; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg06993 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg06993
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein SHOOT GRAVITROPISM 5-like
Genome locationCarg_Chr01:4087910..4088566
RNA-Seq ExpressionCarg06993
SyntenyCarg06993
Gene Ontology termsGO:0009630 - gravitropism (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR039288 - Zinc finger protein SHOOT GRAVITROPISM 5-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037063.1 Protein SHOOT GRAVITROPISM 5, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-104100Show/hide
Query:  MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAPNWAALIAPPISKPPDANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVEGNKGCSSIKLQLS
        MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAPNWAALIAPPISKPPDANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVEGNKGCSSIKLQLS
Subjt:  MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAPNWAALIAPPISKPPDANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVEGNKGCSSIKLQLS

Query:  IGSCEFVDGARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTTTT
        IGSCEFVDGARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTTTT
Subjt:  IGSCEFVDGARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTTTT

Query:  TTTTAASTTTTTTASCRS
        TTTTAASTTTTTTASCRS
Subjt:  TTTTAASTTTTTTASCRS

XP_022948962.1 protein SHOOT GRAVITROPISM 5-like [Cucurbita moschata]5.8e-10499.54Show/hide
Query:  MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAPNWAALIAPPISKPPDANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVEGNKGCSSIKLQLS
        MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAPNWAALIAPPISKPPDANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVEGNKGCSSIKLQLS
Subjt:  MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAPNWAALIAPPISKPPDANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVEGNKGCSSIKLQLS

Query:  IGSCEFVDGARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTTTT
        IGSCEFVDGARDVRDE GQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTTTT
Subjt:  IGSCEFVDGARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTTTT

Query:  TTTTAASTTTTTTASCRS
        TTTTAASTTTTTTASCRS
Subjt:  TTTTAASTTTTTTASCRS

XP_022998680.1 protein SHOOT GRAVITROPISM 5-like [Cucurbita maxima]3.8e-9594.5Show/hide
Query:  MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAPNWAALIAPPISKPPDANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVEGNKGCSSIKLQLS
        MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAP WAALIAPPISKPPDANNNGSPHDHNLDLKLSTGSNS      NP+PNLVEGNKGCSSIKLQLS
Subjt:  MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAPNWAALIAPPISKPPDANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVEGNKGCSSIKLQLS

Query:  IGSCEFVDGARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTTTT
        IGSCEFVDGARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVE+AEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTTTT
Subjt:  IGSCEFVDGARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTTTT

Query:  TTTTAASTTTTTTASCRS
        TT   ASTTTTTTASCRS
Subjt:  TTTTAASTTTTTTASCRS

XP_023523444.1 protein SHOOT GRAVITROPISM 5-like [Cucurbita pepo subsp. pepo]9.6e-9996.33Show/hide
Query:  MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAPNWAALIAPPISKPPDANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVEGNKGCSSIKLQLS
        MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAPNWAALIAPPISKPPDANNNGSPHDHNLDLKLSTG  SNSN NPN NPNLVEGNKGCSSIKLQLS
Subjt:  MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAPNWAALIAPPISKPPDANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVEGNKGCSSIKLQLS

Query:  IGSCEFVDGARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTTTT
        IGSCEF+DGARDVRDEAGQTLRVA+AEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAI LKQT IKRVNSTILEITCQACQKQFQAKTTTT
Subjt:  IGSCEFVDGARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTTTT

Query:  TTTTAASTTTTTTASCRS
        TTTTAASTTTTTTASCRS
Subjt:  TTTTAASTTTTTTASCRS

XP_038893517.1 zinc finger protein SHOOT GRAVITROPISM 5-like [Benincasa hispida]2.5e-5464.32Show/hide
Query:  MGHL-QQQSQTLQPAACLSQTASSPSPSSDTNISSAP--NWAALIAPPISKPPDA----------NNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVE
        MGHL +Q+SQT+QP ACLS+TASSPSPSSDTN SSA   NW AL+APP  KP DA          NN  S +DHNLDLKLST SN               
Subjt:  MGHL-QQQSQTLQPAACLSQTASSPSPSSDTNISSAP--NWAALIAPPISKPPDA----------NNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVE

Query:  GNKGCSSIKLQLSIGSCEFVD-------------GARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAI
        GN   SS KLQLSIGS +F D             GA DVR+EA + LRVAM EKAYAEEARQQAKRQ+EIAE+EF NAKRMRQQAQAELDKA ALKQ AI
Subjt:  GNKGCSSIKLQLSIGSCEFVD-------------GARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAI

Query:  KRVNSTILEITCQACQKQFQAKTTTTTTTTAASTTTTTTAS
        K++NSTILEITCQACQKQFQAKT  TTTTT  +TTTT+ A+
Subjt:  KRVNSTILEITCQACQKQFQAKTTTTTTTTAASTTTTTTAS

TrEMBL top hitse value%identityAlignment
A0A0A0LPV5 C2H2-type domain-containing protein8.1e-5162.76Show/hide
Query:  MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAP----NWAALIAPPIS-KPPDA--------NNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVE
        MGHL+Q+SQ +QP ACLS+TASSPSPSSDTN SS P    NW AL+ PP++ KP DA        +NN +  DHNLDLKLST SN     N   N     
Subjt:  MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAP----NWAALIAPPIS-KPPDA--------NNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVE

Query:  GNKGCSSIKLQLSIGSCEFVD-----------GARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKR
         NK  SS KL+LS+GS +F D           GA DVR+EA + LRVAMAEKAYAEEAR+QAKRQ+E+AE+EF NAKRMRQQAQAELDKA ALKQ AIK+
Subjt:  GNKGCSSIKLQLSIGSCEFVD-----------GARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKR

Query:  VNSTILEITCQACQKQFQAKTTTTTTTTAASTTTTTTAS
        +NSTILEITCQACQKQFQAKT T T TT  +TTT+T+A+
Subjt:  VNSTILEITCQACQKQFQAKTTTTTTTTAASTTTTTTAS

A0A1S3BW52 protein SHOOT GRAVITROPISM 5-like4.3e-5263.18Show/hide
Query:  MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAP----NWAALI-APPISKPPDA--------NNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVE
        MGHL+Q+ Q +QP ACLS+TASSPSPSSDTN SS P    NW AL+ APP  KP DA        +NN + +DHNLDLKLST SN     N N       
Subjt:  MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAP----NWAALI-APPISKPPDA--------NNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVE

Query:  GNKGCSSIKLQLSIGSCEFVD-----------GARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKR
         NKG SS KL+LS+GS +F D           GA DVR+EA + LRVAMAEKAYAEEAR+QAKRQ+E+AE+EF NAKRMRQQAQAELDKA ALKQ AIK+
Subjt:  GNKGCSSIKLQLSIGSCEFVD-----------GARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKR

Query:  VNSTILEITCQACQKQFQAKTTTTTTTTAASTTTTTTAS
        +NSTILEITCQACQKQFQAK  T T TT  +TTTTT+A+
Subjt:  VNSTILEITCQACQKQFQAKTTTTTTTTAASTTTTTTAS

A0A5D3BIM7 Protein SHOOT GRAVITROPISM 5-like4.3e-5263.18Show/hide
Query:  MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAP----NWAALI-APPISKPPDA--------NNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVE
        MGHL+Q+ Q +QP ACLS+TASSPSPSSDTN SS P    NW AL+ APP  KP DA        +NN + +DHNLDLKLST SN     N N       
Subjt:  MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAP----NWAALI-APPISKPPDA--------NNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVE

Query:  GNKGCSSIKLQLSIGSCEFVD-----------GARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKR
         NKG SS KL+LS+GS +F D           GA DVR+EA + LRVAMAEKAYAEEAR+QAKRQ+E+AE+EF NAKRMRQQAQAELDKA ALKQ AIK+
Subjt:  GNKGCSSIKLQLSIGSCEFVD-----------GARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKR

Query:  VNSTILEITCQACQKQFQAKTTTTTTTTAASTTTTTTAS
        +NSTILEITCQACQKQFQAK  T T TT  +TTTTT+A+
Subjt:  VNSTILEITCQACQKQFQAKTTTTTTTTAASTTTTTTAS

