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Carg06955 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06955
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein FAM110A like
Genome locationCarg_Chr20:91394..91849
RNA-Seq ExpressionCarg06955
SyntenyCarg06955
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040078.1 uncharacterized protein E6C27_scaffold366G00480 [Cucumis melo var. makuwa]1.8e-5980.79Show/hide
Query:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAAAGGATVG
        MNQ VLLRSPP TRQQPLL DKS NR+KEK RFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKK WNKRGKRR I K+N     AG    G
Subjt:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAAAGGATVG

Query:  KEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
        KE    D EKEDWGESLPSSYLSSED+ELEKEMW++FYG GF RTPSQRET
Subjt:  KEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET

KAG6570325.1 hypothetical protein SDJN03_29240, partial [Cucurbita argyrosperma subsp. sororia]6.3e-81100Show/hide
Query:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAAAGGATVG
        MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAAAGGATVG
Subjt:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAAAGGATVG

Query:  KEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
        KEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
Subjt:  KEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET

XP_022943329.1 uncharacterized protein LOC111448127 [Cucurbita moschata]1.3e-7898.68Show/hide
Query:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAAAGGATVG
        MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNK  AAAGGATVG
Subjt:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAAAGGATVG

Query:  KEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
        KEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
Subjt:  KEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET

XP_022986081.1 uncharacterized protein LOC111483938 [Cucurbita maxima]2.2e-7896.73Show/hide
Query:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAA--AGGAT
        MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAE+AGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWN+RGKRRHITK+NKAAAA  AGGAT
Subjt:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAA--AGGAT

Query:  VGKEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
        VGKEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
Subjt:  VGKEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET

XP_023512462.1 uncharacterized protein LOC111777213 [Cucurbita pepo subsp. pepo]3.4e-7999.34Show/hide
Query:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAAAGGATVG
        MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNK AAAAGGATVG
Subjt:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAAAGGATVG

Query:  KEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
        KEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
Subjt:  KEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET

TrEMBL top hitse value%identityAlignment
A0A0A0L1Q3 Uncharacterized protein7.8e-6181.82Show/hide
Query:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAAAGGATVG
        MNQ VLLRSPP TRQQPLL DKS NR+KEK RFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKK WNKRGKRR I K+N   A AG    G
Subjt:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAAAGGATVG

Query:  KEGPKHD---GEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
        KE   +D   GEKEDWGESLPSSYLSSED+ELEKEMW++FYGTGFWRTPSQRET
Subjt:  KEGPKHD---GEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET

A0A1S3BMC5 uncharacterized protein LOC1034916017.3e-5980.13Show/hide
Query:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAAAGGATVG
        MNQ VLLRSPP TRQQPLL DKS N +KEK RFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKK WNKRGKRR I K+N     AG    G
Subjt:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAAAGGATVG

Query:  KEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
        KE    D EKEDWGESLPSSYLSSED+ELEKEMW++FYG GF RTPSQRET
Subjt:  KEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET

A0A5D3DDP5 Uncharacterized protein8.6e-6080.79Show/hide
Query:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAAAGGATVG
        MNQ VLLRSPP TRQQPLL DKS NR+KEK RFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKK WNKRGKRR I K+N     AG    G
Subjt:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAAAGGATVG

Query:  KEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
        KE    D EKEDWGESLPSSYLSSED+ELEKEMW++FYG GF RTPSQRET
Subjt:  KEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET

A0A6J1FTZ9 uncharacterized protein LOC1114481276.3e-7998.68Show/hide
Query:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAAAGGATVG
        MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNK  AAAGGATVG
Subjt:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAAAGGATVG

Query:  KEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
        KEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
Subjt:  KEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET

A0A6J1JA30 uncharacterized protein LOC1114839381.1e-7896.73Show/hide
Query:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAA--AGGAT
        MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAE+AGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWN+RGKRRHITK+NKAAAA  AGGAT
Subjt:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAA--AGGAT

