; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg06978 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06978
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTPR_REGION domain-containing protein
Genome locationCarg_Chr01:4174671..4177097
RNA-Seq ExpressionCarg06978
SyntenyCarg06978
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037078.1 hypothetical protein SDJN02_00699, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-131100Show/hide
Query:  MKATILCFPCAPLPFLPKSDSSNSFSEPGDSSLHQSHLLPSRHSELSAASHLPPLVVYETAALALTLAIKQLSGGGCDSIGVCKSLKALSLWTRDESELE
        MKATILCFPCAPLPFLPKSDSSNSFSEPGDSSLHQSHLLPSRHSELSAASHLPPLVVYETAALALTLAIKQLSGGGCDSIGVCKSLKALSLWTRDESELE
Subjt:  MKATILCFPCAPLPFLPKSDSSNSFSEPGDSSLHQSHLLPSRHSELSAASHLPPLVVYETAALALTLAIKQLSGGGCDSIGVCKSLKALSLWTRDESELE

Query:  VGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIRYENFVHNDALYMMPCFNLYAPSIMKLAQRNHSGDLEDANEALGLHLQRYAFLTKDHFDSAAT
        VGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIRYENFVHNDALYMMPCFNLYAPSIMKLAQRNHSGDLEDANEALGLHLQRYAFLTKDHFDSAAT
Subjt:  VGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIRYENFVHNDALYMMPCFNLYAPSIMKLAQRNHSGDLEDANEALGLHLQRYAFLTKDHFDSAAT

Query:  LYSTALKFDPSIRLQNHSRCELLNFRRDSVPCIHNKF
        LYSTALKFDPSIRLQNHSRCELLNFRRDSVPCIHNKF
Subjt:  LYSTALKFDPSIRLQNHSRCELLNFRRDSVPCIHNKF

XP_022948525.1 uncharacterized protein LOC111452178 isoform X1 [Cucurbita moschata]2.5e-6067.34Show/hide
Query:  LPSRHSELSAASHLPPLVVYETAALALTLAIKQLSGGGCDSIGVCKSLKALSLWTRDESELEVGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIR
        +P RHSELSAASHLPPLVVYETAALALTLAIKQLSGGGCDSIGVCKSLKALSLWTRDE     G                                    
Subjt:  LPSRHSELSAASHLPPLVVYETAALALTLAIKQLSGGGCDSIGVCKSLKALSLWTRDESELEVGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIR

Query:  YENFVHNDALYMMPCFNLYAPSIMKLAQRNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHSRCELLNFRRDSVPCIHNKF
                         +   SIM LAQRNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHSRCELLNFRRDSVPCIHNKF
Subjt:  YENFVHNDALYMMPCFNLYAPSIMKLAQRNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHSRCELLNFRRDSVPCIHNKF

XP_022948526.1 uncharacterized protein LOC111452178 isoform X2 [Cucurbita moschata]1.0e-5363.82Show/hide
Query:  LPSRHSELSAASHLPPLVVYETAALALTLAIKQLSGGGCDSIGVCKSLKALSLWTRDESELEVGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIR
        +P RHSELSAASHLPPLVVYETAALALTLAIKQLSGGGCDSIGVCKSLKALSLWTRDE     G                                    
Subjt:  LPSRHSELSAASHLPPLVVYETAALALTLAIKQLSGGGCDSIGVCKSLKALSLWTRDESELEVGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIR

Query:  YENFVHNDALYMMPCFNLYAPSIMKLAQRNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHSRCELLNFRRDSVPCIHNKF
                         +   SIM LAQRNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHS       RRDSVPCIHNKF
Subjt:  YENFVHNDALYMMPCFNLYAPSIMKLAQRNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHSRCELLNFRRDSVPCIHNKF

XP_023519354.1 small glutamine-rich tetratricopeptide repeat-containing protein beta [Cucurbita pepo subsp. pepo]3.8e-1643.31Show/hide
Query:  IKQLSGGGCDSIGVCKSLKALSLWTRDESELEVGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIRYENFVHNDALYMMPCFNLYA----PSIMKL
        I QLSGG  DS+GV KSL+AL+LW R E E+E GNFSQA+          LLLS                        A+ + PC  ++      SI++L
Subjt:  IKQLSGGGCDSIGVCKSLKALSLWTRDESELEVGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIRYENFVHNDALYMMPCFNLYA----PSIMKL

Query:  AQRNHSGDLEDANEALGLH--------LQRYAFLTKDHFDSAATLYSTALKFDPSIR
        A  NH+G LEDANEAL +          Q   FL+ DHFDSA   YSTAL+ DPSIR
Subjt:  AQRNHSGDLEDANEALGLH--------LQRYAFLTKDHFDSAATLYSTALKFDPSIR

