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Carg06974 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06974
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr01:4182833..4186042
RNA-Seq ExpressionCarg06974
SyntenyCarg06974
Gene Ontology termsGO:0005730 - nucleolus (cellular component)
InterPro domainsIPR013865 - Protein FAM32A


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037082.1 hypothetical protein SDJN02_00703, partial [Cucurbita argyrosperma subsp. argyrosperma]7.8e-85100Show/hide
Query:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKGKSKGDENPTVEGEILLSADGADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNAKLKSVE
        MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKGKSKGDENPTVEGEILLSADGADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNAKLKSVE
Subjt:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKGKSKGDENPTVEGEILLSADGADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNAKLKSVE

Query:  ESLDDRVKKKADRIGHNGTTFMVWYGMVIYVDSHVPLPLKQFWLKLIVITLLFPFNSFVLSPTV
        ESLDDRVKKKADRIGHNGTTFMVWYGMVIYVDSHVPLPLKQFWLKLIVITLLFPFNSFVLSPTV
Subjt:  ESLDDRVKKKADRIGHNGTTFMVWYGMVIYVDSHVPLPLKQFWLKLIVITLLFPFNSFVLSPTV

XP_008438568.1 PREDICTED: uncharacterized protein LOC103483601 [Cucumis melo]2.8e-4282.61Show/hide
Query:  MSDPFAGAKGGRLTFKGGVLASRSKAID--KKKKKKGKSKGDENPTVEGEILLSADGADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNAKLKS
        MSDP+AGAKGGRLTFKGGVLASRSK ID  KKKKKK K+K DENPT +GEIL SADG +GG G +YTIDAAKRMKYEELFPVET+KFGYDPNNSN K KS
Subjt:  MSDPFAGAKGGRLTFKGGVLASRSKAID--KKKKKKGKSKGDENPTVEGEILLSADGADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNAKLKS

Query:  VEESLDDRVKKKADR
        VE++LDDRVKKKADR
Subjt:  VEESLDDRVKKKADR

XP_022137706.1 uncharacterized protein LOC111009076 [Momordica charantia]5.1e-4485.47Show/hide
Query:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKK----GKSKGDENPTVEGEILLSADGADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNAKL
        MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKK     KS+ D+NPT E EIL SAD  DGG GEVYTIDAAKRMKYEELFPVETKKFGYDPNNSN K 
Subjt:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKK----GKSKGDENPTVEGEILLSADGADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNAKL

Query:  KSVEESLDDRVKKKADR
        KSVEE+LDDRVKKKADR
Subjt:  KSVEESLDDRVKKKADR

XP_023524446.1 uncharacterized protein LOC111788363 [Cucurbita pepo subsp. pepo]2.8e-5096.49Show/hide
Query:  MSDPFAGAKGGRLTFKGGVLASRSKAID-KKKKKKGKSKGDENPTVEGEILLSADGADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNAKLKSV
        MSDPFAGAKGGRLTFKGGVLASRSKAID KKKKKKGKSKGDENPT EGEIL SADGADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSN KLKSV
Subjt:  MSDPFAGAKGGRLTFKGGVLASRSKAID-KKKKKKGKSKGDENPTVEGEILLSADGADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNAKLKSV

Query:  EESLDDRVKKKADR
        EESLDDRVKKKADR
Subjt:  EESLDDRVKKKADR

XP_038893643.1 uncharacterized protein LOC120082512 [Benincasa hispida]8.1e-4282.61Show/hide
Query:  MSDPFAGAKGGRLTFKGGVLASRSKAID--KKKKKKGKSKGDENPTVEGEILLSADGADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNAKLKS
        MSDP+AG KGGRLTFKGGVLASRSK ID  KKKKKK KSK +ENPT E EIL SADG +GG G +YTIDAAKRMKYEELFPVET+KFGYDPNNSN K KS
Subjt:  MSDPFAGAKGGRLTFKGGVLASRSKAID--KKKKKKGKSKGDENPTVEGEILLSADGADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNAKLKS

Query:  VEESLDDRVKKKADR
        VEE+LDDRVKKKADR
Subjt:  VEESLDDRVKKKADR

TrEMBL top hitse value%identityAlignment
A0A0A0LVD6 Uncharacterized protein5.2e-4281.74Show/hide
Query:  MSDPFAGAKGGRLTFKGGVLASRSKAID--KKKKKKGKSKGDENPTVEGEILLSADGADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNAKLKS
        MSDP++GAKGGRLTFKGGVLASRSK ID  KKKKKK KSK DENPT +GEIL SADG + G G +YTIDAAKRMKYEELFPVET+KFGYDPNNSN K KS
Subjt:  MSDPFAGAKGGRLTFKGGVLASRSKAID--KKKKKKGKSKGDENPTVEGEILLSADGADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNAKLKS

Query:  VEESLDDRVKKKADR
        VE++LDDRVKKKADR
Subjt:  VEESLDDRVKKKADR

A0A1S3AWC8 uncharacterized protein LOC1034836011.4e-4282.61Show/hide
Query:  MSDPFAGAKGGRLTFKGGVLASRSKAID--KKKKKKGKSKGDENPTVEGEILLSADGADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNAKLKS
        MSDP+AGAKGGRLTFKGGVLASRSK ID  KKKKKK K+K DENPT +GEIL SADG +GG G +YTIDAAKRMKYEELFPVET+KFGYDPNNSN K KS
Subjt:  MSDPFAGAKGGRLTFKGGVLASRSKAID--KKKKKKGKSKGDENPTVEGEILLSADGADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNAKLKS

Query:  VEESLDDRVKKKADR
        VE++LDDRVKKKADR
Subjt:  VEESLDDRVKKKADR

A0A5A7SXI8 Uncharacterized protein1.4e-4282.61Show/hide
Query:  MSDPFAGAKGGRLTFKGGVLASRSKAID--KKKKKKGKSKGDENPTVEGEILLSADGADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNAKLKS
        MSDP+AGAKGGRLTFKGGVLASRSK ID  KKKKKK K+K DENPT +GEIL SADG +GG G +YTIDAAKRMKYEELFPVET+KFGYDPNNSN K KS
Subjt:  MSDPFAGAKGGRLTFKGGVLASRSKAID--KKKKKKGKSKGDENPTVEGEILLSADGADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNAKLKS

Query:  VEESLDDRVKKKADR
        VE++LDDRVKKKADR
Subjt:  VEESLDDRVKKKADR

A0A6J1C7F9 uncharacterized protein LOC1110090762.5e-4485.47Show/hide
Query:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKK----GKSKGDENPTVEGEILLSADGADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNAKL
        MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKK     KS+ D+NPT E EIL SAD  DGG GEVYTIDAAKRMKYEELFPVETKKFGYDPNNSN K 
Subjt:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKK----GKSKGDENPTVEGEILLSADGADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNAKL

Query:  KSVEESLDDRVKKKADR
        KSVEE+LDDRVKKKADR
Subjt:  KSVEESLDDRVKKKADR

A0A6J1KIE4 uncharacterized protein LOC1114955203.3e-4181.74Show/hide
Query:  MSDPFAGAKGGRLTFKGGVLASRSKAID--KKKKKKGKSKGDENPTVEGEILLSADGADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNAKLKS
        MSDP++GAKGGRLTFKGGVLASRSK ID  KKKKKK KSK DENPT E EIL SADG +G  G VYTIDAAKRMKYEELFPVET+KFGYDPNN++ K KS
Subjt:  MSDPFAGAKGGRLTFKGGVLASRSKAID--KKKKKKGKSKGDENPTVEGEILLSADGADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNAKLKS

Query:  VEESLDDRVKKKADR
        VEE+LDDRVKKKADR
Subjt:  VEESLDDRVKKKADR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G25720.1 unknown protein9.0e-2353.39Show/hide
Query:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKGKSKGDENPTVEGEILLSADG-----ADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNAK
        MSDP+    GGRL FKGG LA+R K+I+KKKKKK K   ++   VE     + DG     A  G  ++Y+IDAAK+ KY++LFPVE KKFGY P    A 
Subjt:  MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKGKSKGDENPTVEGEILLSADG-----ADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNAK

Query:  LKSVEESLDDRVKKKADR
         +S E++LDDRVKKKADR
Subjt:  LKSVEESLDDRVKKKADR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGATCCATTTGCAGGGGCGAAAGGAGGTAGGCTCACCTTCAAGGGAGGAGTCCTAGCCTCCCGCAGTAAGGCTATTGACAAGAAGAAGAAGAAGAAAGGTAAAAG
TAAAGGCGACGAGAACCCTACGGTCGAGGGAGAGATTTTGTTGTCAGCGGATGGTGCAGATGGCGGTGTCGGAGAAGTGTATACTATTGACGCGGCCAAGCGTATGAAGT
ACGAGGAGCTCTTCCCGGTGGAGACAAAGAAGTTCGGTTACGACCCTAACAACTCCAATGCCAAGTTGAAGTCTGTGGAGGAATCTCTCGATGACCGTGTCAAAAAGAAA
GCGGATCGCATTGGTCATAATGGAACTACTTTTATGGTATGGTATGGTATGGTAATCTATGTAGACTCTCATGTGCCATTACCATTGAAGCAATTTTGGTTGAAGCTGAT
TGTAATTACACTGCTTTTTCCCTTTAATAGTTTTGTTCTCTCCCCCACTGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGATCCATTTGCAGGGGCGAAAGGAGGTAGGCTCACCTTCAAGGGAGGAGTCCTAGCCTCCCGCAGTAAGGCTATTGACAAGAAGAAGAAGAAGAAAGGTAAAAG
TAAAGGCGACGAGAACCCTACGGTCGAGGGAGAGATTTTGTTGTCAGCGGATGGTGCAGATGGCGGTGTCGGAGAAGTGTATACTATTGACGCGGCCAAGCGTATGAAGT
ACGAGGAGCTCTTCCCGGTGGAGACAAAGAAGTTCGGTTACGACCCTAACAACTCCAATGCCAAGTTGAAGTCTGTGGAGGAATCTCTCGATGACCGTGTCAAAAAGAAA
GCGGATCGCATTGGTCATAATGGAACTACTTTTATGGTATGGTATGGTATGGTAATCTATGTAGACTCTCATGTGCCATTACCATTGAAGCAATTTTGGTTGAAGCTGAT
TGTAATTACACTGCTTTTTCCCTTTAATAGTTTTGTTCTCTCCCCCACTGTCTAATAGGAGGCCAAATTTGTACCAGCTAACATGAGAACATGACTGTATCTTTAGTTAT
ATATGGACACTTTGTAGAAAGATGGCCTTGTGGGTTATTCCAACAATTCACTTACCAAAATAATTTAACCCCAAAATATTTGGAACATATACCTGGTTTAGGTTTTTTTA
GTGTAATTGGCAC
Protein sequenceShow/hide protein sequence
MSDPFAGAKGGRLTFKGGVLASRSKAIDKKKKKKGKSKGDENPTVEGEILLSADGADGGVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNAKLKSVEESLDDRVKKK
ADRIGHNGTTFMVWYGMVIYVDSHVPLPLKQFWLKLIVITLLFPFNSFVLSPTV