A0A6J1GAP5 protein SHOOT GRAVITROPISM 5-like2.8e-10499.54Show/hide
Query:  MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAPNWAALIAPPISKPPDANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVEGNKGCSSIKLQLS
        MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAPNWAALIAPPISKPPDANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVEGNKGCSSIKLQLS
Subjt:  MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAPNWAALIAPPISKPPDANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVEGNKGCSSIKLQLS

Query:  IGSCEFVDGARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTTTT
        IGSCEFVDGARDVRDE GQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTTTT
Subjt:  IGSCEFVDGARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTTTT

Query:  TTTTAASTTTTTTASCRS
        TTTTAASTTTTTTASCRS
Subjt:  TTTTAASTTTTTTASCRS

A0A6J1KD59 protein SHOOT GRAVITROPISM 5-like1.8e-9594.5Show/hide
Query:  MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAPNWAALIAPPISKPPDANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVEGNKGCSSIKLQLS
        MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAP WAALIAPPISKPPDANNNGSPHDHNLDLKLSTGSNS      NP+PNLVEGNKGCSSIKLQLS
Subjt:  MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAPNWAALIAPPISKPPDANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVEGNKGCSSIKLQLS

Query:  IGSCEFVDGARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTTTT
        IGSCEFVDGARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVE+AEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTTTT
Subjt:  IGSCEFVDGARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTTTT

Query:  TTTTAASTTTTTTASCRS
        TT   ASTTTTTTASCRS
Subjt:  TTTTAASTTTTTTASCRS

SwissProt top hitse value%identityAlignment
F4IPE3 Zinc finger protein SHOOT GRAVITROPISM 53.8e-1335.91Show/hide
Query:  ACLSQTASSPS-PSSDTNISSAPNWAALIAPPISKPP------DANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVE----GNKGCSSIKLQLSI--
        AC S+TAS+ S PSS+TN       A     P+   P       +    S ++ NL+L+L   S++ + +  N    + E     N    +  L LSI  
Subjt:  ACLSQTASSPS-PSSDTNISSAPNWAALIAPPISKPP------DANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVE----GNKGCSSIKLQLSI--

Query:  -GSCEFVDGARDVRD--EAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTT
          S +  +    +++   + Q +++AM EKAYAEEA+++AKRQ EIAE EFANAK++RQ+AQAEL++A  LK+ ++K+++STI+++TCQ C+ QFQA   
Subjt:  -GSCEFVDGARDVRD--EAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTT

Query:  TTTTTTAASTTTTTTASCRS
           T    S   +  +S  +
Subjt:  TTTTTTAASTTTTTTASCRS

Q9C9X7 Protein indeterminate-domain 145.8e-0644.58Show/hide
Query:  EEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTTTTTTTTAASTTTTTTA
        EEAR++ KRQ+EIAE EFA AKR+RQ A+AEL KA   ++ A +R+++T+++ITC  C++ FQA             T  +T+
Subjt:  EEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTTTTTTTTAASTTTTTTA

Q9FRH4 Protein indeterminate-domain 162.1e-0833.18Show/hide
Query:  HLQQQSQTLQPAACLSQTASSPSPSSDTNISSAPNWAALIAPPISKPPDANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVEGNKGCSSIKLQLSIG
        HLQQ +  L             +PS  T  S+A     L   P+ +PP  +N  SP         +     N++S P              S++LQLSIG
Subjt:  HLQQQSQTLQPAACLSQTASSPSPSSDTNISSAPNWAALIAPPISKPPDANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVEGNKGCSSIKLQLSIG

Query:  SCEFVDGAR-DVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTTTTT
               AR + + E   T   A  E   AEE RQ+AKRQ+E+AE++F  AKR+R++A+ EL+KA  +++ AIKR+N+T++EITC +C++ FQ   T   
Subjt:  SCEFVDGAR-DVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTTTTT

Query:  TTTAASTTTTTTAS
        +T++   +  ++A+
Subjt:  TTTAASTTTTTTAS

Arabidopsis top hitse value%identityAlignment
AT1G25250.1 indeterminate(ID)-domain 161.5e-0933.18Show/hide
Query:  HLQQQSQTLQPAACLSQTASSPSPSSDTNISSAPNWAALIAPPISKPPDANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVEGNKGCSSIKLQLSIG
        HLQQ +  L             +PS  T  S+A     L   P+ +PP  +N  SP         +     N++S P              S++LQLSIG
Subjt:  HLQQQSQTLQPAACLSQTASSPSPSSDTNISSAPNWAALIAPPISKPPDANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVEGNKGCSSIKLQLSIG

Query:  SCEFVDGAR-DVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTTTTT
               AR + + E   T   A  E   AEE RQ+AKRQ+E+AE++F  AKR+R++A+ EL+KA  +++ AIKR+N+T++EITC +C++ FQ   T   
Subjt:  SCEFVDGAR-DVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTTTTT

Query:  TTTAASTTTTTTAS
        +T++   +  ++A+
Subjt:  TTTAASTTTTTTAS

AT2G01940.1 C2H2-like zinc finger protein2.7e-1435.91Show/hide
Query:  ACLSQTASSPS-PSSDTNISSAPNWAALIAPPISKPP------DANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVE----GNKGCSSIKLQLSI--
        AC S+TAS+ S PSS+TN       A     P+   P       +    S ++ NL+L+L   S++ + +  N    + E     N    +  L LSI  
Subjt:  ACLSQTASSPS-PSSDTNISSAPNWAALIAPPISKPP------DANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVE----GNKGCSSIKLQLSI--

Query:  -GSCEFVDGARDVRD--EAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTT
          S +  +    +++   + Q +++AM EKAYAEEA+++AKRQ EIAE EFANAK++RQ+AQAEL++A  LK+ ++K+++STI+++TCQ C+ QFQA   
Subjt:  -GSCEFVDGARDVRD--EAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTT

Query:  TTTTTTAASTTTTTTASCRS
           T    S   +  +S  +
Subjt:  TTTTTTAASTTTTTTASCRS

AT2G01940.2 C2H2-like zinc finger protein2.7e-1435.91Show/hide
Query:  ACLSQTASSPS-PSSDTNISSAPNWAALIAPPISKPP------DANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVE----GNKGCSSIKLQLSI--
        AC S+TAS+ S PSS+TN       A     P+   P       +    S ++ NL+L+L   S++ + +  N    + E     N    +  L LSI  
Subjt:  ACLSQTASSPS-PSSDTNISSAPNWAALIAPPISKPP------DANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVE----GNKGCSSIKLQLSI--

Query:  -GSCEFVDGARDVRD--EAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTT
          S +  +    +++   + Q +++AM EKAYAEEA+++AKRQ EIAE EFANAK++RQ+AQAEL++A  LK+ ++K+++STI+++TCQ C+ QFQA   
Subjt:  -GSCEFVDGARDVRD--EAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTT

Query:  TTTTTTAASTTTTTTASCRS
           T    S   +  +S  +
Subjt:  TTTTTTAASTTTTTTASCRS

AT2G01940.3 C2H2-like zinc finger protein2.7e-1435.91Show/hide
Query:  ACLSQTASSPS-PSSDTNISSAPNWAALIAPPISKPP------DANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVE----GNKGCSSIKLQLSI--
        AC S+TAS+ S PSS+TN       A     P+   P       +    S ++ NL+L+L   S++ + +  N    + E     N    +  L LSI  
Subjt:  ACLSQTASSPS-PSSDTNISSAPNWAALIAPPISKPP------DANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVE----GNKGCSSIKLQLSI--

Query:  -GSCEFVDGARDVRD--EAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTT
          S +  +    +++   + Q +++AM EKAYAEEA+++AKRQ EIAE EFANAK++RQ+AQAEL++A  LK+ ++K+++STI+++TCQ C+ QFQA   
Subjt:  -GSCEFVDGARDVRD--EAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTT

Query:  TTTTTTAASTTTTTTASCRS
           T    S   +  +S  +
Subjt:  TTTTTTAASTTTTTTASCRS

AT3G48550.1 BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G01940.3)6.8e-1032.09Show/hide
Query:  HNLDLKLSTGSNSNSNSNPNPNPNLVEGNKGCSSIKLQLSIGSCEFVDGARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQ
        H+LDLKLS   +S S +   PN                          G   ++ +A + +R+A  EKAYAE  R+  +R++E+A+ EFA A+ M Q+A+
Subjt:  HNLDLKLSTGSNSNSNSNPNPNPNLVEGNKGCSSIKLQLSIGSCEFVDGARDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQ

Query:  AELDKAIALKQTAIKRVNSTILEITCQACQKQFQ
         E+++A  LK+ ++ ++++  LEITC +C+++F+
Subjt:  AELDKAIALKQTAIKRVNSTILEITCQACQKQFQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACATCTCCAGCAGCAATCCCAAACCCTCCAGCCGGCCGCATGTTTGTCCCAAACGGCATCGAGTCCAAGCCCATCCAGCGACACCAACATCAGCAGCGCACCCAA
TTGGGCAGCTCTCATAGCGCCACCCATTTCAAAGCCTCCGGACGCCAACAATAATGGCTCACCACACGATCACAATCTAGACCTCAAACTCTCAACTGGGTCGAATTCGA
ATTCGAATTCGAATCCGAATCCGAATCCGAATCTTGTAGAGGGAAACAAAGGGTGTTCTTCAATCAAACTCCAGCTCTCGATTGGATCGTGCGAGTTTGTGGACGGTGCG
AGAGATGTTAGAGACGAAGCCGGGCAGACACTAAGAGTTGCAATGGCGGAGAAGGCGTACGCGGAGGAAGCTAGACAGCAAGCCAAGCGGCAAGTAGAAATAGCGGAGCA
AGAATTCGCAAATGCCAAGAGAATGAGACAACAAGCACAAGCGGAGCTCGATAAAGCTATAGCGCTTAAACAAACCGCAATCAAACGGGTCAATTCAACTATTCTTGAAA
TCACTTGTCAAGCTTGCCAAAAGCAATTTCAAGCGAAAACAACAACAACTACAACAACAACAGCTGCATCGACTACTACTACAACAACGGCATCGTGCCGATCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGACATCTCCAGCAGCAATCCCAAACCCTCCAGCCGGCCGCATGTTTGTCCCAAACGGCATCGAGTCCAAGCCCATCCAGCGACACCAACATCAGCAGCGCACCCAA
TTGGGCAGCTCTCATAGCGCCACCCATTTCAAAGCCTCCGGACGCCAACAATAATGGCTCACCACACGATCACAATCTAGACCTCAAACTCTCAACTGGGTCGAATTCGA
ATTCGAATTCGAATCCGAATCCGAATCCGAATCTTGTAGAGGGAAACAAAGGGTGTTCTTCAATCAAACTCCAGCTCTCGATTGGATCGTGCGAGTTTGTGGACGGTGCG
AGAGATGTTAGAGACGAAGCCGGGCAGACACTAAGAGTTGCAATGGCGGAGAAGGCGTACGCGGAGGAAGCTAGACAGCAAGCCAAGCGGCAAGTAGAAATAGCGGAGCA
AGAATTCGCAAATGCCAAGAGAATGAGACAACAAGCACAAGCGGAGCTCGATAAAGCTATAGCGCTTAAACAAACCGCAATCAAACGGGTCAATTCAACTATTCTTGAAA
TCACTTGTCAAGCTTGCCAAAAGCAATTTCAAGCGAAAACAACAACAACTACAACAACAACAGCTGCATCGACTACTACTACAACAACGGCATCGTGCCGATCGTGA
Protein sequenceShow/hide protein sequence
MGHLQQQSQTLQPAACLSQTASSPSPSSDTNISSAPNWAALIAPPISKPPDANNNGSPHDHNLDLKLSTGSNSNSNSNPNPNPNLVEGNKGCSSIKLQLSIGSCEFVDGA
RDVRDEAGQTLRVAMAEKAYAEEARQQAKRQVEIAEQEFANAKRMRQQAQAELDKAIALKQTAIKRVNSTILEITCQACQKQFQAKTTTTTTTTAASTTTTTTASCRS