XP_038894326.1 uncharacterized protein LOC120082956 [Benincasa hispida]5.0e-1633.57Show/hide
Query:  MKATILCFPCAPLPFLPKSDSSNSFSEPGDSSLHQSHLLPSR----------HSELSAASH------------------LPPLVVYE-------------
        MK ++ CF CAPLPFLP   S +S S    SS   S+ +  R          H E+   ++                   PP +                
Subjt:  MKATILCFPCAPLPFLPKSDSSNSFSEPGDSSLHQSHLLPSR----------HSELSAASH------------------LPPLVVYE-------------

Query:  --------------TAALALTLAIKQLSGGGCDSIGVCKSLKALSLWTRDESELEVGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIRYENFVHN
                      T A A  + I QLSGG  DS+GV KSL+AL+L  R + ELE  NFSQA+          LLLS                       
Subjt:  --------------TAALALTLAIKQLSGGGCDSIGVCKSLKALSLWTRDESELEVGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIRYENFVHN

Query:  DALYMMPCFNLYA----PSIMKLAQRNHSGDLEDANEALGL---HLQRY-----AFLTKDHFDSAATLYSTALKFDPSIR
         A+ + PC  ++      SI++LA  NHSG LEDANEAL +   +L+ Y     A L  +HFDSA T YSTAL+ DPSIR
Subjt:  DALYMMPCFNLYA----PSIMKLAQRNHSGDLEDANEALGL---HLQRY-----AFLTKDHFDSAATLYSTALKFDPSIR

TrEMBL top hitse value%identityAlignment
A0A0A0LQA2 TPR_REGION domain-containing protein2.4e-1635.06Show/hide
Query:  MKATILCFPCAPLPFLPKSDSSNSFSEPGDSSLHQSHL-LPSRHSELSAASH------------------LPPLVVYE----------------------
        MK ++ CF C  LPFLP + + NSFS   DS   +S +   + H E+   ++                   PP +V                        
Subjt:  MKATILCFPCAPLPFLPKSDSSNSFSEPGDSSLHQSHL-LPSRHSELSAASH------------------LPPLVVYE----------------------

Query:  -----TAALALTLAIKQLSGGGCDSIGVCKSLKALSLWTRDESELEVGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIRYENFVHNDALYMMPCF
             T A A  L I QLSG   DS+G+ KSL+AL+L  R + ELE GNFSQAE          LLLS                        A+ + PC 
Subjt:  -----TAALALTLAIKQLSGGGCDSIGVCKSLKALSLWTRDESELEVGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIRYENFVHNDALYMMPCF

Query:  NLYA----PSIMKLAQRNHSGDLEDANEALGL---HLQRY-----AFLTKDHFDSAATLYSTALKFDPSIR
         ++      SI++LA  NHSG LEDANEAL +   +L+ Y     AFL  DHFDSA   YSTAL+ DPSIR
Subjt:  NLYA----PSIMKLAQRNHSGDLEDANEALGL---HLQRY-----AFLTKDHFDSAATLYSTALKFDPSIR

A0A1S3AUF9 tetratricopeptide repeat protein 12.0e-1534.32Show/hide
Query:  MKATILCFPCAPLPFLPKSDSSNSFSEPGDSSLHQSHL-LPSRHSELSAASH------------------LPPLVVYE----------------------
        MK ++ CF CA LPFLP + +  SFS   DS   +S +   + H E+   ++                   PP +V                        
Subjt:  MKATILCFPCAPLPFLPKSDSSNSFSEPGDSSLHQSHL-LPSRHSELSAASH------------------LPPLVVYE----------------------

Query:  -----TAALALTLAIKQLSGGGCDSIGVCKSLKALSLWTRDESELEVGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIRYENFVHNDALYMMPCF
             T A A  L I QLSG   DS+GV KSL+AL+L  R + ELE GNFSQAE          LLLS                        A+ ++PC 
Subjt:  -----TAALALTLAIKQLSGGGCDSIGVCKSLKALSLWTRDESELEVGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIRYENFVHNDALYMMPCF

Query:  NLYA----PSIMKLAQRNHSGDLEDANEALGL---HLQRY-----AFLTKDHFDSAATLYSTALKFDPSIR
         ++      S+++LA  NHSG LEDANEAL +   +L+ Y      FL  D FDSA   YSTAL+ DPSIR
Subjt:  NLYA----PSIMKLAQRNHSGDLEDANEALGL---HLQRY-----AFLTKDHFDSAATLYSTALKFDPSIR

A0A6J1EAV3 small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X12.3e-1442.04Show/hide
Query:  IKQLSGGGCDSIGVCKSLKALSLWTRDESELEVGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIRYENFVHNDALYMMPCFNLYA----PSIMKL
        I QLSGG  DS+GV KSL+AL+L  R E E+E GNFSQA+          LLLS                        A+ + PC  ++      SI++L
Subjt:  IKQLSGGGCDSIGVCKSLKALSLWTRDESELEVGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIRYENFVHNDALYMMPCFNLYA----PSIMKL

Query:  AQRNHSGDLEDANEALGLH--------LQRYAFLTKDHFDSAATLYSTALKFDPSIR
        A  NH+G LEDANEAL +          Q   FL+ DHFDSA   YSTAL+ +PSIR
Subjt:  AQRNHSGDLEDANEALGLH--------LQRYAFLTKDHFDSAATLYSTALKFDPSIR

A0A6J1G9F6 uncharacterized protein LOC111452178 isoform X25.0e-5463.82Show/hide
Query:  LPSRHSELSAASHLPPLVVYETAALALTLAIKQLSGGGCDSIGVCKSLKALSLWTRDESELEVGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIR
        +P RHSELSAASHLPPLVVYETAALALTLAIKQLSGGGCDSIGVCKSLKALSLWTRDE     G                                    
Subjt:  LPSRHSELSAASHLPPLVVYETAALALTLAIKQLSGGGCDSIGVCKSLKALSLWTRDESELEVGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIR

Query:  YENFVHNDALYMMPCFNLYAPSIMKLAQRNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHSRCELLNFRRDSVPCIHNKF
                         +   SIM LAQRNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHS       RRDSVPCIHNKF
Subjt:  YENFVHNDALYMMPCFNLYAPSIMKLAQRNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHSRCELLNFRRDSVPCIHNKF

A0A6J1GA38 uncharacterized protein LOC111452178 isoform X11.2e-6067.34Show/hide
Query:  LPSRHSELSAASHLPPLVVYETAALALTLAIKQLSGGGCDSIGVCKSLKALSLWTRDESELEVGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIR
        +P RHSELSAASHLPPLVVYETAALALTLAIKQLSGGGCDSIGVCKSLKALSLWTRDE     G                                    
Subjt:  LPSRHSELSAASHLPPLVVYETAALALTLAIKQLSGGGCDSIGVCKSLKALSLWTRDESELEVGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIR

Query:  YENFVHNDALYMMPCFNLYAPSIMKLAQRNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHSRCELLNFRRDSVPCIHNKF
                         +   SIM LAQRNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHSRCELLNFRRDSVPCIHNKF
Subjt:  YENFVHNDALYMMPCFNLYAPSIMKLAQRNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHSRCELLNFRRDSVPCIHNKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G17670.1 tetratricopeptide repeat (TPR)-containing protein2.5e-0530.07Show/hide
Query:  SIGVCKSLKALSLWTRDESELEVGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIRYENFVHNDALYMMPCFNLYAPSIMKLAQRNHSGDLEDANE
        S  V  +L AL+L     S+++ GNFS+AE L  Q     L L    G H             F H               S+ KL   ++SG LED ++
Subjt:  SIGVCKSLKALSLWTRDESELEVGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIRYENFVHNDALYMMPCFNLYAPSIMKLAQRNHSGDLEDANE

Query:  ALGLH--------LQRYAFLTKDHFDSAATLYSTALKFDPSIR
        AL L          Q   ++ K  +D A   Y T L+ DPS+R
Subjt:  ALGLH--------LQRYAFLTKDHFDSAATLYSTALKFDPSIR

AT3G17670.2 tetratricopeptide repeat (TPR)-containing protein2.5e-0530.07Show/hide
Query:  SIGVCKSLKALSLWTRDESELEVGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIRYENFVHNDALYMMPCFNLYAPSIMKLAQRNHSGDLEDANE
        S  V  +L AL+L     S+++ GNFS+AE L  Q     L L    G H             F H               S+ KL   ++SG LED ++
Subjt:  SIGVCKSLKALSLWTRDESELEVGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIRYENFVHNDALYMMPCFNLYAPSIMKLAQRNHSGDLEDANE