Query:  VGKEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
        VGKEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
Subjt:  VGKEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27180.1 unknown protein2.0e-2441.36Show/hide
Query:  MNQNVLLRSPPETRQQPLLTDKSP----NRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAAAGG
        M ++V+L+SP     +      SP    +  KE+ +  EVAGG AAECAA+ CC PC+++NL++L VYKVP  +CKKAW +R KRR  T++     A+  
Subjt:  MNQNVLLRSPPETRQQPLLTDKSP----NRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAAAGG

Query:  ATVGKEGPKHDGEKED-------WGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
        A  G E   H    E+       + E   S    ++ V LE EM D+FYG GFWR+PSQ++T
Subjt:  ATVGKEGPKHDGEKED-------WGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET

AT3G11690.1 unknown protein1.1e-1734.3Show/hide
Query:  RQQPL----LTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAAAGGAT-------VGKE
        R+QPL    L+  SP         AE  GGT A CAA+ CC PC ++NLL+L +YKVP G+C++A   R +++ +           G            E
Subjt:  RQQPL----LTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAAAGGAT-------VGKE

Query:  GPKH--------DGEKED-------WGESLPSSYLSSEDVE--------LEKEMWDQFYGTGFWRTPSQRET
           H        D E +D        G+S+ + + + E+ +        LEKEMW++FYG GFWR+PSQRE+
Subjt:  GPKH--------DGEKED-------WGESLPSSYLSSEDVE--------LEKEMWDQFYGTGFWRTPSQRET

AT5G06380.1 unknown protein2.3e-1740.16Show/hide
Query:  AEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAA----AAGGATVGKEGPKHDGEKEDWGESLPSSYLSSEDVEL
        AE  GGT A CAA+C C PCS++NL++L VYK+P GLC++A  +R +R+ + K+    +      GG++     P    ++E+  E    + ++     L
Subjt:  AEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAA----AAGGATVGKEGPKHDGEKEDWGESLPSSYLSSEDVEL

Query:  EKEMWDQFYGTGFWRTPSQRET
        EKEMW +FY  GFWR+ SQ ET
Subjt:  EKEMWDQFYGTGFWRTPSQRET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCAGAACGTCCTCCTCCGATCCCCGCCAGAGACTCGCCAGCAACCACTACTGACAGACAAGTCGCCCAACAGACTTAAGGAAAAGCCGCGGTTCGCGGAGGTGGC
CGGCGGAACGGCCGCGGAGTGCGCGGCAATATGCTGTTGCTTTCCATGCAGCATGATGAACCTTCTGATATTGACCGTCTACAAGGTTCCAGTGGGGCTCTGCAAAAAGG
CGTGGAATAAGAGGGGAAAACGACGTCACATCACGAAGAGAAACAAGGCGGCGGCGGCGGCGGGCGGTGCAACTGTAGGTAAGGAGGGGCCGAAACATGATGGTGAAAAG
GAGGATTGGGGAGAATCGCTTCCGTCGTCGTATTTGTCATCGGAGGATGTGGAATTGGAGAAGGAGATGTGGGACCAATTTTATGGTACTGGCTTCTGGAGGACACCTTC
TCAGAGAGAAACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATCAGAACGTCCTCCTCCGATCCCCGCCAGAGACTCGCCAGCAACCACTACTGACAGACAAGTCGCCCAACAGACTTAAGGAAAAGCCGCGGTTCGCGGAGGTGGC
CGGCGGAACGGCCGCGGAGTGCGCGGCAATATGCTGTTGCTTTCCATGCAGCATGATGAACCTTCTGATATTGACCGTCTACAAGGTTCCAGTGGGGCTCTGCAAAAAGG
CGTGGAATAAGAGGGGAAAACGACGTCACATCACGAAGAGAAACAAGGCGGCGGCGGCGGCGGGCGGTGCAACTGTAGGTAAGGAGGGGCCGAAACATGATGGTGAAAAG
GAGGATTGGGGAGAATCGCTTCCGTCGTCGTATTTGTCATCGGAGGATGTGGAATTGGAGAAGGAGATGTGGGACCAATTTTATGGTACTGGCTTCTGGAGGACACCTTC
TCAGAGAGAAACCTAA
Protein sequenceShow/hide protein sequence
MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAAAGGATVGKEGPKHDGEK
EDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET