; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg07077 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg07077
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionBrother of ft and tfl
Genome locationCarg_Chr17:7680824..7682354
RNA-Seq ExpressionCarg07077
SyntenyCarg07077
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACL53534.1 unknown [Zea mays]5.9e-1529.44Show/hide
Query:  QVQNSDFSRILKGLSKWNLRQAAAQAAGIHPKGNHTHIVKRQSQKNILQVHRRPPSHEILQHCFQPRVHELHQRLHRHLSEPRRVKLNAGHLPLSLPRLI
        + +      +L+   + +L +A A+AA +H + +H H+V+ ++++++L+V          QH  Q  VH+LH+R  R  +E  RV+L AG   L  PRL+
Subjt:  QVQNSDFSRILKGLSKWNLRQAAAQAAGIHPKGNHTHIVKRQSQKNILQVHRRPPSHEILQHCFQPRVHELHQRLHRHLSEPRRVKLNAGHLPLSLPRLI

Query:  VSPEYSITEKVSHCVAEEWPFRVGRKFGLEKVLQVSGISSDYTIETTKPWASKLKRTLMTTEEVSNPFVEIPTCCCDQRR
        V  E ++ ++V H VAE        + GLE+VLQV+ +   + +E  +P   + +R     +   +P V +     +QRR
Subjt:  VSPEYSITEKVSHCVAEEWPFRVGRKFGLEKVLQVSGISSDYTIETTKPWASKLKRTLMTTEEVSNPFVEIPTCCCDQRR

CAA7391099.1 unnamed protein product [Spirodela intermedia]1.5e-1067.19Show/hide
Query:  SDRILSSTSGFRSSNQKNQLNATEDVSLPASMKLTQISLRNLSENGRPCSSLSLINTVGSLVLG
        S RI SST G R S+QKNQ +ATE+VSLPA MKLTQ+SLRNLSE G P SSLSL+  V    LG
Subjt:  SDRILSSTSGFRSSNQKNQLNATEDVSLPASMKLTQISLRNLSENGRPCSSLSLINTVGSLVLG

KAF5202499.1 Brother of ft and tfl [Thalictrum thalictroides]2.1e-0450.72Show/hide
Query:  QKNQLNATEDVSLPASMKLTQISLRNLSENGRPCSSLSLINTVGSLVLGLRLRRRGEFS--LPCLNHVL
        +KNQL+AT++VSLPA MK TQIS RNLSENG P SS +L+  V          +R +F+  LP  +H L
Subjt:  QKNQLNATEDVSLPASMKLTQISLRNLSENGRPCSSLSLINTVGSLVLGLRLRRRGEFS--LPCLNHVL

KAG6575716.1 hypothetical protein SDJN03_26355, partial [Cucurbita argyrosperma subsp. sororia]4.2e-2159.48Show/hide
Query:  ESFRLGIHRPPRPESDRILSSTSGFRSSNQKNQLNATEDVSLPASMKLTQISLRNLSENGRPCSSLSLINTVGSLVLGLRLRRRGEFSLPCLNHVLCKFV
        ESFRLGIHRPPRPESD                   A+E  +   S+ L    L N +E+ R        + VGSLVLGLRLRRRGEFSLPCLNHVLCKFV
Subjt:  ESFRLGIHRPPRPESDRILSSTSGFRSSNQKNQLNATEDVSLPASMKLTQISLRNLSENGRPCSSLSLINTVGSLVLGLRLRRRGEFSLPCLNHVLCKFV

Query:  DGLYRLLQLLLHSQVQ
        DGLYRLLQLLLHSQVQ
Subjt:  DGLYRLLQLLLHSQVQ

TrEMBL top hitse value%identityAlignment
A0A7I8K275 Hypothetical protein7.3e-1167.19Show/hide
Query:  SDRILSSTSGFRSSNQKNQLNATEDVSLPASMKLTQISLRNLSENGRPCSSLSLINTVGSLVLG
        S RI SST G R S+QKNQ +ATE+VSLPA MKLTQ+SLRNLSE G P SSLSL+  V    LG
Subjt:  SDRILSSTSGFRSSNQKNQLNATEDVSLPASMKLTQISLRNLSENGRPCSSLSLINTVGSLVLG

A0A7J6WYI6 Brother of ft and tfl1.0e-0450.72Show/hide
Query:  QKNQLNATEDVSLPASMKLTQISLRNLSENGRPCSSLSLINTVGSLVLGLRLRRRGEFS--LPCLNHVL
        +KNQL+AT++VSLPA MK TQIS RNLSENG P SS +L+  V          +R +F+  LP  +H L
Subjt:  QKNQLNATEDVSLPASMKLTQISLRNLSENGRPCSSLSLINTVGSLVLGLRLRRRGEFS--LPCLNHVL

B8A035 Uncharacterized protein2.9e-1529.44Show/hide
Query:  QVQNSDFSRILKGLSKWNLRQAAAQAAGIHPKGNHTHIVKRQSQKNILQVHRRPPSHEILQHCFQPRVHELHQRLHRHLSEPRRVKLNAGHLPLSLPRLI
        + +      +L+   + +L +A A+AA +H + +H H+V+ ++++++L+V          QH  Q  VH+LH+R  R  +E  RV+L AG   L  PRL+
Subjt:  QVQNSDFSRILKGLSKWNLRQAAAQAAGIHPKGNHTHIVKRQSQKNILQVHRRPPSHEILQHCFQPRVHELHQRLHRHLSEPRRVKLNAGHLPLSLPRLI

Query:  VSPEYSITEKVSHCVAEEWPFRVGRKFGLEKVLQVSGISSDYTIETTKPWASKLKRTLMTTEEVSNPFVEIPTCCCDQRR
        V  E ++ ++V H VAE        + GLE+VLQV+ +   + +E  +P   + +R     +   +P V +     +QRR
Subjt:  VSPEYSITEKVSHCVAEEWPFRVGRKFGLEKVLQVSGISSDYTIETTKPWASKLKRTLMTTEEVSNPFVEIPTCCCDQRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCCTTCACCACCGCCACCCGGTACCGGCTGATGATCGAGGCGGCGACGTATTTCATTTGATAGTACGCGAAATCCCTTCCCAGACACAGCCGAGGACCGCCGTTGA
AGGCGAATCGTTCCGTCTGGGAATACATCGTCCTCCACGACCTGAATCGGACAGAATTTTGTCCTCCACGTCGGGATTTCGATCGAGCAACCAGAAGAACCAACTCAATG
CGACGGAAGACGTGTCTCTTCCGGCGAGTATGAAATTGACGCAAATATCTCTGAGAAACTTGTCGGAGAATGGCCGCCCTTGCTCGTCTCTTAGCCTCATAAATACGGTC
GGATCTTTGGTTCTCGGCTTGCGGTTGCGCCGTCGTGGAGAGTTCTCTCTTCCGTGTTTGAATCACGTCCTCTGCAAATTCGTCGACGGCTTGTATCGATTGCTTCAGCT
TCTTCTCCACTCCCAAGTTCAGAACAGTGACTTCAGTCGCATCCTCAAAGGCCTTAGCAAATGGAATCTCCGGCAAGCCGCCGCGCAAGCAGCCGGGATCCACCCCAAAG
GCAATCATACACACATTGTCAAACGTCAATCTCAGAAGAACATCCTGCAGGTCCACCGCCGTCCTCCGTCCCACGAAATCCTCCAACACTGTTTCCAACCTCGAGTGCAC
GAGCTCCACCAGCGACTCCACCGTCATCTGTCGGAACCTCGCCGAGTGAAACTCAATGCTGGCCACCTTCCTCTGTCGTTGCCACGTCTCATCGTCAGCCCCGAATATTC
CATCACCGAGAAGGTCTCTCACTGTGTCGCGGAAGAATGGCCCTTTAGGGTAGGAAGGAAATTTGGTCTTGAGAAGGTGCTCCAAGTTTCGGGGATCAGCAGTGACTACA
CAATTGAGACTACTAAACCATGGGCCTCGAAATTGAAACGTACCCTTATGACGACGGAGGAGGTCAGTAATCCATTCGTAGAGATTCCCACGTGCTGCTGTGATCAGAGA
CGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCCTTCACCACCGCCACCCGGTACCGGCTGATGATCGAGGCGGCGACGTATTTCATTTGATAGTACGCGAAATCCCTTCCCAGACACAGCCGAGGACCGCCGTTGA
AGGCGAATCGTTCCGTCTGGGAATACATCGTCCTCCACGACCTGAATCGGACAGAATTTTGTCCTCCACGTCGGGATTTCGATCGAGCAACCAGAAGAACCAACTCAATG
CGACGGAAGACGTGTCTCTTCCGGCGAGTATGAAATTGACGCAAATATCTCTGAGAAACTTGTCGGAGAATGGCCGCCCTTGCTCGTCTCTTAGCCTCATAAATACGGTC
GGATCTTTGGTTCTCGGCTTGCGGTTGCGCCGTCGTGGAGAGTTCTCTCTTCCGTGTTTGAATCACGTCCTCTGCAAATTCGTCGACGGCTTGTATCGATTGCTTCAGCT
TCTTCTCCACTCCCAAGTTCAGAACAGTGACTTCAGTCGCATCCTCAAAGGCCTTAGCAAATGGAATCTCCGGCAAGCCGCCGCGCAAGCAGCCGGGATCCACCCCAAAG
GCAATCATACACACATTGTCAAACGTCAATCTCAGAAGAACATCCTGCAGGTCCACCGCCGTCCTCCGTCCCACGAAATCCTCCAACACTGTTTCCAACCTCGAGTGCAC
GAGCTCCACCAGCGACTCCACCGTCATCTGTCGGAACCTCGCCGAGTGAAACTCAATGCTGGCCACCTTCCTCTGTCGTTGCCACGTCTCATCGTCAGCCCCGAATATTC
CATCACCGAGAAGGTCTCTCACTGTGTCGCGGAAGAATGGCCCTTTAGGGTAGGAAGGAAATTTGGTCTTGAGAAGGTGCTCCAAGTTTCGGGGATCAGCAGTGACTACA
CAATTGAGACTACTAAACCATGGGCCTCGAAATTGAAACGTACCCTTATGACGACGGAGGAGGTCAGTAATCCATTCGTAGAGATTCCCACGTGCTGCTGTGATCAGAGA
CGGTAA
Protein sequenceShow/hide protein sequence
MPLHHRHPVPADDRGGDVFHLIVREIPSQTQPRTAVEGESFRLGIHRPPRPESDRILSSTSGFRSSNQKNQLNATEDVSLPASMKLTQISLRNLSENGRPCSSLSLINTV
GSLVLGLRLRRRGEFSLPCLNHVLCKFVDGLYRLLQLLLHSQVQNSDFSRILKGLSKWNLRQAAAQAAGIHPKGNHTHIVKRQSQKNILQVHRRPPSHEILQHCFQPRVH
ELHQRLHRHLSEPRRVKLNAGHLPLSLPRLIVSPEYSITEKVSHCVAEEWPFRVGRKFGLEKVLQVSGISSDYTIETTKPWASKLKRTLMTTEEVSNPFVEIPTCCCDQR
R