H RWFPFG
Subjt:  LVFLLYVISHQSHYHRRWFPFG

XP_021278994.1 uncharacterized protein LOC110412707 [Herrania umbratica]3.4e-3263.93Show/hide
Query:  MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAIL
        MARYY   R  +L+YL+LPPL LCVF  IL  V+ FSWYI Y+S  ED I QLK FL+  P++LLLL+H  S  +PFL+PLPEQ+SLHRAGGSPWGVA++
Subjt:  MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAIL

Query:  LVFLLYVISHQSHYHRRWFPFG
        LVFLLY+IS+QS +  RWFP G
Subjt:  LVFLLYVISHQSHYHRRWFPFG

XP_022756288.1 uncharacterized protein LOC111304026 [Durio zibethinus]2.6e-3264.17Show/hide
Query:  MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAIL
        MARYY   RY +L+YL+ PP+ LC+F  IL  V+ FSWYI Y+S  ED I QLK FL+  PL+LL+L+H LS  +PFL+PLPEQ+SLHRAGGSPWGVA++
Subjt:  MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAIL

Query:  LVFLLYVISHQSHYHRRWFP
        LVFLLY+IS+QS +H RWFP
Subjt:  LVFLLYVISHQSHYHRRWFP

TrEMBL top hitse value%identityAlignment
A0A061GR99 Uncharacterized protein7.4e-3363.93Show/hide
Query:  MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAIL
        MARYY   R  +L+YL+LPPL LC F  IL  V+ FSWYI Y+S  ED I QLK FL+  P++LLLL+H  S  +PFL+PLPEQ+SLHR GGSPWGVA+L
Subjt:  MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAIL

Query:  LVFLLYVISHQSHYHRRWFPFG
        LVFLLY+IS+QS +H RWFP G
Subjt:  LVFLLYVISHQSHYHRRWFPFG

A0A0A0KZ55 Uncharacterized protein2.7e-5187.9Show/hide
Query:  MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAIL
        MARY YY+RYPYLEYLTLPPLQLCVF  ILL+VMAFSWY FY SFLED IFQLKLFLLTVPLLLLLLLHLLS G  FL+PLPEQ+SLHRAGGSPWGVAIL
Subjt:  MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAIL

Query:  LVFLLYVISHQSHYHRRWFPFGYR
        LVF LYVISHQSHYH+RWFPFGYR
Subjt:  LVFLLYVISHQSHYHRRWFPFGYR

A0A5J5NVD3 Uncharacterized protein2.4e-3161.48Show/hide
Query:  MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAIL
        MARYY   R  Y++YL+LPPL LC F  IL  V+ FSWY+ Y+S LED + QLK FL+  P++LLLLLH  S  +P L+P PE++SLHRAGGSPWGVA++
Subjt:  MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAIL

Query:  LVFLLYVISHQSHYHRRWFPFG
        LV LLY+IS+QS++H RWFPFG
Subjt:  LVFLLYVISHQSHYHRRWFPFG

A0A6J0ZX76 uncharacterized protein LOC1104127071.6e-3263.93Show/hide
Query:  MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAIL
        MARYY   R  +L+YL+LPPL LCVF  IL  V+ FSWYI Y+S  ED I QLK FL+  P++LLLL+H  S  +PFL+PLPEQ+SLHRAGGSPWGVA++
Subjt:  MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAIL

Query:  LVFLLYVISHQSHYHRRWFPFG
        LVFLLY+IS+QS +  RWFP G
Subjt:  LVFLLYVISHQSHYHRRWFPFG

A0A6P5ZU06 uncharacterized protein LOC1113040261.3e-3264.17Show/hide
Query:  MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAIL
        MARYY   RY +L+YL+ PP+ LC+F  IL  V+ FSWYI Y+S  ED I QLK FL+  PL+LL+L+H LS  +PFL+PLPEQ+SLHRAGGSPWGVA++
Subjt:  MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAIL

Query:  LVFLLYVISHQSHYHRRWFP
        LVFLLY+IS+QS +H RWFP
Subjt:  LVFLLYVISHQSHYHRRWFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G31940.1 unknown protein1.6e-1949.53Show/hide
Query:  PLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLS----LG--LPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSH
        PL LCVF  ILL+ +  SWY  Y+  +E   +Q KL L+  PLLLLL +H LS    +G  +  L+ L E+ SL+RAGG+PWGVA +LVFL +++S+QS 
Subjt:  PLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLS----LG--LPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQSH

Query:  YHRRWFP
        +  RWFP
Subjt:  YHRRWFP

AT5G19875.1 unknown protein2.3e-2650.82Show/hide
Query:  MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAIL
        MAR  YY    YL+YL+LP   LC    ++  V++F+WY+ ++S +ED +  LKL  +  PL LLLL+H  S GL F VP PEQ+S+HRAG SPWGVA +
Subjt:  MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAIL

Query:  LVFLLYVISHQSHYHRRWFPFG
        LV +L+++S+QS +  RWFPFG
Subjt:  LVFLLYVISHQSHYHRRWFPFG

AT5G42146.1 unknown protein1.4e-0734.26Show/hide
Query:  PPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLL------HLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQS
        PPL L     I+ L++  S Y  Y   +E     LKLF+L +P+L + +L      H L     + V   +  SL   G  PWGV ++L+ LL ++S QS
Subjt:  PPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLL------HLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISHQS

Query:  HYHRRWFP
        ++H  W+P
Subjt:  HYHRRWFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGATACTACTACTACCACCGGTACCCTTACTTGGAGTACTTGACGTTGCCTCCTCTGCAGCTGTGCGTGTTCGGTGGGATCCTGCTGCTGGTGATGGCCTTCTC
ATGGTATATTTTCTACGACTCCTTTCTTGAGGACATCATCTTCCAACTCAAGCTCTTCCTTCTCACCGTGCCCTTGCTTTTGCTGCTGCTCCTCCACCTGCTCTCCCTCG
GCCTCCCTTTTCTCGTCCCCTTGCCGGAGCAGAATTCCCTCCACCGCGCCGGCGGCTCACCCTGGGGCGTCGCCATTCTCCTCGTCTTCCTTCTCTACGTCATCTCTCAC
CAGTCCCATTACCACCGTCGCTGGTTCCCTTTCGGGTATAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGATACTACTACTACCACCGGTACCCTTACTTGGAGTACTTGACGTTGCCTCCTCTGCAGCTGTGCGTGTTCGGTGGGATCCTGCTGCTGGTGATGGCCTTCTC
ATGGTATATTTTCTACGACTCCTTTCTTGAGGACATCATCTTCCAACTCAAGCTCTTCCTTCTCACCGTGCCCTTGCTTTTGCTGCTGCTCCTCCACCTGCTCTCCCTCG
GCCTCCCTTTTCTCGTCCCCTTGCCGGAGCAGAATTCCCTCCACCGCGCCGGCGGCTCACCCTGGGGCGTCGCCATTCTCCTCGTCTTCCTTCTCTACGTCATCTCTCAC
CAGTCCCATTACCACCGTCGCTGGTTCCCTTTCGGGTATAGATAA
Protein sequenceShow/hide protein sequence
MARYYYYHRYPYLEYLTLPPLQLCVFGGILLLVMAFSWYIFYDSFLEDIIFQLKLFLLTVPLLLLLLLHLLSLGLPFLVPLPEQNSLHRAGGSPWGVAILLVFLLYVISH
QSHYHRRWFPFGYR