Query:  ALGLH--------LQRYAFLTKDHFDSAATLYSTALKFDPSIR
        AL L          Q   ++ K  +D A   Y T L+ DPS+R
Subjt:  ALGLH--------LQRYAFLTKDHFDSAATLYSTALKFDPSIR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCGACTATCCTCTGCTTTCCTTGCGCTCCTCTACCATTTCTTCCCAAATCAGACTCTTCCAATTCGTTCTCAGAACCAGGAGATTCGAGTCTGCACCAATCGCA
TTTGCTGCCGTCAAGACACTCCGAACTCTCAGCGGCGTCGCACCTTCCTCCATTGGTTGTTTACGAAACTGCGGCGCTGGCCCTAACGTTGGCCATAAAGCAGTTGTCTG
GTGGAGGCTGTGATTCTATCGGTGTGTGTAAGAGTTTGAAGGCTCTTTCTCTGTGGACGAGAGATGAAAGTGAATTGGAGGTCGGGAATTTCTCTCAGGCCGAGCCACTT
TTCCTGCAGTTAAAATTGTTCCGCCTTTTACTGAGTGGCAATGTTGGTAACCACTTCTCCATTCTGCTTTTTTCTCCGATTCGGTATGAAAATTTTGTTCACAATGATGC
ATTATATATGATGCCATGTTTCAATTTATATGCCCCGTCTATCATGAAATTAGCACAGCGGAACCATTCTGGTGACCTTGAAGATGCAAATGAAGCTCTAGGCTTACATT
TGCAAAGGTATGCATTCTTAACTAAGGACCATTTTGATTCAGCTGCGACGCTATATTCAACAGCTTTAAAATTTGATCCTTCAATTCGCCTTCAGAACCATTCAAGGTGT
GAGTTGCTAAATTTCAGGAGAGACTCGGTGCCGTGCATACACAACAAATTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCGACTATCCTCTGCTTTCCTTGCGCTCCTCTACCATTTCTTCCCAAATCAGACTCTTCCAATTCGTTCTCAGAACCAGGAGATTCGAGTCTGCACCAATCGCA
TTTGCTGCCGTCAAGACACTCCGAACTCTCAGCGGCGTCGCACCTTCCTCCATTGGTTGTTTACGAAACTGCGGCGCTGGCCCTAACGTTGGCCATAAAGCAGTTGTCTG
GTGGAGGCTGTGATTCTATCGGTGTGTGTAAGAGTTTGAAGGCTCTTTCTCTGTGGACGAGAGATGAAAGTGAATTGGAGGTCGGGAATTTCTCTCAGGCCGAGCCACTT
TTCCTGCAGTTAAAATTGTTCCGCCTTTTACTGAGTGGCAATGTTGGTAACCACTTCTCCATTCTGCTTTTTTCTCCGATTCGGTATGAAAATTTTGTTCACAATGATGC
ATTATATATGATGCCATGTTTCAATTTATATGCCCCGTCTATCATGAAATTAGCACAGCGGAACCATTCTGGTGACCTTGAAGATGCAAATGAAGCTCTAGGCTTACATT
TGCAAAGGTATGCATTCTTAACTAAGGACCATTTTGATTCAGCTGCGACGCTATATTCAACAGCTTTAAAATTTGATCCTTCAATTCGCCTTCAGAACCATTCAAGGTGT
GAGTTGCTAAATTTCAGGAGAGACTCGGTGCCGTGCATACACAACAAATTCTGAGAACAAAAATAATGATGACACAGTTCGAGATTCAGTCGTGCATTCAGGTTGCTTCC
AGGTTTCAAATTCCTGACTCATATTGTCTTTCAAACCTTACTTTGGTTAAATGCCTAGAAATTTAATTCAATTTTGAAGTTCCATTGAAATCTGAATGGGAATTCGTATA
ACTCTACATGGGAATGATTTTGATCCCAAGAAAAATAAGCAGTTAAATACATAAAATTGTAAACGTCTAAAAGAAATCGGAACTTCGTGAAGAAAAAGAACAACTAAACA
TAATTCAGTAATTTTTTCCCAACGGATAATGCAGTGTTCTCGTCCCTAACTTCCTACCCATGACCCTGCCACGACGATATTCGTGCTTCAAAAAGTTAAATTAGAAGTAT
GATAGTGACAAGAATAAGTTCGAGAATAATAATTGATAGTCTCTGAACTTCAAACTTAAGTTTCTAAATTTCAAATCTCTCTCTGATTGATATTCGACAAATTCGACAAA
TTCGACAAATTCAACCATTCTTTAGATTATCAGATCTGTGCCTAATAAAACCTTTTTTTTTTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MKATILCFPCAPLPFLPKSDSSNSFSEPGDSSLHQSHLLPSRHSELSAASHLPPLVVYETAALALTLAIKQLSGGGCDSIGVCKSLKALSLWTRDESELEVGNFSQAEPL
FLQLKLFRLLLSGNVGNHFSILLFSPIRYENFVHNDALYMMPCFNLYAPSIMKLAQRNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHSRC
ELLNFRRDSVPCIHNKF